RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 ATP5JP18859 108 aa9.48□□□□□ -0.89
GARNL3-212ENST00000463005 BEX3Q00994 111 aa9.48□□□□□ -0.89
GARNL3-212ENST00000463005 SEMA3FQ13275 785 aa9.48□□□□□ -0.89
GARNL3-212ENST00000463005 TMEM67Q5HYA8 995 aa9.48□□□□□ -0.89
GARNL3-212ENST00000463005 GIMAP6Q6P9H5 292 aa9.48□□□□□ -0.89
GARNL3-212ENST00000463005 CXCL17Q6UXB2 119 aa9.48□□□□□ -0.89
GARNL3-212ENST00000463005 NOL8Q76FK4 1167 aaKnown RBP9.48□□□□□ -0.89
GARNL3-212ENST00000463005 RPAP2Q8IXW5 612 aaPredicted RBP9.48□□□□□ -0.89
GARNL3-212ENST00000463005 ZNF444Q8N0Y2 327 aaPredicted RBP9.48□□□□□ -0.89
GARNL3-212ENST00000463005 FAM133AQ8N9E0 248 aa9.48□□□□□ -0.89
GARNL3-212ENST00000463005 KIFC2Q96AC6 838 aa9.48□□□□□ -0.89
GARNL3-212ENST00000463005 FGD4Q96M96 766 aa9.48□□□□□ -0.89
GARNL3-212ENST00000463005 NUP88Q99567 741 aaPredicted RBP9.48□□□□□ -0.89
GARNL3-212ENST00000463005 NOC4LQ9BVI4 516 aaKnown RBP9.48□□□□□ -0.89
GARNL3-212ENST00000463005 ZNF287Q9HBT7 754 aa9.48□□□□□ -0.89
GARNL3-212ENST00000463005 RAVER2Q9HCJ3 691 aaKnown RBP9.48□□□□□ -0.89
GARNL3-212ENST00000463005 CLIP2Q9UDT6 1046 aa9.48□□□□□ -0.89
GARNL3-212ENST00000463005 GNEQ9Y223 722 aaKnown RBP9.48□□□□□ -0.89
GARNL3-212ENST00000463005 HCN4Q9Y3Q4 1203 aa9.48□□□□□ -0.89
GARNL3-212ENST00000463005 MUC3AQ02505 3323 aa9.48□□□□□ -0.89
GARNL3-212ENST00000463005 PALM3A6NDB9 673 aaPredicted RBP9.47□□□□□ -0.89
GARNL3-212ENST00000463005 KIF28PB7ZC32 967 aa9.47□□□□□ -0.89
GARNL3-212ENST00000463005 SMIM22K7EJ46 135 aa9.47□□□□□ -0.89
GARNL3-212ENST00000463005 DYNC1LI2O43237 492 aaPredicted RBP9.47□□□□□ -0.89
GARNL3-212ENST00000463005 HMMRO75330 724 aa9.47□□□□□ -0.89
GARNL3-212ENST00000463005 ACTN1P12814 892 aa9.47□□□□□ -0.89
GARNL3-212ENST00000463005 ATP2A2P16615 1042 aaKnown RBP9.47□□□□□ -0.89
GARNL3-212ENST00000463005 RASA1P20936 1047 aa9.47□□□□□ -0.89
GARNL3-212ENST00000463005 RABGGTBP53611 331 aa9.47□□□□□ -0.89
GARNL3-212ENST00000463005 CCL23P55773 120 aa9.47□□□□□ -0.89
GARNL3-212ENST00000463005 FSCN1Q16658 493 aaKnown RBP9.47□□□□□ -0.89
GARNL3-212ENST00000463005 TKFCQ3LXA3 575 aa9.47□□□□□ -0.89
GARNL3-212ENST00000463005 RETREG2Q8NC44 543 aa9.47□□□□□ -0.89
GARNL3-212ENST00000463005 PHOSPHO2Q8TCD6 241 aa9.47□□□□□ -0.89
GARNL3-212ENST00000463005 CCDC136Q96JN2 1154 aa9.47□□□□□ -0.89
GARNL3-212ENST00000463005 NECAB3Q96P71 396 aaPredicted RBP9.47□□□□□ -0.89
GARNL3-212ENST00000463005 HAUS7Q99871 368 aa9.47□□□□□ -0.89
GARNL3-212ENST00000463005 LRFN3Q9BTN0 628 aa9.47□□□□□ -0.89
GARNL3-212ENST00000463005 BOLA2Q9H3K6 86 aa9.47□□□□□ -0.89
GARNL3-212ENST00000463005 ACAD9Q9H845 621 aa9.47□□□□□ -0.89
GARNL3-212ENST00000463005 TFIP11Q9UBB9 837 aaKnown RBP9.47□□□□□ -0.89
GARNL3-212ENST00000463005 MTCH2Q9Y6C9 303 aa9.47□□□□□ -0.89
GARNL3-212ENST00000463005 GRIN2DO15399 1336 aa9.47□□□□□ -0.89
GARNL3-212ENST00000463005 TRIP12Q14669 1992 aaPredicted RBP9.46□□□□□ -0.89
GARNL3-212ENST00000463005 SCN5AQ14524 2016 aa9.46□□□□□ -0.89
GARNL3-212ENST00000463005 BDP1A6H8Y1 2624 aa9.46□□□□□ -0.89
GARNL3-212ENST00000463005 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.46□□□□□ -0.9
GARNL3-212ENST00000463005 CARNS1A5YM72 827 aa9.46□□□□□ -0.9
GARNL3-212ENST00000463005 B4GALT4O60513 344 aa9.46□□□□□ -0.9
GARNL3-212ENST00000463005 RFC2P35250 354 aa9.46□□□□□ -0.9
GARNL3-212ENST00000463005 CNTN2Q02246 1040 aa9.46□□□□□ -0.9
GARNL3-212ENST00000463005 TFF2Q03403 129 aa9.46□□□□□ -0.9
GARNL3-212ENST00000463005 LINC01559Q495D7 138 aa9.46□□□□□ -0.9
GARNL3-212ENST00000463005 TMEM31Q5JXX7 168 aa9.46□□□□□ -0.9
GARNL3-212ENST00000463005 NYAP1Q6ZVC0 841 aa9.46□□□□□ -0.9
GARNL3-212ENST00000463005 TLK2Q86UE8 772 aa9.46□□□□□ -0.9
GARNL3-212ENST00000463005 MICALL1Q8N3F8 863 aa9.46□□□□□ -0.9
GARNL3-212ENST00000463005 GMCL1P1Q8NEA9 526 aa9.46□□□□□ -0.9
GARNL3-212ENST00000463005 CHURC1Q8WUH1 139 aa9.46□□□□□ -0.9
GARNL3-212ENST00000463005 AGBL1Q96MI9 1066 aa9.46□□□□□ -0.9
GARNL3-212ENST00000463005 SLC9A7Q96T83 725 aa9.46□□□□□ -0.9
GARNL3-212ENST00000463005 TRPV6Q9H1D0 765 aa9.46□□□□□ -0.9
GARNL3-212ENST00000463005 WNT8AQ9H1J5 351 aa9.46□□□□□ -0.9
GARNL3-212ENST00000463005 EPHX3Q9H6B9 360 aa9.46□□□□□ -0.9
GARNL3-212ENST00000463005 ASTN1O14525 1302 aa9.46□□□□□ -0.9
GARNL3-212ENST00000463005 UMODL1Q5DID0 1318 aa9.46□□□□□ -0.9
GARNL3-212ENST00000463005 IGKV6D-41A0A0C4DH26 115 aa9.45□□□□□ -0.9
GARNL3-212ENST00000463005 MINDY4BA8MYZ0 360 aa9.45□□□□□ -0.9
GARNL3-212ENST00000463005 PLA2G6O60733 806 aa9.45□□□□□ -0.9
GARNL3-212ENST00000463005 TTLL1O95922 423 aa9.45□□□□□ -0.9
GARNL3-212ENST00000463005 BMP3P12645 472 aa9.45□□□□□ -0.9
GARNL3-212ENST00000463005 MYOGP15173 224 aa9.45□□□□□ -0.9
GARNL3-212ENST00000463005 SMPD1P17405 629 aa9.45□□□□□ -0.9
GARNL3-212ENST00000463005 KCNQ1P51787 676 aa9.45□□□□□ -0.9
GARNL3-212ENST00000463005 SLFNL1Q499Z3 407 aa9.45□□□□□ -0.9
GARNL3-212ENST00000463005 SLFN13Q68D06 897 aa9.45□□□□□ -0.9
GARNL3-212ENST00000463005 TAPT1Q6NXT6 567 aa9.45□□□□□ -0.9
GARNL3-212ENST00000463005 FAM160B2Q86V87 743 aa9.45□□□□□ -0.9
GARNL3-212ENST00000463005 STRBPQ96SI9 672 aaKnown RBP9.45□□□□□ -0.9
GARNL3-212ENST00000463005 PUS7LQ9H0K6 701 aaKnown RBP9.45□□□□□ -0.9
GARNL3-212ENST00000463005 ALDH8A1Q9H2A2 487 aaPredicted RBP9.45□□□□□ -0.9
GARNL3-212ENST00000463005 A1CFQ9NQ94 594 aaKnown RBP9.45□□□□□ -0.9
GARNL3-212ENST00000463005 PPP4R2Q9NY27 417 aa9.45□□□□□ -0.9
GARNL3-212ENST00000463005 MTMR4Q9NYA4 1195 aa9.45□□□□□ -0.9
GARNL3-212ENST00000463005 LMCD1Q9NZU5 365 aa9.45□□□□□ -0.9
GARNL3-212ENST00000463005 FCF1Q9Y324 198 aaKnown RBP9.45□□□□□ -0.9
GARNL3-212ENST00000463005 LOC102724159A0A0B4J2E5 919 aa9.44□□□□□ -0.9
GARNL3-212ENST00000463005 GSG1L2A8MUP6 293 aa9.44□□□□□ -0.9
GARNL3-212ENST00000463005 CA3P07451 260 aa9.44□□□□□ -0.9
GARNL3-212ENST00000463005 STAT2P52630 851 aa9.44□□□□□ -0.9
GARNL3-212ENST00000463005 PWP2Q15269 919 aaKnown RBP9.44□□□□□ -0.9
GARNL3-212ENST00000463005 DUSP28Q4G0W2 176 aa9.44□□□□□ -0.9
GARNL3-212ENST00000463005 KIAA1211Q6ZU35 1233 aa9.44□□□□□ -0.9
GARNL3-212ENST00000463005 PNMA1Q8ND90 353 aa9.44□□□□□ -0.9
GARNL3-212ENST00000463005 MORC4Q8TE76 937 aa9.44□□□□□ -0.9
GARNL3-212ENST00000463005 STAG1Q8WVM7 1258 aa9.44□□□□□ -0.9
GARNL3-212ENST00000463005 VWCEQ96DN2 955 aa9.44□□□□□ -0.9
GARNL3-212ENST00000463005 SCLYQ96I15 445 aa9.44□□□□□ -0.9
GARNL3-212ENST00000463005 TRERF1Q96PN7 1200 aa9.44□□□□□ -0.9
GARNL3-212ENST00000463005 VTA1Q9NP79 307 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms