RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 VGLL4Q14135 290 aa16.26■□□□□ 0.19
HDAC6-213ENST00000462730 ZNF658Q5TYW1 1059 aaPredicted RBP16.26■□□□□ 0.19
HDAC6-213ENST00000462730 MOXD1Q6UVY6 613 aa16.26■□□□□ 0.19
HDAC6-213ENST00000462730 TMC6Q7Z403 805 aa16.26■□□□□ 0.19
HDAC6-213ENST00000462730 SNX29Q8TEQ0 813 aa16.26■□□□□ 0.19
HDAC6-213ENST00000462730 CDK5RAP3Q96JB5 506 aa16.26■□□□□ 0.19
HDAC6-213ENST00000462730 MBOAT7Q96N66 472 aa16.26■□□□□ 0.19
HDAC6-213ENST00000462730 PNMA5Q96PV4 448 aa16.26■□□□□ 0.19
HDAC6-213ENST00000462730 ZNF18P17022 549 aa16.25■□□□□ 0.19
HDAC6-213ENST00000462730 SREBF1P36956 1147 aa16.25■□□□□ 0.19
HDAC6-213ENST00000462730 HMGCS2P54868 508 aa16.25■□□□□ 0.19
HDAC6-213ENST00000462730 SPATA1Q5VX52 437 aa16.25■□□□□ 0.19
HDAC6-213ENST00000462730 KRT79Q5XKE5 535 aa16.25■□□□□ 0.19
HDAC6-213ENST00000462730 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.25■□□□□ 0.19
HDAC6-213ENST00000462730 ZC3H15Q8WU90 426 aaKnown RBP16.25■□□□□ 0.19
HDAC6-213ENST00000462730 CACTINQ8WUQ7 758 aaKnown RBP16.25■□□□□ 0.19
HDAC6-213ENST00000462730 CRYGNQ8WXF5 182 aa16.25■□□□□ 0.19
HDAC6-213ENST00000462730 SNCAIPQ9Y6H5 919 aa16.25■□□□□ 0.19
HDAC6-213ENST00000462730 ZNF536O15090 1300 aa16.24■□□□□ 0.19
HDAC6-213ENST00000462730 PIK3CDO00329 1044 aa16.24■□□□□ 0.19
HDAC6-213ENST00000462730 KLRC4O43908 158 aa16.24■□□□□ 0.19
HDAC6-213ENST00000462730 PPP1R12BO60237 982 aaPredicted RBP16.24■□□□□ 0.19
HDAC6-213ENST00000462730 ICAM1P05362 532 aa16.24■□□□□ 0.19
HDAC6-213ENST00000462730 CDK11BP21127 795 aaKnown RBP16.24■□□□□ 0.19
HDAC6-213ENST00000462730 KCNB1Q14721 858 aa16.24■□□□□ 0.19
HDAC6-213ENST00000462730 KMT5BQ4FZB7 885 aa16.24■□□□□ 0.19
HDAC6-213ENST00000462730 EAPPQ56P03 285 aaPredicted RBP16.24■□□□□ 0.19
HDAC6-213ENST00000462730 LDHDQ86WU2 507 aa16.24■□□□□ 0.19
HDAC6-213ENST00000462730 UIMC1Q96RL1 719 aa16.24■□□□□ 0.19
HDAC6-213ENST00000462730 TAF1DQ9H5J8 278 aaPredicted RBP16.24■□□□□ 0.19
HDAC6-213ENST00000462730 KCNMB3Q9NPA1 279 aa16.24■□□□□ 0.19
HDAC6-213ENST00000462730 SAMSN1Q9NSI8 373 aaKnown RBP16.24■□□□□ 0.19
HDAC6-213ENST00000462730 STK17AQ9UEE5 414 aa16.24■□□□□ 0.19
HDAC6-213ENST00000462730 PPP1R9AQ9ULJ8 1098 aa16.24■□□□□ 0.19
HDAC6-213ENST00000462730 GDAQ9Y2T3 454 aa16.24■□□□□ 0.19
HDAC6-213ENST00000462730 ABCB11O95342 1321 aa16.24■□□□□ 0.19
HDAC6-213ENST00000462730 IQCA1LA6NCM1 817 aa16.24■□□□□ 0.19
HDAC6-213ENST00000462730 DHX8Q14562 1220 aaKnown RBP16.24■□□□□ 0.19
HDAC6-213ENST00000462730 ARID5BQ14865 1188 aa16.24■□□□□ 0.19
HDAC6-213ENST00000462730 FCHSD1Q86WN1 690 aa16.24■□□□□ 0.19
HDAC6-213ENST00000462730 CDCA5Q96FF9 252 aa16.24■□□□□ 0.19
HDAC6-213ENST00000462730 C12orf42Q96LP6 360 aa16.24■□□□□ 0.19
HDAC6-213ENST00000462730 C7orf25Q9BPX7 421 aa16.24■□□□□ 0.19
HDAC6-213ENST00000462730 IMPACTQ9P2X3 320 aa16.24■□□□□ 0.19
HDAC6-213ENST00000462730 CCPG1Q9ULG6 757 aa16.24■□□□□ 0.19
HDAC6-213ENST00000462730 PCDHA12Q9UN75 941 aa16.24■□□□□ 0.19
HDAC6-213ENST00000462730 MRPL11Q9Y3B7 192 aaKnown RBP16.24■□□□□ 0.19
HDAC6-213ENST00000462730 PTPRFP10586 1907 aa16.23■□□□□ 0.19
HDAC6-213ENST00000462730 RBBP6Q7Z6E9 1792 aaKnown RBP16.23■□□□□ 0.19
HDAC6-213ENST00000462730 CFBP00751 764 aa16.23■□□□□ 0.19
HDAC6-213ENST00000462730 ASIC1P78348 528 aa16.23■□□□□ 0.19
HDAC6-213ENST00000462730 MAP3K9P80192 1104 aa16.23■□□□□ 0.19
HDAC6-213ENST00000462730 AMPD3Q01432 767 aa16.23■□□□□ 0.19
HDAC6-213ENST00000462730 TMEM119Q4V9L6 283 aa16.23■□□□□ 0.19
HDAC6-213ENST00000462730 PRR16Q569H4 304 aa16.23■□□□□ 0.19
HDAC6-213ENST00000462730 ZNF710Q8N1W2 664 aa16.23■□□□□ 0.19
HDAC6-213ENST00000462730 AGBL1Q96MI9 1066 aa16.23■□□□□ 0.19
HDAC6-213ENST00000462730 ARID3AQ99856 593 aa16.23■□□□□ 0.19
HDAC6-213ENST00000462730 NUDT12Q9BQG2 462 aa16.23■□□□□ 0.19
HDAC6-213ENST00000462730 TRIM9Q9C026 710 aa16.23■□□□□ 0.19
HDAC6-213ENST00000462730 SLC38A10Q9HBR0 1119 aa16.23■□□□□ 0.19
HDAC6-213ENST00000462730 BLOC1S4Q9NUP1 217 aa16.23■□□□□ 0.19
HDAC6-213ENST00000462730 AFG3L2Q9Y4W6 797 aa16.23■□□□□ 0.19
HDAC6-213ENST00000462730 POTECB2RU33 542 aa16.22■□□□□ 0.19
HDAC6-213ENST00000462730 C19orf81C9J6K1 198 aa16.22■□□□□ 0.19
HDAC6-213ENST00000462730 GCOM1H8Y6P7 765 aaPredicted RBP16.22■□□□□ 0.19
HDAC6-213ENST00000462730 COBLO75128 1261 aa16.22■□□□□ 0.19
HDAC6-213ENST00000462730 POLR2MP0CAP2 368 aa16.22■□□□□ 0.19
HDAC6-213ENST00000462730 GSDMDP57764 484 aa16.22■□□□□ 0.19
HDAC6-213ENST00000462730 PDE4CQ08493 712 aa16.22■□□□□ 0.19
HDAC6-213ENST00000462730 PAK1Q13153 545 aa16.22■□□□□ 0.19
HDAC6-213ENST00000462730 MCM6Q14566 821 aa16.22■□□□□ 0.19
HDAC6-213ENST00000462730 Q4G0T1 1027 aa16.22■□□□□ 0.19
HDAC6-213ENST00000462730 SV2BQ7L1I2 683 aa16.22■□□□□ 0.19
HDAC6-213ENST00000462730 LRRC8AQ8IWT6 810 aa16.22■□□□□ 0.19
HDAC6-213ENST00000462730 SLFN12Q8IYM2 578 aa16.22■□□□□ 0.19
HDAC6-213ENST00000462730 NELFBQ8WX92 580 aa16.22■□□□□ 0.19
HDAC6-213ENST00000462730 TSC1Q92574 1164 aa16.22■□□□□ 0.19
HDAC6-213ENST00000462730 CCDC47Q96A33 483 aaKnown RBP16.22■□□□□ 0.19
HDAC6-213ENST00000462730 CCDC94Q9BW85 323 aaPredicted RBP16.22■□□□□ 0.19
HDAC6-213ENST00000462730 CSADQ9Y600 493 aa16.22■□□□□ 0.19
HDAC6-213ENST00000462730 RLFQ13129 1914 aa16.22■□□□□ 0.19
HDAC6-213ENST00000462730 RHOBTB3O94955 611 aa16.22■□□□□ 0.19
HDAC6-213ENST00000462730 NF2P35240 595 aa16.22■□□□□ 0.19
HDAC6-213ENST00000462730 IREB2P48200 963 aaKnown RBP16.22■□□□□ 0.19
HDAC6-213ENST00000462730 TPD52L1Q16890 204 aaPredicted RBP16.22■□□□□ 0.19
HDAC6-213ENST00000462730 TEX2Q8IWB9 1127 aa16.22■□□□□ 0.19
HDAC6-213ENST00000462730 ETNPPLQ8TBG4 499 aa16.22■□□□□ 0.19
HDAC6-213ENST00000462730 TBC1D5Q92609 795 aa16.22■□□□□ 0.19
HDAC6-213ENST00000462730 LARP4BQ92615 738 aaKnown RBP16.22■□□□□ 0.19
HDAC6-213ENST00000462730 RAD54LQ92698 747 aa16.22■□□□□ 0.19
HDAC6-213ENST00000462730 EXOC1Q9NV70 894 aa16.22■□□□□ 0.19
HDAC6-213ENST00000462730 RWDD2AQ9UIY3 292 aa16.22■□□□□ 0.19
HDAC6-213ENST00000462730 CIITAP33076 1130 aa16.21■□□□□ 0.19
HDAC6-213ENST00000462730 CCT6AP40227 531 aaKnown RBP16.21■□□□□ 0.19
HDAC6-213ENST00000462730 PRCPP42785 496 aa16.21■□□□□ 0.19
HDAC6-213ENST00000462730 SEMA3FQ13275 785 aa16.21■□□□□ 0.19
HDAC6-213ENST00000462730 CPXCR1Q8N123 301 aa16.21■□□□□ 0.19
HDAC6-213ENST00000462730 RAVER2Q9HCJ3 691 aaKnown RBP16.21■□□□□ 0.19
HDAC6-213ENST00000462730 INTS13Q9NVM9 706 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms