RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 DNTTIP2Q5QJE6 756 aaKnown RBP20.44■□□□□ 0.86
ATPAF2-202ENST00000462733 FOXP1Q9H334 677 aaPredicted RBP20.44■□□□□ 0.86
ATPAF2-202ENST00000462733 PIK3CDO00329 1044 aa20.44■□□□□ 0.86
ATPAF2-202ENST00000462733 CLK2P49760 499 aaKnown RBP20.44■□□□□ 0.86
ATPAF2-202ENST00000462733 HSD17B4P51659 736 aa20.44■□□□□ 0.86
ATPAF2-202ENST00000462733 MAP2K1Q02750 393 aaPredicted RBP20.44■□□□□ 0.86
ATPAF2-202ENST00000462733 FMR1NBQ8N0W7 255 aaPredicted RBP20.44■□□□□ 0.86
ATPAF2-202ENST00000462733 LINC00301Q8NCQ3 95 aa20.44■□□□□ 0.86
ATPAF2-202ENST00000462733 MRFAP1L1Q96HT8 127 aa20.44■□□□□ 0.86
ATPAF2-202ENST00000462733 MMP19Q99542 508 aa20.44■□□□□ 0.86
ATPAF2-202ENST00000462733 TRIM5Q9C035 493 aa20.44■□□□□ 0.86
ATPAF2-202ENST00000462733 PDCL3Q9H2J4 239 aa20.44■□□□□ 0.86
ATPAF2-202ENST00000462733 CYP39A1Q9NYL5 469 aa20.44■□□□□ 0.86
ATPAF2-202ENST00000462733 PLXNB2O15031 1838 aa20.43■□□□□ 0.86
ATPAF2-202ENST00000462733 SPDYE3A6NKU9 549 aa20.43■□□□□ 0.86
ATPAF2-202ENST00000462733 MAPK4P31152 587 aa20.43■□□□□ 0.86
ATPAF2-202ENST00000462733 EARS2Q5JPH6 523 aaKnown RBP20.43■□□□□ 0.86
ATPAF2-202ENST00000462733 PIK3AP1Q6ZUJ8 805 aa20.43■□□□□ 0.86
ATPAF2-202ENST00000462733 SYTL5Q8TDW5 730 aaPredicted RBP20.43■□□□□ 0.86
ATPAF2-202ENST00000462733 TNFRSF25Q93038 417 aa20.43■□□□□ 0.86
ATPAF2-202ENST00000462733 PURBQ96QR8 312 aaKnown RBP20.43■□□□□ 0.86
ATPAF2-202ENST00000462733 BEGAINQ9BUH8 593 aa20.43■□□□□ 0.86
ATPAF2-202ENST00000462733 CFHR5Q9BXR6 569 aa20.43■□□□□ 0.86
ATPAF2-202ENST00000462733 FTOQ9C0B1 505 aaKnown RBP eCLIP20.43■□□□□ 0.86
ATPAF2-202ENST00000462733 NAT10Q9H0A0 1025 aaKnown RBP20.43■□□□□ 0.86
ATPAF2-202ENST00000462733 COL20A1Q9P218 1284 aa20.43■□□□□ 0.86
ATPAF2-202ENST00000462733 IVNS1ABPQ9Y6Y0 642 aa20.43■□□□□ 0.86
ATPAF2-202ENST00000462733 CCDC194A0A1B0GVG4 234 aa20.42■□□□□ 0.86
ATPAF2-202ENST00000462733 FAM205CA6NFA0 338 aa20.42■□□□□ 0.86
ATPAF2-202ENST00000462733 FCER1AP12319 257 aa20.42■□□□□ 0.86
ATPAF2-202ENST00000462733 U2AF2P26368 475 aaKnown RBP eCLIP20.42■□□□□ 0.862e-6■■□□□ 14
ATPAF2-202ENST00000462733 GTF2F1P35269 517 aaKnown RBP eCLIP20.42■□□□□ 0.86
ATPAF2-202ENST00000462733 KCTD2Q14681 263 aa20.42■□□□□ 0.86
ATPAF2-202ENST00000462733 STK38Q15208 465 aa20.42■□□□□ 0.86
ATPAF2-202ENST00000462733 MYSM1Q5VVJ2 828 aa20.42■□□□□ 0.86
ATPAF2-202ENST00000462733 GPR142Q7Z601 462 aa20.42■□□□□ 0.86
ATPAF2-202ENST00000462733 NOSTRINQ8IVI9 506 aa20.42■□□□□ 0.86
ATPAF2-202ENST00000462733 CEP57L1Q8IYX8 460 aa20.42■□□□□ 0.86
ATPAF2-202ENST00000462733 SPC24Q8NBT2 197 aa20.42■□□□□ 0.86
ATPAF2-202ENST00000462733 PCDHA7Q9UN72 937 aa20.42■□□□□ 0.86
ATPAF2-202ENST00000462733 NEMFO60524 1076 aa20.41■□□□□ 0.86
ATPAF2-202ENST00000462733 PRKCSHP14314 528 aaPredicted RBP20.41■□□□□ 0.86
ATPAF2-202ENST00000462733 GHRHRQ02643 423 aa20.41■□□□□ 0.86
ATPAF2-202ENST00000462733 PLEKHH3Q7Z736 793 aa20.41■□□□□ 0.86
ATPAF2-202ENST00000462733 ANO3Q9BYT9 981 aa20.41■□□□□ 0.86
ATPAF2-202ENST00000462733 MAP3K20Q9NYL2 800 aaKnown RBP20.41■□□□□ 0.86
ATPAF2-202ENST00000462733 PFASO15067 1338 aa20.41■□□□□ 0.86
ATPAF2-202ENST00000462733 PGK2P07205 417 aa20.41■□□□□ 0.86
ATPAF2-202ENST00000462733 AP3B2Q13367 1082 aa20.41■□□□□ 0.86
ATPAF2-202ENST00000462733 SF3A1Q15459 793 aaKnown RBP20.41■□□□□ 0.86
ATPAF2-202ENST00000462733 KRT25Q7Z3Z0 450 aa20.41■□□□□ 0.86
ATPAF2-202ENST00000462733 SAMD3Q8N6K7 520 aa20.41■□□□□ 0.86
ATPAF2-202ENST00000462733 SAGE1Q9NXZ1 904 aa20.41■□□□□ 0.86
ATPAF2-202ENST00000462733 TSKSQ9UJT2 592 aa20.41■□□□□ 0.86
ATPAF2-202ENST00000462733 MGAMO43451 1857 aa20.41■□□□□ 0.86
ATPAF2-202ENST00000462733 SPTLC2O15270 562 aa20.4■□□□□ 0.86
ATPAF2-202ENST00000462733 PTGS1P23219 599 aa20.4■□□□□ 0.86
ATPAF2-202ENST00000462733 SP3Q02447 781 aa20.4■□□□□ 0.86
ATPAF2-202ENST00000462733 UBE2Q2Q8WVN8 375 aa20.4■□□□□ 0.86
ATPAF2-202ENST00000462733 TAAR1Q96RJ0 339 aa20.4■□□□□ 0.86
ATPAF2-202ENST00000462733 BPIFA3Q9BQP9 254 aa20.4■□□□□ 0.86
ATPAF2-202ENST00000462733 PYCARDQ9ULZ3 195 aa20.4■□□□□ 0.86
ATPAF2-202ENST00000462733 MYH7BA7E2Y1 1941 aa20.4■□□□□ 0.86
ATPAF2-202ENST00000462733 LCTP09848 1927 aa20.39■□□□□ 0.86
ATPAF2-202ENST00000462733 POTEB2H3BUK9 544 aa20.39■□□□□ 0.86
ATPAF2-202ENST00000462733 FOSP01100 380 aaPredicted RBP20.39■□□□□ 0.86
ATPAF2-202ENST00000462733 PTPREP23469 700 aa20.39■□□□□ 0.86
ATPAF2-202ENST00000462733 UBXN2AP68543 259 aa20.39■□□□□ 0.86
ATPAF2-202ENST00000462733 CNTN2Q02246 1040 aa20.39■□□□□ 0.86
ATPAF2-202ENST00000462733 NONOQ15233 471 aaKnown RBP eCLIP20.39■□□□□ 0.86
ATPAF2-202ENST00000462733 INF2Q27J81 1249 aa20.39■□□□□ 0.86
ATPAF2-202ENST00000462733 C11orf57Q6ZUT1 292 aaPredicted RBP20.39■□□□□ 0.86
ATPAF2-202ENST00000462733 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.39■□□□□ 0.86
ATPAF2-202ENST00000462733 TEX2Q8IWB9 1127 aa20.39■□□□□ 0.86
ATPAF2-202ENST00000462733 DRC7Q8IY82 874 aa20.39■□□□□ 0.86
ATPAF2-202ENST00000462733 ARHGAP39Q9C0H5 1083 aa20.39■□□□□ 0.86
ATPAF2-202ENST00000462733 ZSWIM8A7E2V4 1837 aa20.39■□□□□ 0.85
ATPAF2-202ENST00000462733 GPR25O00155 361 aa20.39■□□□□ 0.85
ATPAF2-202ENST00000462733 STRNO43815 780 aa20.39■□□□□ 0.85
ATPAF2-202ENST00000462733 ATP2B1P20020 1258 aa20.39■□□□□ 0.85
ATPAF2-202ENST00000462733 ADORA2AP29274 412 aa20.39■□□□□ 0.85
ATPAF2-202ENST00000462733 CTGFP29279 349 aa20.39■□□□□ 0.85
ATPAF2-202ENST00000462733 LACTBP83111 547 aaPredicted RBP20.39■□□□□ 0.85
ATPAF2-202ENST00000462733 ANO1Q5XXA6 986 aa20.39■□□□□ 0.85
ATPAF2-202ENST00000462733 TBCKQ8TEA7 893 aa20.39■□□□□ 0.85
ATPAF2-202ENST00000462733 RMDN3Q96TC7 470 aa20.39■□□□□ 0.85
ATPAF2-202ENST00000462733 TNPO2O14787 897 aaKnown RBP20.38■□□□□ 0.85
ATPAF2-202ENST00000462733 CMA1P23946 247 aa20.38■□□□□ 0.85
ATPAF2-202ENST00000462733 PSMC4P43686 418 aa20.38■□□□□ 0.85
ATPAF2-202ENST00000462733 MCTP2Q6DN12 878 aa20.38■□□□□ 0.85
ATPAF2-202ENST00000462733 CCDC186Q7Z3E2 898 aa20.38■□□□□ 0.85
ATPAF2-202ENST00000462733 JMYQ8N9B5 988 aa20.38■□□□□ 0.85
ATPAF2-202ENST00000462733 MAF1Q9H063 256 aa20.38■□□□□ 0.85
ATPAF2-202ENST00000462733 WBP1LQ9NX94 342 aa20.38■□□□□ 0.85
ATPAF2-202ENST00000462733 BECN2A8MW95 431 aa20.37■□□□□ 0.85
ATPAF2-202ENST00000462733 EIF2AK2P19525 551 aaKnown RBP20.37■□□□□ 0.85
ATPAF2-202ENST00000462733 FCGRTP55899 365 aa20.37■□□□□ 0.85
ATPAF2-202ENST00000462733 GRB14Q14449 540 aa20.37■□□□□ 0.85
ATPAF2-202ENST00000462733 ARHGEF16Q5VV41 709 aa20.37■□□□□ 0.85
ATPAF2-202ENST00000462733 ABRAQ8N0Z2 381 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms