RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 PLAGL2Q9UPG8 496 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 SIK3Q9Y2K2 1263 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 ARIH1Q9Y4X5 557 aaPredicted RBP3.89□□□□□ -1.79
COL8A1-204ENST00000462604 CAPN6Q9Y6Q1 641 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 FAM169AQ9Y6X4 670 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 ARAP2Q8WZ64 1704 aa3.89□□□□□ -1.79
COL8A1-204ENST00000462604 LOC102724428A0A0B4J2F2 783 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 ESYT2A0FGR8 921 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 USP17L3A6NCW0 530 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 USP17L4A6NCW7 530 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 PALM3A6NDB9 673 aaPredicted RBP3.88□□□□□ -1.79
COL8A1-204ENST00000462604 SMCO2A6NFE2 343 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 MYMKA6NI61 221 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 UNCXA6NJT0 531 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 SRRM3A6NNA2 597 aaPredicted RBP3.88□□□□□ -1.79
COL8A1-204ENST00000462604 HMGB1P1B2RPK0 211 aaPredicted RBP3.88□□□□□ -1.79
COL8A1-204ENST00000462604 KLRF2D3W0D1 207 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 H0YHG0 523 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 RBAK-RBAKDNI3L0D1 243 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 CES2O00748 559 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 ZNF263O14978 683 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 ADAMTS3O15072 1205 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 SLC26A4O43511 780 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 NCK2O43639 380 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 ZEB2O60315 1214 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 PALMO75781 387 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 LDHBP07195 334 aaKnown RBP3.88□□□□□ -1.79
COL8A1-204ENST00000462604 LDHCP07864 332 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 FCER1AP12319 257 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 NR1D1P20393 614 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 GUCY2CP25092 1073 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 ANXA13P27216 316 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 SMARCA1P28370 1054 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 TECP42680 631 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 SLC1A4P43007 532 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 LIG3P49916 1009 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 FXR2P51116 673 aaKnown RBP eCLIP3.88□□□□□ -1.79
COL8A1-204ENST00000462604 CDR1P51861 262 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 NUBP1P53384 320 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 SIK1P57059 783 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 IRX3P78415 501 aaPredicted RBP3.88□□□□□ -1.79
COL8A1-204ENST00000462604 RASSF7Q02833 373 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 STK4Q13043 487 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 PDCLQ13371 301 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 EZH2Q15910 746 aaKnown RBP3.88□□□□□ -1.79
COL8A1-204ENST00000462604 ASIC2Q16515 512 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 IFI16Q16666 785 aaKnown RBP3.88□□□□□ -1.79
COL8A1-204ENST00000462604 TTMPQ5BVD1 217 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 C10orf76Q5T2E6 689 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 C12orf60Q5U649 245 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 KRT79Q5XKE5 535 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 PPP1R18Q6NYC8 613 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 USP17L1Q7RTZ2 530 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 KRT26Q7Z3Y9 468 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 MAATS1Q7Z4T9 603 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 CCDC91Q7Z6B0 441 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 MYOCDQ8IZQ8 938 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 REXO1Q8N1G1 1221 aaKnown RBP3.88□□□□□ -1.79
COL8A1-204ENST00000462604 STAG2Q8N3U4 1231 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 MREGQ8N565 214 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 ARFGAP2Q8N6H7 521 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 OTUD6BQ8N6M0 293 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 EIF1ADQ8N9N8 165 aaKnown RBP3.88□□□□□ -1.79
COL8A1-204ENST00000462604 TSEN2Q8NCE0 465 aaKnown RBP3.88□□□□□ -1.79
COL8A1-204ENST00000462604 KIAA0895Q8NCT3 520 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 C1orf131Q8NDD1 294 aaKnown RBP3.88□□□□□ -1.79
COL8A1-204ENST00000462604 WDR66Q8TBY9 1149 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 TBCKQ8TEA7 893 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 SNX29Q8TEQ0 813 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 SMCR8Q8TEV9 937 aaPredicted RBP3.88□□□□□ -1.79
COL8A1-204ENST00000462604 ZNF384Q8TF68 577 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 IFT81Q8WYA0 676 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 BAP1Q92560 729 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 LARP4BQ92615 738 aaKnown RBP3.88□□□□□ -1.79
COL8A1-204ENST00000462604 RAD54LQ92698 747 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 CEP63Q96MT8 703 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 CCDC43Q96MW1 224 aaKnown RBP3.88□□□□□ -1.79
COL8A1-204ENST00000462604 PSMB7Q99436 277 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 NAP1L4Q99733 375 aaKnown RBP3.88□□□□□ -1.79
COL8A1-204ENST00000462604 TMEM47Q9BQJ4 181 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 LRRC1Q9BTT6 524 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 LSM14BQ9BX40 385 aaKnown RBP3.88□□□□□ -1.79
COL8A1-204ENST00000462604 ZMYND12Q9H0C1 365 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 SEMA6BQ9H3T3 888 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 GOPCQ9HD26 462 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 GDF3Q9NR23 364 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 BMP2KQ9NSY1 1161 aaPredicted RBP3.88□□□□□ -1.79
COL8A1-204ENST00000462604 RBM12Q9NTZ6 932 aaKnown RBP3.88□□□□□ -1.79
COL8A1-204ENST00000462604 TFCP2L1Q9NZI6 479 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 ARHGAP20Q9P2F6 1191 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 STX8Q9UNK0 236 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 COL4A3BPQ9Y5P4 624 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 DUSP10Q9Y6W6 482 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 SLIT2O94813 1529 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 GRIN2DO15399 1336 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 KDM3AQ9Y4C1 1321 aa3.88□□□□□ -1.79
COL8A1-204ENST00000462604 TOGARAM1Q9Y4F4 1720 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 GOLGA6L7A0A1B0GV03 622 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 BTNL10A8MVZ5 291 aa3.87□□□□□ -1.79
COL8A1-204ENST00000462604 ANKRD65E5RJM6 399 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms