RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 SDE2Q6IQ49 451 aa6.06□□□□□ -1.44
CLK1-208ENST00000464454 SYDE1Q6ZW31 735 aaPredicted RBP6.06□□□□□ -1.44
CLK1-208ENST00000464454 TMC6Q7Z403 805 aa6.06□□□□□ -1.44
CLK1-208ENST00000464454 JAZF1Q86VZ6 243 aa6.06□□□□□ -1.44
CLK1-208ENST00000464454 TEX2Q8IWB9 1127 aa6.06□□□□□ -1.44
CLK1-208ENST00000464454 FAM177A1Q8N128 213 aaPredicted RBP6.06□□□□□ -1.44
CLK1-208ENST00000464454 LILRB2Q8N423 598 aa6.06□□□□□ -1.44
CLK1-208ENST00000464454 EXOC2Q96KP1 924 aa6.06□□□□□ -1.44
CLK1-208ENST00000464454 ALG1Q9BT22 464 aa6.06□□□□□ -1.44
CLK1-208ENST00000464454 MCOLN1Q9GZU1 580 aa6.06□□□□□ -1.44
CLK1-208ENST00000464454 PTCH2Q9Y6C5 1203 aa6.06□□□□□ -1.44
CLK1-208ENST00000464454 NFIBO00712 420 aa6.05□□□□□ -1.44
CLK1-208ENST00000464454 NTRK1P04629 796 aa6.05□□□□□ -1.44
CLK1-208ENST00000464454 TMEM253P0C7T8 217 aa6.05□□□□□ -1.44
CLK1-208ENST00000464454 GLDCP23378 1020 aa6.05□□□□□ -1.44
CLK1-208ENST00000464454 FPR2P25090 351 aa6.05□□□□□ -1.44
CLK1-208ENST00000464454 SLC6A11P48066 632 aa6.05□□□□□ -1.44
CLK1-208ENST00000464454 FOXB2Q5VYV0 432 aa6.05□□□□□ -1.44
CLK1-208ENST00000464454 LBX2Q6XYB7 198 aa6.05□□□□□ -1.44
CLK1-208ENST00000464454 NLRP10Q86W26 655 aa6.05□□□□□ -1.44
CLK1-208ENST00000464454 SEC14L1Q92503 715 aa6.05□□□□□ -1.44
CLK1-208ENST00000464454 KCNN1Q92952 543 aa6.05□□□□□ -1.44
CLK1-208ENST00000464454 KISS1RQ969F8 398 aaPredicted RBP6.05□□□□□ -1.44
CLK1-208ENST00000464454 TSPAN17Q96FV3 270 aa6.05□□□□□ -1.44
CLK1-208ENST00000464454 RNPC3Q96LT9 517 aaKnown RBP6.05□□□□□ -1.44
CLK1-208ENST00000464454 EPB41L1Q9H4G0 881 aa6.05□□□□□ -1.44
CLK1-208ENST00000464454 CLDND1Q9NY35 253 aa6.05□□□□□ -1.44
CLK1-208ENST00000464454 FBLN5Q9UBX5 448 aa6.05□□□□□ -1.44
CLK1-208ENST00000464454 MRPL42Q9Y6G3 142 aaKnown RBP6.05□□□□□ -1.44
CLK1-208ENST00000464454 MYOCOSA0A1B0GUC4 107 aa6.04□□□□□ -1.44
CLK1-208ENST00000464454 ZC3H12DA2A288 527 aaKnown RBP6.04□□□□□ -1.44
CLK1-208ENST00000464454 BLACEA4D250 179 aa6.04□□□□□ -1.44
CLK1-208ENST00000464454 EFCAB14O75071 495 aa6.04□□□□□ -1.44
CLK1-208ENST00000464454 TSPAN15O95858 294 aa6.04□□□□□ -1.44
CLK1-208ENST00000464454 ZNF648Q5T619 568 aaPredicted RBP6.04□□□□□ -1.44
CLK1-208ENST00000464454 SH3TC2Q8TF17 1288 aa6.04□□□□□ -1.44
CLK1-208ENST00000464454 TCAF2A6NFQ2 919 aa6.03□□□□□ -1.44
CLK1-208ENST00000464454 MAFKO60675 156 aa6.03□□□□□ -1.44
CLK1-208ENST00000464454 DGKIO75912 1065 aa6.03□□□□□ -1.44
CLK1-208ENST00000464454 CLSTN1O94985 981 aa6.03□□□□□ -1.44
CLK1-208ENST00000464454 C6orf222P0C671 652 aaPredicted RBP6.03□□□□□ -1.44
CLK1-208ENST00000464454 MED14OSP0DP75 135 aa6.03□□□□□ -1.44
CLK1-208ENST00000464454 GRK2P25098 689 aa6.03□□□□□ -1.44
CLK1-208ENST00000464454 GRK3P35626 688 aa6.03□□□□□ -1.44
CLK1-208ENST00000464454 PRR5P85299 388 aa6.03□□□□□ -1.44
CLK1-208ENST00000464454 TARBP2Q15633 366 aaKnown RBP6.03□□□□□ -1.44
CLK1-208ENST00000464454 KCNT2Q6UVM3 1135 aa6.03□□□□□ -1.44
CLK1-208ENST00000464454 MTDHQ86UE4 582 aaKnown RBP6.03□□□□□ -1.44
CLK1-208ENST00000464454 NLGN1Q8N2Q7 840 aa6.03□□□□□ -1.44
CLK1-208ENST00000464454 MRPL4Q9BYD3 311 aaKnown RBP6.03□□□□□ -1.44
CLK1-208ENST00000464454 MBD1Q9UIS9 605 aaPredicted RBP6.03□□□□□ -1.44
CLK1-208ENST00000464454 FBXL7Q9UJT9 491 aa6.03□□□□□ -1.44
CLK1-208ENST00000464454 FAM47E-STBD1D6RA91 191 aa6.02□□□□□ -1.45
CLK1-208ENST00000464454 ETV2O00321 342 aaPredicted RBP6.02□□□□□ -1.45
CLK1-208ENST00000464454 MSCO60682 206 aa6.02□□□□□ -1.45
CLK1-208ENST00000464454 PFKLP17858 780 aa6.02□□□□□ -1.45
CLK1-208ENST00000464454 HSD3B2P26439 372 aa6.02□□□□□ -1.45
CLK1-208ENST00000464454 DLG4P78352 724 aa6.02□□□□□ -1.45
CLK1-208ENST00000464454 TRIM61Q5EBN2 209 aa6.02□□□□□ -1.45
CLK1-208ENST00000464454 SYNPOQ8N3V7 929 aa6.02□□□□□ -1.45
CLK1-208ENST00000464454 RNF38Q9H0F5 515 aa6.02□□□□□ -1.45
CLK1-208ENST00000464454 TMEM260Q9NX78 707 aa6.02□□□□□ -1.45
CLK1-208ENST00000464454 SFMBT1Q9UHJ3 866 aa6.02□□□□□ -1.45
CLK1-208ENST00000464454 NUB1Q9Y5A7 615 aa6.02□□□□□ -1.45
CLK1-208ENST00000464454 KRIT1O00522 736 aa6.01□□□□□ -1.45
CLK1-208ENST00000464454 N4BP3O15049 544 aa6.01□□□□□ -1.45
CLK1-208ENST00000464454 SOD2P04179 222 aa6.01□□□□□ -1.45
CLK1-208ENST00000464454 RAP1GAPP47736 663 aa6.01□□□□□ -1.45
CLK1-208ENST00000464454 ZNF200P98182 395 aaPredicted RBP6.01□□□□□ -1.45
CLK1-208ENST00000464454 SPIRE1Q08AE8 756 aa6.01□□□□□ -1.45
CLK1-208ENST00000464454 PAK1Q13153 545 aa6.01□□□□□ -1.45
CLK1-208ENST00000464454 EMC4Q5J8M3 183 aa6.01□□□□□ -1.45
CLK1-208ENST00000464454 CYP4F22Q6NT55 531 aa6.01□□□□□ -1.45
CLK1-208ENST00000464454 HOMER1Q86YM7 354 aa6.01□□□□□ -1.45
CLK1-208ENST00000464454 PANK1Q8TE04 598 aa6.01□□□□□ -1.45
CLK1-208ENST00000464454 MZB1Q8WU39 189 aa6.01□□□□□ -1.45
CLK1-208ENST00000464454 ALG3Q92685 438 aa6.01□□□□□ -1.45
CLK1-208ENST00000464454 CNTD2Q9H8S5 307 aa6.01□□□□□ -1.45
CLK1-208ENST00000464454 KCNK12Q9HB15 430 aa6.01□□□□□ -1.45
CLK1-208ENST00000464454 NCOA5Q9HCD5 579 aaKnown RBP6.01□□□□□ -1.45
CLK1-208ENST00000464454 NDOR1Q9UHB4 597 aa6.01□□□□□ -1.45
CLK1-208ENST00000464454 ZNF652Q9Y2D9 606 aa6.01□□□□□ -1.45
CLK1-208ENST00000464454 TRAF6Q9Y4K3 522 aa6.01□□□□□ -1.45
CLK1-208ENST00000464454 ASXL2Q76L83 1435 aa6□□□□□ -1.45
CLK1-208ENST00000464454 ENPP3O14638 875 aa6□□□□□ -1.45
CLK1-208ENST00000464454 PLD2O14939 933 aa6□□□□□ -1.45
CLK1-208ENST00000464454 HGSO14964 777 aaPredicted RBP6□□□□□ -1.45
CLK1-208ENST00000464454 C8AP07357 584 aa6□□□□□ -1.45
CLK1-208ENST00000464454 NCAM1P13591 858 aa6□□□□□ -1.45
CLK1-208ENST00000464454 CDR1P51861 262 aa6□□□□□ -1.45
CLK1-208ENST00000464454 GUCY1A3Q02108 690 aa6□□□□□ -1.45
CLK1-208ENST00000464454 SQSTM1Q13501 440 aa6□□□□□ -1.45
CLK1-208ENST00000464454 EGFLAMQ63HQ2 1017 aa6□□□□□ -1.45
CLK1-208ENST00000464454 STEAP3Q658P3 488 aa6□□□□□ -1.45
CLK1-208ENST00000464454 ATG14Q6ZNE5 492 aa6□□□□□ -1.45
CLK1-208ENST00000464454 LDHDQ86WU2 507 aa6□□□□□ -1.45
CLK1-208ENST00000464454 GSTCDQ8NEC7 633 aa6□□□□□ -1.45
CLK1-208ENST00000464454 PHOSPHO1Q8TCT1 267 aa6□□□□□ -1.45
CLK1-208ENST00000464454 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6□□□□□ -1.45
CLK1-208ENST00000464454 APPBP2Q92624 585 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms