RNA–Protein interactions for RNA: ENST00000465057.5

CMTM1-207, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 797 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-207ENST00000465057 ATG9AQ7Z3C6 839 aa6.74□□□□□ -1.33
CMTM1-207ENST00000465057 TBC1D22AQ8WUA7 517 aa6.74□□□□□ -1.33
CMTM1-207ENST00000465057 WFDC12Q8WWY7 111 aa6.74□□□□□ -1.33
CMTM1-207ENST00000465057 BRI3BPQ8WY22 251 aa6.74□□□□□ -1.33
CMTM1-207ENST00000465057 WRNIP1Q96S55 665 aa6.74□□□□□ -1.33
CMTM1-207ENST00000465057 SSBP4Q9BWG4 385 aaPredicted RBP6.74□□□□□ -1.33
CMTM1-207ENST00000465057 CHRDQ9H2X0 955 aa6.74□□□□□ -1.33
CMTM1-207ENST00000465057 RWDD1Q9H446 243 aaPredicted RBP6.74□□□□□ -1.33
CMTM1-207ENST00000465057 ANO2Q9NQ90 1003 aa6.74□□□□□ -1.33
CMTM1-207ENST00000465057 TMOD2Q9NZR1 351 aa6.74□□□□□ -1.33
CMTM1-207ENST00000465057 PA2G4Q9UQ80 394 aaKnown RBP6.74□□□□□ -1.33
CMTM1-207ENST00000465057 CSADQ9Y600 493 aa6.74□□□□□ -1.33
CMTM1-207ENST00000465057 KIAA0100Q14667 2235 aaKnown RBP6.74□□□□□ -1.33
CMTM1-207ENST00000465057 MAST2Q6P0Q8 1798 aa6.74□□□□□ -1.33
CMTM1-207ENST00000465057 FOCADQ5VW36 1801 aa6.73□□□□□ -1.33
CMTM1-207ENST00000465057 RPAP1Q9BWH6 1393 aaPredicted RBP6.73□□□□□ -1.33
CMTM1-207ENST00000465057 A0A0U1RQG5 324 aaPredicted RBP6.73□□□□□ -1.33
CMTM1-207ENST00000465057 LINC01387J3KSC0 135 aa6.73□□□□□ -1.33
CMTM1-207ENST00000465057 IPO8O15397 1037 aaKnown RBP6.73□□□□□ -1.33
CMTM1-207ENST00000465057 MAP4K4O95819 1239 aaPredicted RBP6.73□□□□□ -1.33
CMTM1-207ENST00000465057 UBTFL1P0CB47 393 aaPredicted RBP6.73□□□□□ -1.33
CMTM1-207ENST00000465057 CDK11BP21127 795 aaKnown RBP6.73□□□□□ -1.33
CMTM1-207ENST00000465057 PRDX5P30044 214 aa6.73□□□□□ -1.33
CMTM1-207ENST00000465057 CDC27P30260 824 aa6.73□□□□□ -1.33
CMTM1-207ENST00000465057 NASPP49321 788 aaPredicted RBP6.73□□□□□ -1.33
CMTM1-207ENST00000465057 TAF1CQ15572 869 aaPredicted RBP6.73□□□□□ -1.33
CMTM1-207ENST00000465057 OTUD7BQ6GQQ9 843 aa6.73□□□□□ -1.33
CMTM1-207ENST00000465057 APOBEC3HQ6NTF7 200 aaKnown RBP6.73□□□□□ -1.33
CMTM1-207ENST00000465057 ADAMTSL4Q6UY14 1074 aa6.73□□□□□ -1.33
CMTM1-207ENST00000465057 MIGA2Q7L4E1 593 aa6.73□□□□□ -1.33
CMTM1-207ENST00000465057 TRMT2AQ8IZ69 625 aaKnown RBP6.73□□□□□ -1.33
CMTM1-207ENST00000465057 LPIN2Q92539 896 aa6.73□□□□□ -1.33
CMTM1-207ENST00000465057 ZKSCAN4Q969J2 545 aaPredicted RBP6.73□□□□□ -1.33
CMTM1-207ENST00000465057 ERO1AQ96HE7 468 aa6.73□□□□□ -1.33
CMTM1-207ENST00000465057 ZDHHC15Q96MV8 337 aa6.73□□□□□ -1.33
CMTM1-207ENST00000465057 TBC1D32Q96NH3 1257 aa6.73□□□□□ -1.33
CMTM1-207ENST00000465057 POP1Q99575 1024 aaKnown RBP6.73□□□□□ -1.33
CMTM1-207ENST00000465057 LACRTQ9GZZ8 138 aa6.73□□□□□ -1.33
CMTM1-207ENST00000465057 MRPL18Q9H0U6 180 aaKnown RBP6.73□□□□□ -1.33
CMTM1-207ENST00000465057 NOB1Q9ULX3 412 aaKnown RBP6.73□□□□□ -1.33
CMTM1-207ENST00000465057 LRRFIP2Q9Y608 721 aaKnown RBP6.73□□□□□ -1.33
CMTM1-207ENST00000465057 SNCAIPQ9Y6H5 919 aa6.73□□□□□ -1.33
CMTM1-207ENST00000465057 SIPA1L1O43166 1804 aa6.73□□□□□ -1.33
CMTM1-207ENST00000465057 MAST3O60307 1309 aa6.73□□□□□ -1.33
CMTM1-207ENST00000465057 SZT2Q5T011 3432 aa6.72□□□□□ -1.33
CMTM1-207ENST00000465057 DYRK3O43781 588 aa6.72□□□□□ -1.33
CMTM1-207ENST00000465057 ICMTO60725 284 aa6.72□□□□□ -1.33
CMTM1-207ENST00000465057 TNFRSF21O75509 655 aa6.72□□□□□ -1.33
CMTM1-207ENST00000465057 NOS3P29474 1203 aa6.72□□□□□ -1.33
CMTM1-207ENST00000465057 ADORA1P30542 326 aa6.72□□□□□ -1.33
CMTM1-207ENST00000465057 PHKA1P46020 1223 aa6.72□□□□□ -1.33
CMTM1-207ENST00000465057 GTF2A2P52657 109 aa6.72□□□□□ -1.33
CMTM1-207ENST00000465057 FGD1P98174 961 aa6.72□□□□□ -1.33
CMTM1-207ENST00000465057 SP3Q02447 781 aa6.72□□□□□ -1.33
CMTM1-207ENST00000465057 TCP10Q12799 353 aa6.72□□□□□ -1.33
CMTM1-207ENST00000465057 NFIAQ12857 509 aa6.72□□□□□ -1.33
CMTM1-207ENST00000465057 ATP2B3Q16720 1220 aa6.72□□□□□ -1.33
CMTM1-207ENST00000465057 FKBP1CQ5VVH2 108 aa6.72□□□□□ -1.33
CMTM1-207ENST00000465057 HHIPL2Q6UWX4 724 aa6.72□□□□□ -1.33
CMTM1-207ENST00000465057 FAM83AQ86UY5 434 aa6.72□□□□□ -1.33
CMTM1-207ENST00000465057 TMEM130Q8N3G9 435 aa6.72□□□□□ -1.33
CMTM1-207ENST00000465057 MEIS3Q99687 375 aa6.72□□□□□ -1.33
CMTM1-207ENST00000465057 GTPBP4Q9BZE4 634 aaKnown RBP6.72□□□□□ -1.33
CMTM1-207ENST00000465057 API5Q9BZZ5 524 aaKnown RBP6.72□□□□□ -1.33
CMTM1-207ENST00000465057 ARHGAP39Q9C0H5 1083 aa6.72□□□□□ -1.33
CMTM1-207ENST00000465057 ADAM19Q9H013 955 aa6.72□□□□□ -1.33
CMTM1-207ENST00000465057 CHMP4BQ9H444 224 aaKnown RBP6.72□□□□□ -1.33
CMTM1-207ENST00000465057 PTPN22Q9Y2R2 807 aa6.72□□□□□ -1.33
CMTM1-207ENST00000465057 DAGLAQ9Y4D2 1042 aa6.72□□□□□ -1.33
CMTM1-207ENST00000465057 DOCK3Q8IZD9 2030 aa6.71□□□□□ -1.33
CMTM1-207ENST00000465057 BTBD19C9JJ37 291 aa6.71□□□□□ -1.34
CMTM1-207ENST00000465057 LETM1O95202 739 aaPredicted RBP6.71□□□□□ -1.34
CMTM1-207ENST00000465057 KIF20AO95235 890 aa6.71□□□□□ -1.34
CMTM1-207ENST00000465057 H2AFB1P0C5Y9 115 aa6.71□□□□□ -1.34
CMTM1-207ENST00000465057 H2AFB2P0C5Z0 115 aa6.71□□□□□ -1.34
CMTM1-207ENST00000465057 PTPRAP18433 802 aa6.71□□□□□ -1.34
CMTM1-207ENST00000465057 HMGN5P82970 282 aaKnown RBP6.71□□□□□ -1.34
CMTM1-207ENST00000465057 ECM1Q16610 540 aa6.71□□□□□ -1.34
CMTM1-207ENST00000465057 CDC42EP5Q6NZY7 148 aa6.71□□□□□ -1.34
CMTM1-207ENST00000465057 SASS6Q6UVJ0 657 aa6.71□□□□□ -1.34
CMTM1-207ENST00000465057 ERO1BQ86YB8 467 aa6.71□□□□□ -1.34
CMTM1-207ENST00000465057 GJD3Q8N144 294 aa6.71□□□□□ -1.34
CMTM1-207ENST00000465057 WDR66Q8TBY9 1149 aa6.71□□□□□ -1.34
CMTM1-207ENST00000465057 TP53INP1Q96A56 240 aa6.71□□□□□ -1.34
CMTM1-207ENST00000465057 PPP1R9BQ96SB3 815 aa6.71□□□□□ -1.34
CMTM1-207ENST00000465057 ZNF341Q9BYN7 854 aa6.71□□□□□ -1.34
CMTM1-207ENST00000465057 ANTXR1Q9H6X2 564 aa6.71□□□□□ -1.34
CMTM1-207ENST00000465057 ZFYVE28Q9HCC9 887 aa6.71□□□□□ -1.34
CMTM1-207ENST00000465057 DZANK1Q9NVP4 752 aa6.71□□□□□ -1.34
CMTM1-207ENST00000465057 CCDC39Q9UFE4 941 aa6.71□□□□□ -1.34
CMTM1-207ENST00000465057 TNNQ9UQP3 1299 aa6.71□□□□□ -1.34
CMTM1-207ENST00000465057 GNEQ9Y223 722 aaKnown RBP6.71□□□□□ -1.34
CMTM1-207ENST00000465057 PTCH2Q9Y6C5 1203 aa6.71□□□□□ -1.34
CMTM1-207ENST00000465057 LOC285556D6RIA3 1793 aa6.71□□□□□ -1.34
CMTM1-207ENST00000465057 UQCRHLA0A096LP55 91 aa6.7□□□□□ -1.34
CMTM1-207ENST00000465057 EREGO14944 169 aa6.7□□□□□ -1.34
CMTM1-207ENST00000465057 PHACTR2O75167 634 aa6.7□□□□□ -1.34
CMTM1-207ENST00000465057 CIAO1O76071 339 aa6.7□□□□□ -1.34
CMTM1-207ENST00000465057 LDHBP07195 334 aaKnown RBP6.7□□□□□ -1.34
CMTM1-207ENST00000465057 UQCRHP07919 91 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms