RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 LOC102724159A0A0B4J2E5 919 aa23.16■■□□□ 1.3
NUP43-205ENST00000463048 SORBS3O60504 671 aa23.16■■□□□ 1.3
NUP43-205ENST00000463048 FOSP01100 380 aaPredicted RBP23.16■■□□□ 1.3
NUP43-205ENST00000463048 TFRCP02786 760 aaKnown RBP23.16■■□□□ 1.3
NUP43-205ENST00000463048 AKR1A1P14550 325 aa23.16■■□□□ 1.3
NUP43-205ENST00000463048 MRPS9P82933 396 aaKnown RBP23.16■■□□□ 1.3
NUP43-205ENST00000463048 AP3B2Q13367 1082 aa23.16■■□□□ 1.3
NUP43-205ENST00000463048 PWP2Q15269 919 aaKnown RBP23.16■■□□□ 1.3
NUP43-205ENST00000463048 NPY5RQ15761 445 aa23.16■■□□□ 1.3
NUP43-205ENST00000463048 SPRYD3Q8NCJ5 442 aa23.16■■□□□ 1.3
NUP43-205ENST00000463048 U2AF1L4Q8WU68 220 aaKnown RBP23.16■■□□□ 1.3
NUP43-205ENST00000463048 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.16■■□□□ 1.3
NUP43-205ENST00000463048 FRMPD4Q14CM0 1322 aa23.15■■□□□ 1.3
NUP43-205ENST00000463048 EIF3JO75822 258 aaKnown RBP23.15■■□□□ 1.3
NUP43-205ENST00000463048 GJB1P08034 283 aa23.15■■□□□ 1.3
NUP43-205ENST00000463048 TNFAIP2Q03169 654 aa23.15■■□□□ 1.3
NUP43-205ENST00000463048 CUL4AQ13619 759 aa23.15■■□□□ 1.3
NUP43-205ENST00000463048 WDR11Q9BZH6 1224 aa23.15■■□□□ 1.3
NUP43-205ENST00000463048 RARBP10826 455 aa23.14■■□□□ 1.29
NUP43-205ENST00000463048 SMPD1P17405 629 aa23.14■■□□□ 1.29
NUP43-205ENST00000463048 EN2P19622 333 aaPredicted RBP23.14■■□□□ 1.29
NUP43-205ENST00000463048 KRT2P35908 639 aa23.14■■□□□ 1.29
NUP43-205ENST00000463048 NR5A1Q13285 461 aa23.14■■□□□ 1.29
NUP43-205ENST00000463048 PCNX4Q63HM2 1172 aa23.14■■□□□ 1.29
NUP43-205ENST00000463048 LHX8Q68G74 356 aa23.14■■□□□ 1.29
NUP43-205ENST00000463048 DAGLBQ8NCG7 672 aa23.14■■□□□ 1.29
NUP43-205ENST00000463048 RGS20O76081 388 aa23.13■■□□□ 1.29
NUP43-205ENST00000463048 ARIH2O95376 493 aa23.13■■□□□ 1.29
NUP43-205ENST00000463048 SGPL1O95470 568 aa23.13■■□□□ 1.29
NUP43-205ENST00000463048 PGK1P00558 417 aa23.13■■□□□ 1.29
NUP43-205ENST00000463048 MMP1P03956 469 aa23.13■■□□□ 1.29
NUP43-205ENST00000463048 TXNP10599 105 aaKnown RBP23.13■■□□□ 1.29
NUP43-205ENST00000463048 ZNF76P36508 570 aa23.13■■□□□ 1.29
NUP43-205ENST00000463048 IRX5P78411 483 aaPredicted RBP23.13■■□□□ 1.29
NUP43-205ENST00000463048 ARHGAP4P98171 946 aa23.13■■□□□ 1.29
NUP43-205ENST00000463048 LY6KQ17RY6 165 aa23.13■■□□□ 1.29
NUP43-205ENST00000463048 GALNT17Q6IS24 598 aa23.13■■□□□ 1.29
NUP43-205ENST00000463048 COPS5Q92905 334 aa23.13■■□□□ 1.29
NUP43-205ENST00000463048 BRMS1Q9HCU9 246 aa23.13■■□□□ 1.29
NUP43-205ENST00000463048 XPNPEP3Q9NQH7 507 aa23.13■■□□□ 1.29
NUP43-205ENST00000463048 PKD2L1Q9P0L9 805 aa23.13■■□□□ 1.29
NUP43-205ENST00000463048 MRVI1Q9Y6F6 885 aa23.13■■□□□ 1.29
NUP43-205ENST00000463048 FRMPD3Q5JV73 1810 aa23.12■■□□□ 1.29
NUP43-205ENST00000463048 BTBD18B2RXH4 712 aa23.12■■□□□ 1.29
NUP43-205ENST00000463048 HSP90AA1P07900 732 aaKnown RBP23.12■■□□□ 1.29
NUP43-205ENST00000463048 SREBF1P36956 1147 aa23.12■■□□□ 1.29
NUP43-205ENST00000463048 IQSEC1Q6DN90 963 aa23.12■■□□□ 1.29
NUP43-205ENST00000463048 DIS3L2Q8IYB7 885 aaKnown RBP23.12■■□□□ 1.29
NUP43-205ENST00000463048 SCFD2Q8WU76 684 aa23.12■■□□□ 1.29
NUP43-205ENST00000463048 UIMC1Q96RL1 719 aa23.12■■□□□ 1.29
NUP43-205ENST00000463048 KIAA1217Q5T5P2 1943 aa23.12■■□□□ 1.29
NUP43-205ENST00000463048 CCDC194A0A1B0GVG4 234 aa23.11■■□□□ 1.29
NUP43-205ENST00000463048 FAM205CA6NFA0 338 aa23.11■■□□□ 1.29
NUP43-205ENST00000463048 M0R2N6 131 aa23.11■■□□□ 1.29
NUP43-205ENST00000463048 MSCO60682 206 aa23.11■■□□□ 1.29
NUP43-205ENST00000463048 GJA8P48165 433 aa23.11■■□□□ 1.29
NUP43-205ENST00000463048 TTLL4Q14679 1199 aa23.11■■□□□ 1.29
NUP43-205ENST00000463048 PIK3AP1Q6ZUJ8 805 aa23.11■■□□□ 1.29
NUP43-205ENST00000463048 CYP2W1Q8TAV3 490 aa23.11■■□□□ 1.29
NUP43-205ENST00000463048 TBCKQ8TEA7 893 aa23.11■■□□□ 1.29
NUP43-205ENST00000463048 KIF3AQ9Y496 699 aa23.11■■□□□ 1.29
NUP43-205ENST00000463048 MYH7BA7E2Y1 1941 aa23.1■■□□□ 1.29
NUP43-205ENST00000463048 DYNC1LI2O43237 492 aaPredicted RBP23.1■■□□□ 1.29
NUP43-205ENST00000463048 GNL2Q13823 731 aaKnown RBP23.1■■□□□ 1.29
NUP43-205ENST00000463048 SAFBQ15424 915 aaKnown RBP eCLIP23.1■■□□□ 1.29
NUP43-205ENST00000463048 INF2Q27J81 1249 aa23.1■■□□□ 1.29
NUP43-205ENST00000463048 EARS2Q5JPH6 523 aaKnown RBP23.1■■□□□ 1.29
NUP43-205ENST00000463048 MCTP2Q6DN12 878 aa23.1■■□□□ 1.29
NUP43-205ENST00000463048 KRT25Q7Z3Z0 450 aa23.1■■□□□ 1.29
NUP43-205ENST00000463048 TEX2Q8IWB9 1127 aa23.1■■□□□ 1.29
NUP43-205ENST00000463048 FAM177A1Q8N128 213 aaPredicted RBP23.1■■□□□ 1.29
NUP43-205ENST00000463048 FBXO18Q8NFZ0 1043 aa23.1■■□□□ 1.29
NUP43-205ENST00000463048 SYNRGQ9UMZ2 1314 aa23.09■■□□□ 1.29
NUP43-205ENST00000463048 RBM47A0AV96 593 aaKnown RBP23.09■■□□□ 1.29
NUP43-205ENST00000463048 MYADML2A6NDP7 307 aa23.09■■□□□ 1.29
NUP43-205ENST00000463048 ITGB5P18084 799 aa23.09■■□□□ 1.29
NUP43-205ENST00000463048 NONOQ15233 471 aaKnown RBP eCLIP23.09■■□□□ 1.29
NUP43-205ENST00000463048 GNPTABQ3T906 1256 aa23.09■■□□□ 1.29
NUP43-205ENST00000463048 DUSP28Q4G0W2 176 aa23.09■■□□□ 1.29
NUP43-205ENST00000463048 XRRA1Q6P2D8 792 aa23.09■■□□□ 1.29
NUP43-205ENST00000463048 TLK2Q86UE8 772 aa23.09■■□□□ 1.29
NUP43-205ENST00000463048 NLRX1Q86UT6 975 aa23.09■■□□□ 1.29
NUP43-205ENST00000463048 H3BQV1 296 aa23.08■■□□□ 1.29
NUP43-205ENST00000463048 DUSP11O75319 330 aaKnown RBP23.08■■□□□ 1.29
NUP43-205ENST00000463048 C6orf222P0C671 652 aaPredicted RBP23.08■■□□□ 1.29
NUP43-205ENST00000463048 BEX3Q00994 111 aa23.08■■□□□ 1.29
NUP43-205ENST00000463048 IFFO2Q5TF58 517 aa23.08■■□□□ 1.29
NUP43-205ENST00000463048 LARP1BQ659C4 914 aaKnown RBP23.08■■□□□ 1.29
NUP43-205ENST00000463048 MCTP1Q6DN14 999 aa23.08■■□□□ 1.29
NUP43-205ENST00000463048 OR6J1Q8NGC5 347 aa23.08■■□□□ 1.29
NUP43-205ENST00000463048 INPP4AQ96PE3 977 aaPredicted RBP23.08■■□□□ 1.29
NUP43-205ENST00000463048 MXRA8Q9BRK3 442 aa23.08■■□□□ 1.29
NUP43-205ENST00000463048 CRISPLD2Q9H0B8 497 aa23.08■■□□□ 1.29
NUP43-205ENST00000463048 AP5M1Q9H0R1 490 aa23.08■■□□□ 1.29
NUP43-205ENST00000463048 BCAS3Q9H6U6 928 aa23.08■■□□□ 1.29
NUP43-205ENST00000463048 DDX41Q9UJV9 622 aaKnown RBP23.08■■□□□ 1.29
NUP43-205ENST00000463048 OGDHLQ9ULD0 1010 aa23.08■■□□□ 1.29
NUP43-205ENST00000463048 GNEQ9Y223 722 aaKnown RBP23.08■■□□□ 1.29
NUP43-205ENST00000463048 UBIAD1Q9Y5Z9 338 aa23.08■■□□□ 1.29
NUP43-205ENST00000463048 STAM2O75886 525 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms