RNA–Protein interactions for RNA: ENST00000463094.5

MSH5-210, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-210ENST00000463094 RXRAP19793 462 aa22.96■■□□□ 1.27
MSH5-210ENST00000463094 LAMC2Q13753 1193 aa22.96■■□□□ 1.27
MSH5-210ENST00000463094 PGM5Q15124 567 aa22.96■■□□□ 1.27
MSH5-210ENST00000463094 DGKDQ16760 1214 aa22.96■■□□□ 1.27
MSH5-210ENST00000463094 GNPTABQ3T906 1256 aa22.96■■□□□ 1.27
MSH5-210ENST00000463094 PSRC1Q6PGN9 363 aaPredicted RBP22.96■■□□□ 1.27
MSH5-210ENST00000463094 MICU3Q86XE3 530 aa22.96■■□□□ 1.27
MSH5-210ENST00000463094 GRIN2DO15399 1336 aa22.95■■□□□ 1.26
MSH5-210ENST00000463094 CSF2RAP15509 400 aa22.95■■□□□ 1.26
MSH5-210ENST00000463094 CYP2C18P33260 490 aa22.95■■□□□ 1.26
MSH5-210ENST00000463094 SLC35G1Q2M3R5 365 aa22.95■■□□□ 1.26
MSH5-210ENST00000463094 NBPF20Q3BBV1 942 aa22.95■■□□□ 1.26
MSH5-210ENST00000463094 NFRKBQ6P4R8 1299 aa22.95■■□□□ 1.26
MSH5-210ENST00000463094 Q7L0L9 218 aa22.95■■□□□ 1.26
MSH5-210ENST00000463094 DHX32Q7L7V1 743 aaKnown RBP22.95■■□□□ 1.26
MSH5-210ENST00000463094 FANCBQ8NB91 859 aa22.95■■□□□ 1.26
MSH5-210ENST00000463094 DDX41Q9UJV9 622 aaKnown RBP22.95■■□□□ 1.26
MSH5-210ENST00000463094 NAP1L2Q9ULW6 460 aaPredicted RBP22.95■■□□□ 1.26
MSH5-210ENST00000463094 REC8O95072 547 aa22.94■■□□□ 1.26
MSH5-210ENST00000463094 MMP3P08254 477 aa22.94■■□□□ 1.26
MSH5-210ENST00000463094 SMAD3P84022 425 aaKnown RBP22.94■■□□□ 1.26
MSH5-210ENST00000463094 PTPN11Q06124 597 aaPredicted RBP22.94■■□□□ 1.26
MSH5-210ENST00000463094 ARHGAP1Q07960 439 aa22.94■■□□□ 1.26
MSH5-210ENST00000463094 VSIG10LQ86VR7 867 aa22.94■■□□□ 1.26
MSH5-210ENST00000463094 SGMS1Q86VZ5 419 aa22.94■■□□□ 1.26
MSH5-210ENST00000463094 CCDC82Q8N4S0 544 aa22.94■■□□□ 1.26
MSH5-210ENST00000463094 KATNAL1Q9BW62 490 aa22.94■■□□□ 1.26
MSH5-210ENST00000463094 RBM28Q9NW13 759 aaKnown RBP22.94■■□□□ 1.26
MSH5-210ENST00000463094 STAM2O75886 525 aa22.93■■□□□ 1.26
MSH5-210ENST00000463094 PLEKHA8P1O95397 391 aa22.93■■□□□ 1.26
MSH5-210ENST00000463094 TGFB3P10600 412 aa22.93■■□□□ 1.26
MSH5-210ENST00000463094 EPHB4P54760 987 aa22.93■■□□□ 1.26
MSH5-210ENST00000463094 FAM109BQ6ICB4 259 aaPredicted RBP22.93■■□□□ 1.26
MSH5-210ENST00000463094 RAB11FIP4Q86YS3 637 aa22.93■■□□□ 1.26
MSH5-210ENST00000463094 RPUSD2Q8IZ73 545 aaKnown RBP22.93■■□□□ 1.26
MSH5-210ENST00000463094 SRBD1Q8N5C6 995 aaKnown RBP22.93■■□□□ 1.26
MSH5-210ENST00000463094 ZBTB43O43298 467 aa22.92■■□□□ 1.26
MSH5-210ENST00000463094 CCL23P55773 120 aa22.92■■□□□ 1.26
MSH5-210ENST00000463094 TSGA10IPQ3SY00 556 aa22.92■■□□□ 1.26
MSH5-210ENST00000463094 CMTR1Q8N1G2 835 aaKnown RBP22.92■■□□□ 1.26
MSH5-210ENST00000463094 RETREG2Q8NC44 543 aa22.92■■□□□ 1.26
MSH5-210ENST00000463094 EMID1Q96A84 441 aaPredicted RBP22.92■■□□□ 1.26
MSH5-210ENST00000463094 NOC4LQ9BVI4 516 aaKnown RBP22.92■■□□□ 1.26
MSH5-210ENST00000463094 MLXIPQ9HAP2 919 aa22.92■■□□□ 1.26
MSH5-210ENST00000463094 IL23AQ9NPF7 189 aa22.92■■□□□ 1.26
MSH5-210ENST00000463094 TRMT13Q9NUP7 481 aaKnown RBP22.92■■□□□ 1.26
MSH5-210ENST00000463094 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.91■■□□□ 1.26
MSH5-210ENST00000463094 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.91■■□□□ 1.26
MSH5-210ENST00000463094 TMTC3Q6ZXV5 915 aa22.91■■□□□ 1.26
MSH5-210ENST00000463094 HEATR3Q7Z4Q2 680 aa22.91■■□□□ 1.26
MSH5-210ENST00000463094 CCDC155Q8N6L0 562 aa22.91■■□□□ 1.26
MSH5-210ENST00000463094 PPTC7Q8NI37 304 aa22.91■■□□□ 1.26
MSH5-210ENST00000463094 SPATA33Q96N06 139 aa22.91■■□□□ 1.26
MSH5-210ENST00000463094 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.91■■□□□ 1.262e-8■■□□□ 13.1
MSH5-210ENST00000463094 PSTPIP2Q9H939 334 aa22.91■■□□□ 1.26
MSH5-210ENST00000463094 GGPS1O95749 300 aa22.9■■□□□ 1.26
MSH5-210ENST00000463094 FGBP02675 491 aa22.9■■□□□ 1.26
MSH5-210ENST00000463094 ACRP10323 421 aa22.9■■□□□ 1.26
MSH5-210ENST00000463094 BFSP2Q13515 415 aa22.9■■□□□ 1.26
MSH5-210ENST00000463094 RTN1Q16799 776 aa22.9■■□□□ 1.26
MSH5-210ENST00000463094 APOA5Q6Q788 366 aa22.9■■□□□ 1.26
MSH5-210ENST00000463094 C7orf31Q8N865 590 aa22.9■■□□□ 1.26
MSH5-210ENST00000463094 FAM161BQ96MY7 647 aa22.9■■□□□ 1.26
MSH5-210ENST00000463094 EHMT1Q9H9B1 1298 aa22.9■■□□□ 1.26
MSH5-210ENST00000463094 MTMR10Q9NXD2 777 aa22.9■■□□□ 1.26
MSH5-210ENST00000463094 PIK3CDO00329 1044 aa22.89■■□□□ 1.25
MSH5-210ENST00000463094 NOP56O00567 594 aaKnown RBP22.89■■□□□ 1.25
MSH5-210ENST00000463094 CYP2C9P11712 490 aa22.89■■□□□ 1.25
MSH5-210ENST00000463094 TMEM240Q5SV17 173 aa22.89■■□□□ 1.25
MSH5-210ENST00000463094 CELF3Q5SZQ8 465 aaKnown RBP22.89■■□□□ 1.25
MSH5-210ENST00000463094 XRRA1Q6P2D8 792 aa22.89■■□□□ 1.25
MSH5-210ENST00000463094 USP17L6PQ6QN14 398 aa22.89■■□□□ 1.25
MSH5-210ENST00000463094 ZNF365Q70YC5 407 aa22.89■■□□□ 1.25
MSH5-210ENST00000463094 RASEFQ8IZ41 740 aa22.89■■□□□ 1.25
MSH5-210ENST00000463094 IL31RAQ8NI17 732 aa22.89■■□□□ 1.25
MSH5-210ENST00000463094 TCEANC2Q96MN5 208 aa22.89■■□□□ 1.25
MSH5-210ENST00000463094 KLF18A0A0U1RQI7 1052 aa22.88■■□□□ 1.25
MSH5-210ENST00000463094 SPDYE3A6NKU9 549 aa22.88■■□□□ 1.25
MSH5-210ENST00000463094 GOLGA8AA7E2F4 631 aa22.88■■□□□ 1.25
MSH5-210ENST00000463094 GOLGA8BA8MQT2 603 aa22.88■■□□□ 1.25
MSH5-210ENST00000463094 SORBS3O60504 671 aa22.88■■□□□ 1.25
MSH5-210ENST00000463094 EXOSC10Q01780 885 aaKnown RBP22.88■■□□□ 1.25
MSH5-210ENST00000463094 NEDD9Q14511 834 aa22.88■■□□□ 1.25
MSH5-210ENST00000463094 PTGISQ16647 500 aa22.88■■□□□ 1.25
MSH5-210ENST00000463094 ADCK5Q3MIX3 580 aa22.88■■□□□ 1.25
MSH5-210ENST00000463094 BLOC1S2Q6QNY1 142 aa22.88■■□□□ 1.25
MSH5-210ENST00000463094 NLRX1Q86UT6 975 aa22.88■■□□□ 1.25
MSH5-210ENST00000463094 JAKMIP1Q96N16 626 aaKnown RBP22.88■■□□□ 1.25
MSH5-210ENST00000463094 UMODL1Q5DID0 1318 aa22.87■■□□□ 1.25
MSH5-210ENST00000463094 CCDC196A0A1B0GTZ2 297 aa22.87■■□□□ 1.25
MSH5-210ENST00000463094 hCG_1642624A0A1W2PR95 340 aa22.87■■□□□ 1.25
MSH5-210ENST00000463094 FIBPO43427 364 aa22.87■■□□□ 1.25
MSH5-210ENST00000463094 PPFIA4O75335 1185 aa22.87■■□□□ 1.25
MSH5-210ENST00000463094 PFKMP08237 780 aa22.87■■□□□ 1.25
MSH5-210ENST00000463094 PSMA5P28066 241 aa22.87■■□□□ 1.25
MSH5-210ENST00000463094 MYSM1Q5VVJ2 828 aa22.87■■□□□ 1.25
MSH5-210ENST00000463094 ZFP91Q96JP5 570 aaPredicted RBP22.87■■□□□ 1.25
MSH5-210ENST00000463094 ALG1Q9BT22 464 aa22.87■■□□□ 1.25
MSH5-210ENST00000463094 RTEL1Q9NZ71 1219 aa22.87■■□□□ 1.25
MSH5-210ENST00000463094 STXBP5LQ9Y2K9 1186 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms