RNA–Protein interactions for RNA: ENST00000462260.1

PCOLCE-203, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 554 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-203ENST00000462260 CYP2C18P33260 490 aa15.86■□□□□ 0.13
PCOLCE-203ENST00000462260 SMAD3P84022 425 aaKnown RBP15.86■□□□□ 0.13
PCOLCE-203ENST00000462260 EXOSC10Q01780 885 aaKnown RBP15.86■□□□□ 0.13
PCOLCE-203ENST00000462260 NBPF20Q3BBV1 942 aa15.86■□□□□ 0.13
PCOLCE-203ENST00000462260 C16orf59Q7L2K0 433 aa15.86■□□□□ 0.13
PCOLCE-203ENST00000462260 RASEFQ8IZ41 740 aa15.86■□□□□ 0.13
PCOLCE-203ENST00000462260 IL31RAQ8NI17 732 aa15.86■□□□□ 0.13
PCOLCE-203ENST00000462260 AFG1LQ8WV93 481 aa15.86■□□□□ 0.13
PCOLCE-203ENST00000462260 PIBF1Q8WXW3 757 aa15.86■□□□□ 0.13
PCOLCE-203ENST00000462260 EMID1Q96A84 441 aaPredicted RBP15.86■□□□□ 0.13
PCOLCE-203ENST00000462260 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.86■□□□□ 0.13
PCOLCE-203ENST00000462260 NOC4LQ9BVI4 516 aaKnown RBP15.86■□□□□ 0.13
PCOLCE-203ENST00000462260 SLC12A7Q9Y666 1083 aa15.86■□□□□ 0.13
PCOLCE-203ENST00000462260 MRVI1Q9Y6F6 885 aa15.86■□□□□ 0.13
PCOLCE-203ENST00000462260 MMP3P08254 477 aa15.85■□□□□ 0.13
PCOLCE-203ENST00000462260 SUPT20HL2P0C7V6 817 aa15.85■□□□□ 0.13
PCOLCE-203ENST00000462260 MYCLP12524 364 aaPredicted RBP15.85■□□□□ 0.13
PCOLCE-203ENST00000462260 RXRAP19793 462 aa15.85■□□□□ 0.13
PCOLCE-203ENST00000462260 ADCK5Q3MIX3 580 aa15.85■□□□□ 0.13
PCOLCE-203ENST00000462260 TMEM240Q5SV17 173 aa15.85■□□□□ 0.13
PCOLCE-203ENST00000462260 NFRKBQ6P4R8 1299 aa15.85■□□□□ 0.13
PCOLCE-203ENST00000462260 FCHSD1Q86WN1 690 aa15.85■□□□□ 0.13
PCOLCE-203ENST00000462260 TRMT13Q9NUP7 481 aaKnown RBP15.85■□□□□ 0.13
PCOLCE-203ENST00000462260 FRMPD4Q14CM0 1322 aa15.85■□□□□ 0.13
PCOLCE-203ENST00000462260 UMODL1Q5DID0 1318 aa15.85■□□□□ 0.13
PCOLCE-203ENST00000462260 CCND2P30279 289 aa15.84■□□□□ 0.13
PCOLCE-203ENST00000462260 PTPN11Q06124 597 aaPredicted RBP15.84■□□□□ 0.13
PCOLCE-203ENST00000462260 LAMC2Q13753 1193 aa15.84■□□□□ 0.13
PCOLCE-203ENST00000462260 KCNV1Q6PIU1 500 aa15.84■□□□□ 0.13
PCOLCE-203ENST00000462260 DHX32Q7L7V1 743 aaKnown RBP15.84■□□□□ 0.13
PCOLCE-203ENST00000462260 CMTR1Q8N1G2 835 aaKnown RBP15.84■□□□□ 0.13
PCOLCE-203ENST00000462260 FANCBQ8NB91 859 aa15.84■□□□□ 0.13
PCOLCE-203ENST00000462260 SEC63Q9UGP8 760 aaKnown RBP15.84■□□□□ 0.13
PCOLCE-203ENST00000462260 MYH7BA7E2Y1 1941 aa15.84■□□□□ 0.13
PCOLCE-203ENST00000462260 PIK3CDO00329 1044 aa15.83■□□□□ 0.12
PCOLCE-203ENST00000462260 MEIS2O14770 477 aa15.83■□□□□ 0.12
PCOLCE-203ENST00000462260 ACRP10323 421 aa15.83■□□□□ 0.12
PCOLCE-203ENST00000462260 TGFB3P10600 412 aa15.83■□□□□ 0.12
PCOLCE-203ENST00000462260 KRT32Q14532 448 aa15.83■□□□□ 0.12
PCOLCE-203ENST00000462260 FAM47CQ5HY64 1035 aa15.83■□□□□ 0.12
PCOLCE-203ENST00000462260 RASIP1Q5U651 963 aa15.83■□□□□ 0.12
PCOLCE-203ENST00000462260 TMTC3Q6ZXV5 915 aa15.83■□□□□ 0.12
PCOLCE-203ENST00000462260 MICU3Q86XE3 530 aa15.83■□□□□ 0.12
PCOLCE-203ENST00000462260 RAB11FIP4Q86YS3 637 aa15.83■□□□□ 0.12
PCOLCE-203ENST00000462260 PPTC7Q8NI37 304 aa15.83■□□□□ 0.12
PCOLCE-203ENST00000462260 KAT2BQ92831 832 aa15.83■□□□□ 0.12
PCOLCE-203ENST00000462260 KCNB2Q92953 911 aa15.83■□□□□ 0.12
PCOLCE-203ENST00000462260 WNT8AQ9H1J5 351 aa15.83■□□□□ 0.12
PCOLCE-203ENST00000462260 IL23AQ9NPF7 189 aa15.83■□□□□ 0.12
PCOLCE-203ENST00000462260 STAM2O75886 525 aa15.82■□□□□ 0.12
PCOLCE-203ENST00000462260 CYP2C9P11712 490 aa15.82■□□□□ 0.12
PCOLCE-203ENST00000462260 HOXD8P13378 290 aaPredicted RBP15.82■□□□□ 0.12
PCOLCE-203ENST00000462260 CASTP20810 708 aaKnown RBP15.82■□□□□ 0.12
PCOLCE-203ENST00000462260 CCL23P55773 120 aa15.82■□□□□ 0.12
PCOLCE-203ENST00000462260 MRPS9P82933 396 aaKnown RBP15.82■□□□□ 0.12
PCOLCE-203ENST00000462260 SP2Q02086 613 aa15.82■□□□□ 0.12
PCOLCE-203ENST00000462260 DGKDQ16760 1214 aa15.82■□□□□ 0.12
PCOLCE-203ENST00000462260 CELF3Q5SZQ8 465 aaKnown RBP15.82■□□□□ 0.12
PCOLCE-203ENST00000462260 ZNF697Q5TEC3 545 aa15.82■□□□□ 0.12
PCOLCE-203ENST00000462260 MYSM1Q5VVJ2 828 aa15.82■□□□□ 0.12
PCOLCE-203ENST00000462260 PSRC1Q6PGN9 363 aaPredicted RBP15.82■□□□□ 0.12
PCOLCE-203ENST00000462260 APOA5Q6Q788 366 aa15.82■□□□□ 0.12
PCOLCE-203ENST00000462260 USP17L6PQ6QN14 398 aa15.82■□□□□ 0.12
PCOLCE-203ENST00000462260 ZNF365Q70YC5 407 aa15.82■□□□□ 0.12
PCOLCE-203ENST00000462260 SESTD1Q86VW0 696 aa15.82■□□□□ 0.12
PCOLCE-203ENST00000462260 DHX37Q8IY37 1157 aaKnown RBP15.82■□□□□ 0.12
PCOLCE-203ENST00000462260 PPP1R13LQ8WUF5 828 aa15.82■□□□□ 0.12
PCOLCE-203ENST00000462260 TCEANC2Q96MN5 208 aa15.82■□□□□ 0.12
PCOLCE-203ENST00000462260 STXBP5LQ9Y2K9 1186 aa15.82■□□□□ 0.12
PCOLCE-203ENST00000462260 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.81■□□□□ 0.12
PCOLCE-203ENST00000462260 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.81■□□□□ 0.12
PCOLCE-203ENST00000462260 UBA1P22314 1058 aaKnown RBP15.81■□□□□ 0.12
PCOLCE-203ENST00000462260 SYNE3Q6ZMZ3 975 aa15.81■□□□□ 0.12
PCOLCE-203ENST00000462260 CCDC82Q8N4S0 544 aa15.81■□□□□ 0.12
PCOLCE-203ENST00000462260 SMARCC2Q8TAQ2 1214 aa15.81■□□□□ 0.12
PCOLCE-203ENST00000462260 GPKOWQ92917 476 aaPredicted RBP eCLIP15.81■□□□□ 0.12
PCOLCE-203ENST00000462260 CUL5Q93034 780 aa15.81■□□□□ 0.12
PCOLCE-203ENST00000462260 VWCEQ96DN2 955 aa15.81■□□□□ 0.12
PCOLCE-203ENST00000462260 ZFP91Q96JP5 570 aaPredicted RBP15.81■□□□□ 0.12
PCOLCE-203ENST00000462260 GUCD1Q96NT3 240 aa15.81■□□□□ 0.12
PCOLCE-203ENST00000462260 INPP4AQ96PE3 977 aaPredicted RBP15.81■□□□□ 0.12
PCOLCE-203ENST00000462260 RBM28Q9NW13 759 aaKnown RBP15.81■□□□□ 0.12
PCOLCE-203ENST00000462260 BRPF3Q9ULD4 1205 aa15.81■□□□□ 0.12
PCOLCE-203ENST00000462260 CDH23Q9H251 3354 aa15.81■□□□□ 0.12
PCOLCE-203ENST00000462260 hCG_1642624A0A1W2PR95 340 aa15.8■□□□□ 0.12
PCOLCE-203ENST00000462260 GGPS1O95749 300 aa15.8■□□□□ 0.12
PCOLCE-203ENST00000462260 HMGB1P09429 215 aaKnown RBP15.8■□□□□ 0.12
PCOLCE-203ENST00000462260 ICAM3P32942 547 aa15.8■□□□□ 0.12
PCOLCE-203ENST00000462260 HSDL1Q3SXM5 330 aa15.8■□□□□ 0.12
PCOLCE-203ENST00000462260 HERVK_113Q902F9 699 aa15.8■□□□□ 0.12
PCOLCE-203ENST00000462260 SCLYQ96I15 445 aa15.8■□□□□ 0.12
PCOLCE-203ENST00000462260 SEMA6BQ9H3T3 888 aa15.8■□□□□ 0.12
PCOLCE-203ENST00000462260 PSTPIP2Q9H939 334 aa15.8■□□□□ 0.12
PCOLCE-203ENST00000462260 CNTNAP5Q8WYK1 1306 aa15.79■□□□□ 0.12
PCOLCE-203ENST00000462260 TMEM265A0A087WTH1 108 aa15.79■□□□□ 0.12
PCOLCE-203ENST00000462260 HAS3O00219 553 aa15.79■□□□□ 0.12
PCOLCE-203ENST00000462260 PITPNM1O00562 1244 aa15.79■□□□□ 0.12
PCOLCE-203ENST00000462260 ZBTB43O43298 467 aa15.79■□□□□ 0.12
PCOLCE-203ENST00000462260 PPFIA4O75335 1185 aa15.79■□□□□ 0.12
PCOLCE-203ENST00000462260 F2P00734 622 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms