RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 MAF1Q9H063 256 aa12.75□□□□□ -0.37
CBX3-205ENST00000462165 TOMM22Q9NS69 142 aa12.75□□□□□ -0.37
CBX3-205ENST00000462165 MICAL3Q7RTP6 2002 aa12.74□□□□□ -0.37
CBX3-205ENST00000462165 WDFY4Q6ZS81 3184 aa12.74□□□□□ -0.37
CBX3-205ENST00000462165 ZMYM6O95789 1325 aa12.74□□□□□ -0.37
CBX3-205ENST00000462165 SALL3Q9BXA9 1300 aa12.74□□□□□ -0.37
CBX3-205ENST00000462165 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.74□□□□□ -0.37
CBX3-205ENST00000462165 ABHD14A-ACY1A0A1B0GW23 586 aa12.74□□□□□ -0.37
CBX3-205ENST00000462165 NBNO60934 754 aa12.74□□□□□ -0.37
CBX3-205ENST00000462165 GJB5O95377 273 aa12.74□□□□□ -0.37
CBX3-205ENST00000462165 GH1P01241 217 aa12.74□□□□□ -0.37
CBX3-205ENST00000462165 FGAP02671 866 aa12.74□□□□□ -0.37
CBX3-205ENST00000462165 CKBP12277 381 aa12.74□□□□□ -0.37
CBX3-205ENST00000462165 CHMP4BP1P59074 171 aa12.74□□□□□ -0.37
CBX3-205ENST00000462165 DEFB103AP81534 67 aa12.74□□□□□ -0.37
CBX3-205ENST00000462165 ARHGAP1Q07960 439 aa12.74□□□□□ -0.37
CBX3-205ENST00000462165 TMCO2Q7Z6W1 182 aaPredicted RBP12.74□□□□□ -0.37
CBX3-205ENST00000462165 TGS1Q96RS0 853 aaKnown RBP12.74□□□□□ -0.37
CBX3-205ENST00000462165 RAD9AQ99638 391 aa12.74□□□□□ -0.37
CBX3-205ENST00000462165 ZBED2Q9BTP6 218 aa12.74□□□□□ -0.37
CBX3-205ENST00000462165 SUGCTQ9HAC7 445 aa12.74□□□□□ -0.37
CBX3-205ENST00000462165 CD320Q9NPF0 282 aa12.74□□□□□ -0.37
CBX3-205ENST00000462165 HELLSQ9NRZ9 838 aa12.74□□□□□ -0.37
CBX3-205ENST00000462165 GTF2IRD1Q9UHL9 959 aa12.74□□□□□ -0.37
CBX3-205ENST00000462165 LINC01553A4QN01 128 aa12.73□□□□□ -0.37
CBX3-205ENST00000462165 EFCAB14O75071 495 aa12.73□□□□□ -0.37
CBX3-205ENST00000462165 CASTP20810 708 aaKnown RBP12.73□□□□□ -0.37
CBX3-205ENST00000462165 LY6KQ17RY6 165 aa12.73□□□□□ -0.37
CBX3-205ENST00000462165 USH1GQ495M9 461 aa12.73□□□□□ -0.37
CBX3-205ENST00000462165 GPATCH4Q5T3I0 446 aaKnown RBP12.73□□□□□ -0.37
CBX3-205ENST00000462165 EVI5LQ96CN4 794 aa12.73□□□□□ -0.37
CBX3-205ENST00000462165 UBE2ZQ9H832 354 aaPredicted RBP12.73□□□□□ -0.37
CBX3-205ENST00000462165 C5orf42Q9H799 3197 aa12.72□□□□□ -0.37
CBX3-205ENST00000462165 FAM86C2PA6NEL3 165 aa12.72□□□□□ -0.37
CBX3-205ENST00000462165 PCP11498 1178 aaKnown RBP12.72□□□□□ -0.37
CBX3-205ENST00000462165 DGKDQ16760 1214 aa12.72□□□□□ -0.37
CBX3-205ENST00000462165 TCTN1Q2MV58 587 aa12.72□□□□□ -0.37
CBX3-205ENST00000462165 LEXMQ3ZCV2 418 aa12.72□□□□□ -0.37
CBX3-205ENST00000462165 TRAF7Q6Q0C0 670 aa12.72□□□□□ -0.37
CBX3-205ENST00000462165 SEPT14Q6ZU15 432 aa12.72□□□□□ -0.37
CBX3-205ENST00000462165 TBC1D5Q92609 795 aa12.72□□□□□ -0.37
CBX3-205ENST00000462165 TAAR1Q96RJ0 339 aa12.72□□□□□ -0.37
CBX3-205ENST00000462165 IWS1Q96ST2 819 aa12.72□□□□□ -0.37
CBX3-205ENST00000462165 HDAC6Q9UBN7 1215 aa12.72□□□□□ -0.37
CBX3-205ENST00000462165 MTUS1Q9ULD2 1270 aa12.72□□□□□ -0.37
CBX3-205ENST00000462165 ABCB11O95342 1321 aa12.71□□□□□ -0.37
CBX3-205ENST00000462165 HAS3O00219 553 aa12.71□□□□□ -0.37
CBX3-205ENST00000462165 F2P00734 622 aa12.71□□□□□ -0.37
CBX3-205ENST00000462165 HSPD1P10809 573 aaKnown RBP12.71□□□□□ -0.37
CBX3-205ENST00000462165 PSEN2P49810 448 aa12.71□□□□□ -0.37
CBX3-205ENST00000462165 PTK7Q13308 1070 aa12.71□□□□□ -0.37
CBX3-205ENST00000462165 IKBKEQ14164 716 aa12.71□□□□□ -0.37
CBX3-205ENST00000462165 STXBP2Q15833 593 aa12.71□□□□□ -0.37
CBX3-205ENST00000462165 TRIM71Q2Q1W2 868 aaKnown RBP12.71□□□□□ -0.37
CBX3-205ENST00000462165 MCMDC2Q4G0Z9 681 aa12.71□□□□□ -0.37
CBX3-205ENST00000462165 CHST3Q7LGC8 479 aa12.71□□□□□ -0.37
CBX3-205ENST00000462165 TICAM2Q86XR7 235 aa12.71□□□□□ -0.37
CBX3-205ENST00000462165 FAM178BQ8IXR5 827 aa12.71□□□□□ -0.37
CBX3-205ENST00000462165 C7orf31Q8N865 590 aa12.71□□□□□ -0.37
CBX3-205ENST00000462165 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.71□□□□□ -0.37
CBX3-205ENST00000462165 SYTL5Q8TDW5 730 aaPredicted RBP12.71□□□□□ -0.37
CBX3-205ENST00000462165 NSUN6Q8TEA1 469 aaKnown RBP12.71□□□□□ -0.37
CBX3-205ENST00000462165 EMID1Q96A84 441 aaPredicted RBP12.71□□□□□ -0.37
CBX3-205ENST00000462165 KATNAL1Q9BW62 490 aa12.71□□□□□ -0.37
CBX3-205ENST00000462165 COL20A1Q9P218 1284 aa12.71□□□□□ -0.37
CBX3-205ENST00000462165 DDX41Q9UJV9 622 aaKnown RBP12.71□□□□□ -0.37
CBX3-205ENST00000462165 PCDHB15Q9Y5E8 787 aa12.71□□□□□ -0.37
CBX3-205ENST00000462165 NLRC5Q86WI3 1866 aa12.71□□□□□ -0.37
CBX3-205ENST00000462165 TRIOO75962 3097 aa12.71□□□□□ -0.38
CBX3-205ENST00000462165 LAMA4Q16363 1823 aa12.7□□□□□ -0.38
CBX3-205ENST00000462165 A0A0D9SFI3 127 aa12.7□□□□□ -0.38
CBX3-205ENST00000462165 PRR33A8MZF0 331 aa12.7□□□□□ -0.38
CBX3-205ENST00000462165 GOLGA8HP0CJ92 632 aa12.7□□□□□ -0.38
CBX3-205ENST00000462165 HAND2P61296 217 aa12.7□□□□□ -0.38
CBX3-205ENST00000462165 CDC37Q16543 378 aaPredicted RBP12.7□□□□□ -0.38
CBX3-205ENST00000462165 MFSD6Q6ZSS7 791 aa12.7□□□□□ -0.38
CBX3-205ENST00000462165 MCF2L2Q86YR7 1114 aa12.7□□□□□ -0.38
CBX3-205ENST00000462165 GJD3Q8N144 294 aa12.7□□□□□ -0.38
CBX3-205ENST00000462165 FAM227BQ96M60 508 aa12.7□□□□□ -0.38
CBX3-205ENST00000462165 RMDN3Q96TC7 470 aa12.7□□□□□ -0.38
CBX3-205ENST00000462165 UBA5Q9GZZ9 404 aa12.7□□□□□ -0.38
CBX3-205ENST00000462165 CPVLQ9H3G5 476 aa12.7□□□□□ -0.38
CBX3-205ENST00000462165 INSL6Q9Y581 213 aa12.7□□□□□ -0.38
CBX3-205ENST00000462165 MUC6Q6W4X9 2439 aa12.7□□□□□ -0.38
CBX3-205ENST00000462165 LGR5O75473 907 aa12.69□□□□□ -0.38
CBX3-205ENST00000462165 EIF3JO75822 258 aaKnown RBP12.69□□□□□ -0.38
CBX3-205ENST00000462165 HOXD8P13378 290 aaPredicted RBP12.69□□□□□ -0.38
CBX3-205ENST00000462165 IL9P15248 144 aa12.69□□□□□ -0.38
CBX3-205ENST00000462165 HTRA4P83105 476 aaPredicted RBP12.69□□□□□ -0.38
CBX3-205ENST00000462165 LAMC2Q13753 1193 aa12.69□□□□□ -0.38
CBX3-205ENST00000462165 MBTPS1Q14703 1052 aa12.69□□□□□ -0.38
CBX3-205ENST00000462165 MFSD10Q14728 455 aa12.69□□□□□ -0.38
CBX3-205ENST00000462165 KIAA0753Q2KHM9 967 aa12.69□□□□□ -0.38
CBX3-205ENST00000462165 ZNF618Q5T7W0 954 aa12.69□□□□□ -0.38
CBX3-205ENST00000462165 DIEXFQ68CQ4 756 aaKnown RBP12.69□□□□□ -0.38
CBX3-205ENST00000462165 ZNF589Q86UQ0 364 aaPredicted RBP12.69□□□□□ -0.38
CBX3-205ENST00000462165 DGKHQ86XP1 1220 aa12.69□□□□□ -0.38
CBX3-205ENST00000462165 PPTC7Q8NI37 304 aa12.69□□□□□ -0.38
CBX3-205ENST00000462165 WNT8BQ93098 351 aa12.69□□□□□ -0.38
CBX3-205ENST00000462165 CRBNQ96SW2 442 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms