RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 CXorf56Q9H5V9 222 aa13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 MCM9Q9NXL9 1143 aa13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 TFCP2L1Q9NZI6 479 aa13.92□□□□□ -0.18
CLCNKA-204ENST00000464764 COL5A2P05997 1499 aaPredicted RBP13.91□□□□□ -0.18
CLCNKA-204ENST00000464764 FAM170AA1A519 330 aa13.91□□□□□ -0.18
CLCNKA-204ENST00000464764 ERVV-1B6SEH8 477 aa13.91□□□□□ -0.18
CLCNKA-204ENST00000464764 LCA5LO95447 670 aa13.91□□□□□ -0.18
CLCNKA-204ENST00000464764 KIF5BP33176 963 aa13.91□□□□□ -0.18
CLCNKA-204ENST00000464764 TXKP42681 527 aa13.91□□□□□ -0.18
CLCNKA-204ENST00000464764 KCNMA1Q12791 1236 aa13.91□□□□□ -0.18
CLCNKA-204ENST00000464764 CENPPQ6IPU0 288 aa13.91□□□□□ -0.18
CLCNKA-204ENST00000464764 SLC44A5Q8NCS7 719 aa13.91□□□□□ -0.18
CLCNKA-204ENST00000464764 MYCBPAPQ8TBZ2 947 aa13.91□□□□□ -0.18
CLCNKA-204ENST00000464764 NSUN4Q96CB9 384 aaKnown RBP13.91□□□□□ -0.18
CLCNKA-204ENST00000464764 CABS1Q96KC9 395 aa13.91□□□□□ -0.18
CLCNKA-204ENST00000464764 C7orf25Q9BPX7 421 aa13.91□□□□□ -0.18
CLCNKA-204ENST00000464764 VAT1LQ9HCJ6 419 aa13.91□□□□□ -0.18
CLCNKA-204ENST00000464764 MAD2L2Q9UI95 211 aa13.91□□□□□ -0.18
CLCNKA-204ENST00000464764 NIP7Q9Y221 180 aaKnown RBP eCLIP13.91□□□□□ -0.18
CLCNKA-204ENST00000464764 PLAAQ9Y263 795 aa13.91□□□□□ -0.18
CLCNKA-204ENST00000464764 MYH3P11055 1940 aa13.91□□□□□ -0.18
CLCNKA-204ENST00000464764 RAD51CO43502 376 aa13.91□□□□□ -0.18
CLCNKA-204ENST00000464764 ORC4O43929 436 aa13.91□□□□□ -0.18
CLCNKA-204ENST00000464764 TMOD1P28289 359 aa13.91□□□□□ -0.18
CLCNKA-204ENST00000464764 SF3B2Q13435 895 aaKnown RBP13.91□□□□□ -0.18
CLCNKA-204ENST00000464764 CHADLQ6NUI6 762 aa13.91□□□□□ -0.18
CLCNKA-204ENST00000464764 CICQ96RK0 1608 aaPredicted RBP13.9□□□□□ -0.18
CLCNKA-204ENST00000464764 STXBP3O00186 592 aa13.9□□□□□ -0.18
CLCNKA-204ENST00000464764 OR52Z1P0C646 297 aa13.9□□□□□ -0.18
CLCNKA-204ENST00000464764 ACTN3Q08043 901 aaPredicted RBP13.9□□□□□ -0.18
CLCNKA-204ENST00000464764 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.9□□□□□ -0.18
CLCNKA-204ENST00000464764 BCCIPQ9P287 314 aaKnown RBP eCLIP13.9□□□□□ -0.18
CLCNKA-204ENST00000464764 PAPPAQ13219 1627 aa13.9□□□□□ -0.18
CLCNKA-204ENST00000464764 SSBP05455 408 aaKnown RBP eCLIP13.9□□□□□ -0.18
CLCNKA-204ENST00000464764 MDH1P40925 334 aaKnown RBP13.9□□□□□ -0.18
CLCNKA-204ENST00000464764 PDXDC1Q6P996 788 aa13.9□□□□□ -0.18
CLCNKA-204ENST00000464764 TBC1D5Q92609 795 aa13.9□□□□□ -0.18
CLCNKA-204ENST00000464764 CCDC47Q96A33 483 aaKnown RBP13.9□□□□□ -0.18
CLCNKA-204ENST00000464764 NUDT12Q9BQG2 462 aa13.9□□□□□ -0.18
CLCNKA-204ENST00000464764 STX8Q9UNK0 236 aa13.9□□□□□ -0.18
CLCNKA-204ENST00000464764 ZNF804BA4D1E1 1349 aa13.9□□□□□ -0.18
CLCNKA-204ENST00000464764 PJA2O43164 708 aa13.89□□□□□ -0.19
CLCNKA-204ENST00000464764 ATP2C2O75185 946 aa13.89□□□□□ -0.19
CLCNKA-204ENST00000464764 FSBPO95073 299 aa13.89□□□□□ -0.19
CLCNKA-204ENST00000464764 MYL1P05976 194 aa13.89□□□□□ -0.19
CLCNKA-204ENST00000464764 IL6STP40189 918 aaPredicted RBP13.89□□□□□ -0.19
CLCNKA-204ENST00000464764 PAK2Q13177 524 aa13.89□□□□□ -0.19
CLCNKA-204ENST00000464764 ITGB3BPQ13352 177 aaPredicted RBP13.89□□□□□ -0.19
CLCNKA-204ENST00000464764 HLTFQ14527 1009 aaKnown RBP eCLIP13.89□□□□□ -0.19
CLCNKA-204ENST00000464764 MAN2A1Q16706 1144 aa13.89□□□□□ -0.19
CLCNKA-204ENST00000464764 TMED8Q6PL24 325 aaPredicted RBP13.89□□□□□ -0.19
CLCNKA-204ENST00000464764 GJA10Q969M2 543 aa13.89□□□□□ -0.19
CLCNKA-204ENST00000464764 ATP6V1G3Q96LB4 118 aa13.89□□□□□ -0.19
CLCNKA-204ENST00000464764 LRRC4CQ9HCJ2 640 aa13.89□□□□□ -0.19
CLCNKA-204ENST00000464764 QPCTQ16769 361 aa13.89□□□□□ -0.19
CLCNKA-204ENST00000464764 CNNM4Q6P4Q7 775 aa13.89□□□□□ -0.19
CLCNKA-204ENST00000464764 BLOC1S4Q9NUP1 217 aa13.89□□□□□ -0.19
CLCNKA-204ENST00000464764 TMEM260Q9NX78 707 aa13.89□□□□□ -0.19
CLCNKA-204ENST00000464764 TBC1D7Q9P0N9 293 aa13.89□□□□□ -0.19
CLCNKA-204ENST00000464764 ADAMTS1Q9UHI8 967 aa13.89□□□□□ -0.19
CLCNKA-204ENST00000464764 TNFRSF8P28908 595 aa13.89□□□□□ -0.19
CLCNKA-204ENST00000464764 POLR2FP61218 127 aaKnown RBP13.89□□□□□ -0.19
CLCNKA-204ENST00000464764 CCDC13Q8IYE1 715 aa13.89□□□□□ -0.19
CLCNKA-204ENST00000464764 BIN2Q9UBW5 565 aaPredicted RBP13.89□□□□□ -0.19
CLCNKA-204ENST00000464764 TOGARAM1Q9Y4F4 1720 aa13.89□□□□□ -0.19
CLCNKA-204ENST00000464764 A0A087X0T9 212 aa13.88□□□□□ -0.19
CLCNKA-204ENST00000464764 NOL4O94818 638 aa13.88□□□□□ -0.19
CLCNKA-204ENST00000464764 FAM228BP0C875 321 aa13.88□□□□□ -0.19
CLCNKA-204ENST00000464764 FLT3P36888 993 aa13.88□□□□□ -0.19
CLCNKA-204ENST00000464764 GRB10Q13322 594 aa13.88□□□□□ -0.19
CLCNKA-204ENST00000464764 CAVIN4Q5BKX8 364 aa13.88□□□□□ -0.19
CLCNKA-204ENST00000464764 BRINP3Q76B58 766 aa13.88□□□□□ -0.19
CLCNKA-204ENST00000464764 KCNK18Q7Z418 384 aa13.88□□□□□ -0.19
CLCNKA-204ENST00000464764 AP1M1Q9BXS5 423 aa13.88□□□□□ -0.19
CLCNKA-204ENST00000464764 BARHL2Q9NY43 387 aa13.88□□□□□ -0.19
CLCNKA-204ENST00000464764 DCDC2CA8MYV0 355 aa13.88□□□□□ -0.19
CLCNKA-204ENST00000464764 NAPAP54920 295 aa13.88□□□□□ -0.19
CLCNKA-204ENST00000464764 ERVK-9P63128 1117 aa13.88□□□□□ -0.19
CLCNKA-204ENST00000464764 SMIM5Q71RC9 77 aa13.88□□□□□ -0.19
CLCNKA-204ENST00000464764 CADPS2Q86UW7 1296 aa13.88□□□□□ -0.19
CLCNKA-204ENST00000464764 ZKSCAN4Q969J2 545 aaPredicted RBP13.88□□□□□ -0.19
CLCNKA-204ENST00000464764 FGFBP2Q9BYJ0 223 aa13.88□□□□□ -0.19
CLCNKA-204ENST00000464764 CRNKL1Q9BZJ0 848 aaKnown RBP13.88□□□□□ -0.19
CLCNKA-204ENST00000464764 NEUROG2Q9H2A3 272 aa13.88□□□□□ -0.19
CLCNKA-204ENST00000464764 POTEMA6NI47 508 aa13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 CDC37Q16543 378 aaPredicted RBP13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 KIAA0753Q2KHM9 967 aa13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 GLE1Q53GS7 698 aaKnown RBP13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 FAM83BQ5T0W9 1011 aa13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 LRRC55Q6ZSA7 311 aa13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 SV2BQ7L1I2 683 aa13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 CCDC84Q86UT8 332 aaPredicted RBP13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 SLC51AQ86UW1 340 aa13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 SH3GLB2Q9NR46 395 aa13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 KLC4Q9NSK0 619 aa13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 NUP98P52948 1817 aa13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 SMCO2A6NFE2 343 aa13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 NTSR2O95665 410 aa13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 USP8P40818 1118 aa13.87□□□□□ -0.19
CLCNKA-204ENST00000464764 UAP1Q16222 522 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms