RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 DDX41Q9UJV9 622 aaKnown RBP14.97□□□□□ -0.01
XRN1-203ENST00000463916 A0A0U1RQG5 324 aaPredicted RBP14.96□□□□□ -0.01
XRN1-203ENST00000463916 A6NJR5 290 aa14.96□□□□□ -0.01
XRN1-203ENST00000463916 GOLGA8AA7E2F4 631 aa14.96□□□□□ -0.01
XRN1-203ENST00000463916 GOLGA8BA8MQT2 603 aa14.96□□□□□ -0.01
XRN1-203ENST00000463916 NKRFO15226 690 aaKnown RBP eCLIP14.96□□□□□ -0.01
XRN1-203ENST00000463916 EPB41L2O43491 1005 aaKnown RBP14.96□□□□□ -0.01
XRN1-203ENST00000463916 PURAQ00577 322 aaKnown RBP14.96□□□□□ -0.01
XRN1-203ENST00000463916 ARHGAP1Q07960 439 aa14.96□□□□□ -0.01
XRN1-203ENST00000463916 FBXL16Q8N461 479 aa14.96□□□□□ -0.01
XRN1-203ENST00000463916 PPP1R13LQ8WUF5 828 aa14.96□□□□□ -0.01
XRN1-203ENST00000463916 RBM28Q9NW13 759 aaKnown RBP14.96□□□□□ -0.01
XRN1-203ENST00000463916 NAP1L2Q9ULW6 460 aaPredicted RBP14.96□□□□□ -0.01
XRN1-203ENST00000463916 V9GY48 417 aaPredicted RBP14.96□□□□□ -0.01
XRN1-203ENST00000463916 KIAA0355O15063 1070 aa14.96□□□□□ -0.02
XRN1-203ENST00000463916 ZEB2O60315 1214 aa14.96□□□□□ -0.02
XRN1-203ENST00000463916 CPT1AP50416 773 aa14.96□□□□□ -0.02
XRN1-203ENST00000463916 MRPS9P82933 396 aaKnown RBP14.96□□□□□ -0.02
XRN1-203ENST00000463916 ITGA7Q13683 1181 aa14.96□□□□□ -0.02
XRN1-203ENST00000463916 TYW1BQ6NUM6 668 aa14.96□□□□□ -0.02
XRN1-203ENST00000463916 FAM126BQ8IXS8 530 aa14.96□□□□□ -0.02
XRN1-203ENST00000463916 LBHD1Q9BQE6 289 aaPredicted RBP14.96□□□□□ -0.02
XRN1-203ENST00000463916 ZSWIM6Q9HCJ5 1215 aa14.96□□□□□ -0.02
XRN1-203ENST00000463916 TMEM39AQ9NV64 488 aa14.96□□□□□ -0.02
XRN1-203ENST00000463916 DCDC2CA8MYV0 355 aa14.95□□□□□ -0.02
XRN1-203ENST00000463916 PIK3CDO00329 1044 aa14.95□□□□□ -0.02
XRN1-203ENST00000463916 SOX1O00570 391 aaPredicted RBP14.95□□□□□ -0.02
XRN1-203ENST00000463916 CABYRO75952 493 aa14.95□□□□□ -0.02
XRN1-203ENST00000463916 MYL3P08590 195 aa14.95□□□□□ -0.02
XRN1-203ENST00000463916 PSMA5P28066 241 aa14.95□□□□□ -0.02
XRN1-203ENST00000463916 SP2Q02086 613 aa14.95□□□□□ -0.02
XRN1-203ENST00000463916 WWC2Q6AWC2 1192 aa14.95□□□□□ -0.02
XRN1-203ENST00000463916 RUFY3Q7L099 469 aa14.95□□□□□ -0.02
XRN1-203ENST00000463916 HEATR3Q7Z4Q2 680 aa14.95□□□□□ -0.02
XRN1-203ENST00000463916 AFG1LQ8WV93 481 aa14.95□□□□□ -0.02
XRN1-203ENST00000463916 PSTPIP2Q9H939 334 aa14.95□□□□□ -0.02
XRN1-203ENST00000463916 MRVI1Q9Y6F6 885 aa14.95□□□□□ -0.02
XRN1-203ENST00000463916 FRMPD4Q14CM0 1322 aa14.95□□□□□ -0.02
XRN1-203ENST00000463916 A0A1W2PPC1 479 aa14.94□□□□□ -0.02
XRN1-203ENST00000463916 UBE2SQ16763 222 aa14.94□□□□□ -0.02
XRN1-203ENST00000463916 SMARCC2Q8TAQ2 1214 aa14.94□□□□□ -0.02
XRN1-203ENST00000463916 UPF3BQ9BZI7 483 aaKnown RBP14.94□□□□□ -0.02
XRN1-203ENST00000463916 BCAS3Q9H6U6 928 aa14.94□□□□□ -0.02
XRN1-203ENST00000463916 TBX21Q9UL17 535 aa14.94□□□□□ -0.02
XRN1-203ENST00000463916 SORBS3O60504 671 aa14.94□□□□□ -0.02
XRN1-203ENST00000463916 CD4P01730 458 aa14.94□□□□□ -0.02
XRN1-203ENST00000463916 CCND2P30279 289 aa14.94□□□□□ -0.02
XRN1-203ENST00000463916 METAP2P50579 478 aaKnown RBP eCLIP14.94□□□□□ -0.02
XRN1-203ENST00000463916 RCAN1P53805 252 aa14.94□□□□□ -0.02
XRN1-203ENST00000463916 TOB2Q14106 344 aaPredicted RBP14.94□□□□□ -0.02
XRN1-203ENST00000463916 TDHQ8IZJ6 230 aa14.94□□□□□ -0.02
XRN1-203ENST00000463916 LARP6Q9BRS8 491 aaKnown RBP14.94□□□□□ -0.02
XRN1-203ENST00000463916 TRPV6Q9H1D0 765 aa14.94□□□□□ -0.02
XRN1-203ENST00000463916 RTEL1Q9NZ71 1219 aa14.94□□□□□ -0.02
XRN1-203ENST00000463916 PPFIA3O75145 1194 aa14.93□□□□□ -0.02
XRN1-203ENST00000463916 GH1P01241 217 aa14.93□□□□□ -0.02
XRN1-203ENST00000463916 EPHB4P54760 987 aa14.93□□□□□ -0.02
XRN1-203ENST00000463916 CUL5Q93034 780 aa14.93□□□□□ -0.02
XRN1-203ENST00000463916 POLR3EQ9NVU0 708 aa14.93□□□□□ -0.02
XRN1-203ENST00000463916 MROH7Q68CQ1 1323 aa14.93□□□□□ -0.02
XRN1-203ENST00000463916 SLC34A2O95436 690 aa14.93□□□□□ -0.02
XRN1-203ENST00000463916 MMP3P08254 477 aa14.93□□□□□ -0.02
XRN1-203ENST00000463916 RAG1P15918 1043 aa14.93□□□□□ -0.02
XRN1-203ENST00000463916 EVCP57679 992 aa14.93□□□□□ -0.02
XRN1-203ENST00000463916 MTG1Q9BT17 334 aaPredicted RBP14.93□□□□□ -0.02
XRN1-203ENST00000463916 B4GALT4O60513 344 aa14.92□□□□□ -0.02
XRN1-203ENST00000463916 SEC24BO95487 1268 aa14.92□□□□□ -0.02
XRN1-203ENST00000463916 PDIA3P30101 505 aaKnown RBP14.92□□□□□ -0.02
XRN1-203ENST00000463916 SEMA3FQ13275 785 aa14.92□□□□□ -0.02
XRN1-203ENST00000463916 NTRK3Q16288 839 aa14.92□□□□□ -0.02
XRN1-203ENST00000463916 MYSM1Q5VVJ2 828 aa14.92□□□□□ -0.02
XRN1-203ENST00000463916 EMID1Q96A84 441 aaPredicted RBP14.92□□□□□ -0.02
XRN1-203ENST00000463916 LRCH3Q96II8 777 aa14.92□□□□□ -0.02
XRN1-203ENST00000463916 TM6SF1Q9BZW5 370 aa14.92□□□□□ -0.02
XRN1-203ENST00000463916 NCOA5Q9HCD5 579 aaKnown RBP14.92□□□□□ -0.02
XRN1-203ENST00000463916 CYP46A1Q9Y6A2 500 aa14.92□□□□□ -0.02
XRN1-203ENST00000463916 NID2Q14112 1375 aa14.92□□□□□ -0.02
XRN1-203ENST00000463916 MYH7BA7E2Y1 1941 aa14.92□□□□□ -0.02
XRN1-203ENST00000463916 STXBP3O00186 592 aa14.91□□□□□ -0.02
XRN1-203ENST00000463916 TIMP1P01033 207 aa14.91□□□□□ -0.02
XRN1-203ENST00000463916 UBA1P22314 1058 aaKnown RBP14.91□□□□□ -0.02
XRN1-203ENST00000463916 NBPF20Q3BBV1 942 aa14.91□□□□□ -0.02
XRN1-203ENST00000463916 HSDL1Q3SXM5 330 aa14.91□□□□□ -0.02
XRN1-203ENST00000463916 BRDTQ58F21 947 aaPredicted RBP14.91□□□□□ -0.02
XRN1-203ENST00000463916 C9orf50Q5SZB4 431 aa14.91□□□□□ -0.02
XRN1-203ENST00000463916 DHX37Q8IY37 1157 aaKnown RBP14.91□□□□□ -0.02
XRN1-203ENST00000463916 KAT2BQ92831 832 aa14.91□□□□□ -0.02
XRN1-203ENST00000463916 PHKBQ93100 1093 aa14.91□□□□□ -0.02
XRN1-203ENST00000463916 INPP4AQ96PE3 977 aaPredicted RBP14.91□□□□□ -0.02
XRN1-203ENST00000463916 ALDH8A1Q9H2A2 487 aaPredicted RBP14.91□□□□□ -0.02
XRN1-203ENST00000463916 TRMT13Q9NUP7 481 aaKnown RBP14.91□□□□□ -0.02
XRN1-203ENST00000463916 SCN10AQ9Y5Y9 1956 aa14.91□□□□□ -0.02
XRN1-203ENST00000463916 ADAMTS3O15072 1205 aa14.91□□□□□ -0.02
XRN1-203ENST00000463916 NAPAP54920 295 aa14.91□□□□□ -0.02
XRN1-203ENST00000463916 CCT2P78371 535 aaKnown RBP14.91□□□□□ -0.02
XRN1-203ENST00000463916 SHHQ15465 462 aa14.91□□□□□ -0.02
XRN1-203ENST00000463916 CELF3Q5SZQ8 465 aaKnown RBP14.91□□□□□ -0.02
XRN1-203ENST00000463916 PCNX4Q63HM2 1172 aa14.91□□□□□ -0.02
XRN1-203ENST00000463916 BARHL2Q9NY43 387 aa14.91□□□□□ -0.02
XRN1-203ENST00000463916 UMODL1Q5DID0 1318 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms