RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 SCAF8Q9UPN6 1271 aaKnown RBP24.33■■□□□ 1.49
PDLIM2-216ENST00000464275 PSMA7O14818 248 aa24.33■■□□□ 1.48
PDLIM2-216ENST00000464275 CYP3A4P08684 503 aa24.33■■□□□ 1.48
PDLIM2-216ENST00000464275 TAL1P17542 331 aaPredicted RBP24.33■■□□□ 1.48
PDLIM2-216ENST00000464275 KIF4BQ2VIQ3 1234 aa24.33■■□□□ 1.48
PDLIM2-216ENST00000464275 CNNM4Q6P4Q7 775 aa24.33■■□□□ 1.48
PDLIM2-216ENST00000464275 ZNF341Q9BYN7 854 aa24.33■■□□□ 1.48
PDLIM2-216ENST00000464275 ADD3Q9UEY8 706 aaKnown RBP24.33■■□□□ 1.48
PDLIM2-216ENST00000464275 MAPK8IP1Q9UQF2 711 aa24.33■■□□□ 1.48
PDLIM2-216ENST00000464275 MRPL11Q9Y3B7 192 aaKnown RBP24.33■■□□□ 1.48
PDLIM2-216ENST00000464275 PVALEFA0A1B0GWK0 134 aa24.32■■□□□ 1.48
PDLIM2-216ENST00000464275 PSDA5PKW4 1024 aaPredicted RBP24.32■■□□□ 1.48
PDLIM2-216ENST00000464275 CCP110O43303 1012 aa24.32■■□□□ 1.48
PDLIM2-216ENST00000464275 HOXA7P31268 230 aaPredicted RBP24.32■■□□□ 1.48
PDLIM2-216ENST00000464275 COBLL1Q53SF7 1204 aa24.32■■□□□ 1.48
PDLIM2-216ENST00000464275 PDCL2Q8N4E4 241 aa24.32■■□□□ 1.48
PDLIM2-216ENST00000464275 ANKRD20A12PQ8NF67 263 aa24.32■■□□□ 1.48
PDLIM2-216ENST00000464275 GJA10Q969M2 543 aa24.32■■□□□ 1.48
PDLIM2-216ENST00000464275 SBF1O95248 1867 aa24.32■■□□□ 1.48
PDLIM2-216ENST00000464275 ABCB11O95342 1321 aa24.31■■□□□ 1.48
PDLIM2-216ENST00000464275 RBBP6Q7Z6E9 1792 aaKnown RBP24.31■■□□□ 1.48
PDLIM2-216ENST00000464275 CTNND1O60716 968 aaKnown RBP24.31■■□□□ 1.48
PDLIM2-216ENST00000464275 HOXA13P31271 388 aaPredicted RBP24.31■■□□□ 1.48
PDLIM2-216ENST00000464275 CCT6AP40227 531 aaKnown RBP24.31■■□□□ 1.48
PDLIM2-216ENST00000464275 UNC13DQ70J99 1090 aa24.31■■□□□ 1.48
PDLIM2-216ENST00000464275 CCDC84Q86UT8 332 aaPredicted RBP24.31■■□□□ 1.48
PDLIM2-216ENST00000464275 ETNPPLQ8TBG4 499 aa24.31■■□□□ 1.48
PDLIM2-216ENST00000464275 PARP14Q460N5 1801 aa24.31■■□□□ 1.48
PDLIM2-216ENST00000464275 MYMKA6NI61 221 aa24.31■■□□□ 1.48
PDLIM2-216ENST00000464275 PRR16Q569H4 304 aa24.31■■□□□ 1.48
PDLIM2-216ENST00000464275 FAM20AQ96MK3 541 aa24.31■■□□□ 1.48
PDLIM2-216ENST00000464275 LRRC10BA6NIK2 292 aa24.3■■□□□ 1.48
PDLIM2-216ENST00000464275 GCOM1H8Y6P7 765 aaPredicted RBP24.3■■□□□ 1.48
PDLIM2-216ENST00000464275 WDR46O15213 610 aaKnown RBP24.3■■□□□ 1.48
PDLIM2-216ENST00000464275 COBLO75128 1261 aa24.3■■□□□ 1.48
PDLIM2-216ENST00000464275 POLR2MP0CAP2 368 aa24.3■■□□□ 1.48
PDLIM2-216ENST00000464275 NLGN2Q8NFZ4 835 aa24.3■■□□□ 1.48
PDLIM2-216ENST00000464275 LPAR1Q92633 364 aa24.3■■□□□ 1.48
PDLIM2-216ENST00000464275 DEFB129Q9H1M3 183 aa24.3■■□□□ 1.48
PDLIM2-216ENST00000464275 STK24Q9Y6E0 443 aa24.3■■□□□ 1.48
PDLIM2-216ENST00000464275 ASTN2O75129 1339 aaPredicted RBP24.3■■□□□ 1.48
PDLIM2-216ENST00000464275 ZNF541Q9H0D2 1346 aa24.3■■□□□ 1.48
PDLIM2-216ENST00000464275 ECM1Q16610 540 aa24.29■■□□□ 1.48
PDLIM2-216ENST00000464275 NOC3LQ8WTT2 800 aaKnown RBP24.29■■□□□ 1.48
PDLIM2-216ENST00000464275 LENG9Q96B70 501 aa24.29■■□□□ 1.48
PDLIM2-216ENST00000464275 KIAA1683Q9H0B3 1180 aa24.29■■□□□ 1.48
PDLIM2-216ENST00000464275 EHMT1Q9H9B1 1298 aa24.29■■□□□ 1.48
PDLIM2-216ENST00000464275 KCNJ18B7U540 433 aa24.29■■□□□ 1.48
PDLIM2-216ENST00000464275 CFBP00751 764 aa24.29■■□□□ 1.48
PDLIM2-216ENST00000464275 KCNJ12Q14500 433 aa24.29■■□□□ 1.48
PDLIM2-216ENST00000464275 KRT31Q15323 416 aa24.29■■□□□ 1.48
PDLIM2-216ENST00000464275 PTPN21Q16825 1174 aa24.29■■□□□ 1.48
PDLIM2-216ENST00000464275 TCP11X2Q5H9J9 407 aa24.29■■□□□ 1.48
PDLIM2-216ENST00000464275 KCNK18Q7Z418 384 aa24.29■■□□□ 1.48
PDLIM2-216ENST00000464275 TSC1Q92574 1164 aa24.29■■□□□ 1.48
PDLIM2-216ENST00000464275 TMX1Q9H3N1 280 aa24.29■■□□□ 1.48
PDLIM2-216ENST00000464275 THAP9Q9H5L6 903 aa24.29■■□□□ 1.48
PDLIM2-216ENST00000464275 FBXO28Q9NVF7 368 aa24.29■■□□□ 1.48
PDLIM2-216ENST00000464275 BICDL2A1A5D9 508 aa24.28■■□□□ 1.48
PDLIM2-216ENST00000464275 FAM86B1E9PN63 330 aa24.28■■□□□ 1.48
PDLIM2-216ENST00000464275 TEX33O43247 280 aa24.28■■□□□ 1.48
PDLIM2-216ENST00000464275 FAM86B2P0C5J1 330 aa24.28■■□□□ 1.48
PDLIM2-216ENST00000464275 CCNE1P24864 410 aa24.28■■□□□ 1.48
PDLIM2-216ENST00000464275 ZNF76P36508 570 aa24.28■■□□□ 1.48
PDLIM2-216ENST00000464275 PBX1P40424 430 aa24.28■■□□□ 1.48
PDLIM2-216ENST00000464275 STK4Q13043 487 aa24.28■■□□□ 1.48
PDLIM2-216ENST00000464275 DCAF15Q66K64 600 aa24.28■■□□□ 1.48
PDLIM2-216ENST00000464275 FCHSD1Q86WN1 690 aa24.28■■□□□ 1.48
PDLIM2-216ENST00000464275 KIF18AQ8NI77 898 aa24.28■■□□□ 1.48
PDLIM2-216ENST00000464275 TRIM49BA6NDI0 452 aa24.27■■□□□ 1.48
PDLIM2-216ENST00000464275 HAUS3Q68CZ6 603 aa24.27■■□□□ 1.48
PDLIM2-216ENST00000464275 LDHDQ86WU2 507 aa24.27■■□□□ 1.48
PDLIM2-216ENST00000464275 P2RX5Q93086 422 aa24.27■■□□□ 1.48
PDLIM2-216ENST00000464275 HOOK2Q96ED9 719 aa24.27■■□□□ 1.48
PDLIM2-216ENST00000464275 POLR2AP24928 1970 aaKnown RBP24.27■■□□□ 1.48
PDLIM2-216ENST00000464275 INPP5BP32019 993 aa24.27■■□□□ 1.48
PDLIM2-216ENST00000464275 COPB1P53618 953 aaKnown RBP24.27■■□□□ 1.48
PDLIM2-216ENST00000464275 SPIRE1Q08AE8 756 aa24.27■■□□□ 1.48
PDLIM2-216ENST00000464275 NCBP1Q09161 790 aaKnown RBP24.27■■□□□ 1.48
PDLIM2-216ENST00000464275 TTI2Q6NXR4 508 aa24.27■■□□□ 1.48
PDLIM2-216ENST00000464275 APOBEC3FQ8IUX4 373 aaKnown RBP24.27■■□□□ 1.48
PDLIM2-216ENST00000464275 SMAP1Q8IYB5 467 aaPredicted RBP24.27■■□□□ 1.48
PDLIM2-216ENST00000464275 ERMNQ8TAM6 284 aa24.27■■□□□ 1.48
PDLIM2-216ENST00000464275 TRIM47Q96LD4 638 aa24.27■■□□□ 1.48
PDLIM2-216ENST00000464275 PHIPQ8WWQ0 1821 aa24.26■■□□□ 1.47
PDLIM2-216ENST00000464275 FCER1AP12319 257 aa24.26■■□□□ 1.47
PDLIM2-216ENST00000464275 PMS1P54277 932 aaKnown RBP24.26■■□□□ 1.47
PDLIM2-216ENST00000464275 PSMD2Q13200 908 aa24.26■■□□□ 1.47
PDLIM2-216ENST00000464275 NBPF12Q5TAG4 269 aaPredicted RBP24.26■■□□□ 1.47
PDLIM2-216ENST00000464275 DYMQ7RTS9 669 aa24.26■■□□□ 1.47
PDLIM2-216ENST00000464275 PRPF38AQ8NAV1 312 aaKnown RBP24.26■■□□□ 1.47
PDLIM2-216ENST00000464275 TBC1D5Q92609 795 aa24.26■■□□□ 1.47
PDLIM2-216ENST00000464275 DDX12PQ92771 950 aa24.26■■□□□ 1.47
PDLIM2-216ENST00000464275 SLF1Q9BQI6 1058 aa24.26■■□□□ 1.47
PDLIM2-216ENST00000464275 CGNQ9P2M7 1197 aaKnown RBP24.26■■□□□ 1.47
PDLIM2-216ENST00000464275 MSH4O15457 936 aa24.25■■□□□ 1.47
PDLIM2-216ENST00000464275 ICAM1P05362 532 aa24.25■■□□□ 1.47
PDLIM2-216ENST00000464275 EEF1GP26641 437 aaKnown RBP24.25■■□□□ 1.47
PDLIM2-216ENST00000464275 SAMD1Q6SPF0 538 aaPredicted RBP24.25■■□□□ 1.47
PDLIM2-216ENST00000464275 UPF1Q92900 1129 aaKnown RBP eCLIP24.25■■□□□ 1.474e-7■■■■■ 26.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms