RNA–Protein interactions for RNA: ENST00000462256.5

DDX39B-215, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 4,027 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-215ENST00000462256 ERLIN2O94905 339 aa10.4□□□□□ -0.75
DDX39B-215ENST00000462256 ARMCX2Q7L311 632 aa10.4□□□□□ -0.75
DDX39B-215ENST00000462256 SGMS1Q86VZ5 419 aa10.4□□□□□ -0.75
DDX39B-215ENST00000462256 DEPTORQ8TB45 409 aa10.4□□□□□ -0.75
DDX39B-215ENST00000462256 FAM212AQ96EL1 285 aa10.4□□□□□ -0.75
DDX39B-215ENST00000462256 SAGE1Q9NXZ1 904 aa10.4□□□□□ -0.75
DDX39B-215ENST00000462256 ZNF112Q9UJU3 913 aa10.4□□□□□ -0.75
DDX39B-215ENST00000462256 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.4□□□□□ -0.75
DDX39B-215ENST00000462256 POTECB2RU33 542 aa10.39□□□□□ -0.75
DDX39B-215ENST00000462256 MARCKSP29966 332 aaPredicted RBP10.39□□□□□ -0.75
DDX39B-215ENST00000462256 STRN3Q13033 797 aa10.39□□□□□ -0.75
DDX39B-215ENST00000462256 ACVR2BQ13705 512 aa10.39□□□□□ -0.75
DDX39B-215ENST00000462256 SASS6Q6UVJ0 657 aa10.39□□□□□ -0.75
DDX39B-215ENST00000462256 FBXO16Q8IX29 292 aaPredicted RBP10.39□□□□□ -0.75
DDX39B-215ENST00000462256 MKL1Q969V6 931 aa10.39□□□□□ -0.75
DDX39B-215ENST00000462256 ADPGKQ9BRR6 497 aa10.39□□□□□ -0.75
DDX39B-215ENST00000462256 ATRNL1Q5VV63 1379 aa10.39□□□□□ -0.75
DDX39B-215ENST00000462256 FSD2A1L4K1 749 aa10.39□□□□□ -0.75
DDX39B-215ENST00000462256 FOXN1O15353 648 aa10.39□□□□□ -0.75
DDX39B-215ENST00000462256 KPNA6O60684 536 aa10.39□□□□□ -0.75
DDX39B-215ENST00000462256 KRT76Q01546 638 aa10.39□□□□□ -0.75
DDX39B-215ENST00000462256 CYP4A11Q02928 519 aa10.39□□□□□ -0.75
DDX39B-215ENST00000462256 IWS1Q96ST2 819 aa10.39□□□□□ -0.75
DDX39B-215ENST00000462256 SLC38A10Q9HBR0 1119 aa10.39□□□□□ -0.75
DDX39B-215ENST00000462256 PTCH2Q9Y6C5 1203 aa10.39□□□□□ -0.75
DDX39B-215ENST00000462256 KDM3BQ7LBC6 1761 aa10.39□□□□□ -0.75
DDX39B-215ENST00000462256 COL1A1P02452 1464 aaPredicted RBP10.39□□□□□ -0.75
DDX39B-215ENST00000462256 BTBD18B2RXH4 712 aa10.39□□□□□ -0.75
DDX39B-215ENST00000462256 GABPAQ06546 454 aa10.39□□□□□ -0.75
DDX39B-215ENST00000462256 ME3Q16798 604 aa10.39□□□□□ -0.75
DDX39B-215ENST00000462256 XRRA1Q6P2D8 792 aa10.39□□□□□ -0.75
DDX39B-215ENST00000462256 SEPT1Q8WYJ6 367 aa10.39□□□□□ -0.75
DDX39B-215ENST00000462256 TAAR1Q96RJ0 339 aa10.39□□□□□ -0.75
DDX39B-215ENST00000462256 PLIN2Q99541 437 aa10.39□□□□□ -0.75
DDX39B-215ENST00000462256 VTA1Q9NP79 307 aa10.39□□□□□ -0.75
DDX39B-215ENST00000462256 MAGEC2Q9UBF1 373 aaPredicted RBP10.39□□□□□ -0.75
DDX39B-215ENST00000462256 TPCN1Q9ULQ1 816 aa10.39□□□□□ -0.75
DDX39B-215ENST00000462256 CACNA1FO60840 1977 aa10.39□□□□□ -0.75
DDX39B-215ENST00000462256 GOLGA6L19H0YKK7 550 aa10.38□□□□□ -0.75
DDX39B-215ENST00000462256 RFX1P22670 979 aa10.38□□□□□ -0.75
DDX39B-215ENST00000462256 TM4SF4P48230 202 aa10.38□□□□□ -0.75
DDX39B-215ENST00000462256 TFDP1Q14186 410 aa10.38□□□□□ -0.75
DDX39B-215ENST00000462256 TSR1Q2NL82 804 aaKnown RBP10.38□□□□□ -0.75
DDX39B-215ENST00000462256 PORCNQ9H237 461 aa10.38□□□□□ -0.75
DDX39B-215ENST00000462256 RNF216Q9NWF9 866 aaPredicted RBP10.38□□□□□ -0.75
DDX39B-215ENST00000462256 WDR64B1ANS9 1081 aa10.38□□□□□ -0.75
DDX39B-215ENST00000462256 NFIBO00712 420 aa10.38□□□□□ -0.75
DDX39B-215ENST00000462256 NKRFO15226 690 aaKnown RBP eCLIP10.38□□□□□ -0.75
DDX39B-215ENST00000462256 BFSP2Q13515 415 aa10.38□□□□□ -0.75
DDX39B-215ENST00000462256 PFKFB3Q16875 520 aaPredicted RBP10.38□□□□□ -0.75
DDX39B-215ENST00000462256 CEP55Q53EZ4 464 aa10.38□□□□□ -0.75
DDX39B-215ENST00000462256 CYFIP1Q7L576 1253 aa10.38□□□□□ -0.75
DDX39B-215ENST00000462256 CEP170P1Q96L14 293 aa10.38□□□□□ -0.75
DDX39B-215ENST00000462256 A1CFQ9NQ94 594 aaKnown RBP10.38□□□□□ -0.75
DDX39B-215ENST00000462256 NUP98P52948 1817 aa10.38□□□□□ -0.75
DDX39B-215ENST00000462256 PTMAP06454 111 aaKnown RBP10.38□□□□□ -0.75
DDX39B-215ENST00000462256 MTERF2Q49AM1 385 aa10.38□□□□□ -0.75
DDX39B-215ENST00000462256 DRC7Q8IY82 874 aa10.38□□□□□ -0.75
DDX39B-215ENST00000462256 CCDC150Q8NCX0 1101 aa10.38□□□□□ -0.75
DDX39B-215ENST00000462256 DNERQ8NFT8 737 aa10.38□□□□□ -0.75
DDX39B-215ENST00000462256 KCNG4Q8TDN1 519 aa10.38□□□□□ -0.75
DDX39B-215ENST00000462256 MICAL1Q8TDZ2 1067 aa10.38□□□□□ -0.75
DDX39B-215ENST00000462256 ZBED3Q96IU2 234 aaPredicted RBP10.38□□□□□ -0.75
DDX39B-215ENST00000462256 DTNBO60941 627 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 CNTN2Q02246 1040 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 TMEM132BQ14DG7 1078 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 TAF12Q16514 161 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 IQSEC1Q6DN90 963 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 HS2ST1Q7LGA3 356 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 SAMD3Q8N6K7 520 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 CNNM3Q8NE01 707 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 NLRP7Q8WX94 980 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 BARHL2Q9NY43 387 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 MAP3K20Q9NYL2 800 aaKnown RBP10.37□□□□□ -0.75
DDX39B-215ENST00000462256 SMARCA1P28370 1054 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 ASIC1P78348 528 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 DMTNQ08495 405 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 SH3D19Q5HYK7 790 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 PRAMEF19Q5SWL8 479 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 OTOP1Q7RTM1 612 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 SRBD1Q8N5C6 995 aaKnown RBP10.37□□□□□ -0.75
DDX39B-215ENST00000462256 IGDCC4Q8TDY8 1250 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 C12orf42Q96LP6 360 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 MAP3K14Q99558 947 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 SLC9A2Q9UBY0 812 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 LRRIQ4A6NIV6 560 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 INO80B-WBP1J3KQ70 363 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 IPO5O00410 1097 aaKnown RBP10.37□□□□□ -0.75
DDX39B-215ENST00000462256 PGK1P00558 417 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 OR52Z1P0C646 297 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 JAK3P52333 1124 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 RNASELQ05823 741 aaKnown RBP10.37□□□□□ -0.75
DDX39B-215ENST00000462256 SCRN1Q12765 414 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 PPFIA1Q13136 1202 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 STOX1Q6ZVD7 989 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 USP37Q86T82 979 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 TLK2Q86UE8 772 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 TSG101Q99816 390 aa10.37□□□□□ -0.75
DDX39B-215ENST00000462256 INO80BQ9C086 356 aaPredicted RBP10.37□□□□□ -0.75
DDX39B-215ENST00000462256 SMARCAD1Q9H4L7 1026 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms