RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 SUPT16HQ9Y5B9 1047 aaKnown RBP20.78■□□□□ 0.92
SSB-206ENST00000461708 PCDHA1Q9Y5I3 950 aa20.78■□□□□ 0.92
SSB-206ENST00000461708 SCN5AQ14524 2016 aa20.78■□□□□ 0.92
SSB-206ENST00000461708 CFBP00751 764 aa20.77■□□□□ 0.92
SSB-206ENST00000461708 CYP21A2P08686 494 aa20.77■□□□□ 0.92
SSB-206ENST00000461708 IQCF3P0C7M6 154 aa20.77■□□□□ 0.92
SSB-206ENST00000461708 ATP2A2P16615 1042 aaKnown RBP20.77■□□□□ 0.92
SSB-206ENST00000461708 EIF2AK2P19525 551 aaKnown RBP20.77■□□□□ 0.92
SSB-206ENST00000461708 LAMC2Q13753 1193 aa20.77■□□□□ 0.92
SSB-206ENST00000461708 GRM4Q14833 912 aa20.77■□□□□ 0.92
SSB-206ENST00000461708 DGKDQ16760 1214 aa20.77■□□□□ 0.92
SSB-206ENST00000461708 KCNV1Q6PIU1 500 aa20.77■□□□□ 0.92
SSB-206ENST00000461708 SYMPKQ92797 1274 aaKnown RBP20.77■□□□□ 0.92
SSB-206ENST00000461708 PRDM12Q9H4Q4 367 aa20.77■□□□□ 0.92
SSB-206ENST00000461708 RIOX1Q9H6W3 641 aa20.77■□□□□ 0.92
SSB-206ENST00000461708 NOD1Q9Y239 953 aa20.77■□□□□ 0.92
SSB-206ENST00000461708 BAZ2BQ9UIF8 2168 aaKnown RBP20.77■□□□□ 0.92
SSB-206ENST00000461708 TRIP12Q14669 1992 aaPredicted RBP20.76■□□□□ 0.91
SSB-206ENST00000461708 PPP1R11O60927 126 aaPredicted RBP20.76■□□□□ 0.91
SSB-206ENST00000461708 SART3Q15020 963 aaKnown RBP20.76■□□□□ 0.91
SSB-206ENST00000461708 CCDC155Q8N6L0 562 aa20.76■□□□□ 0.91
SSB-206ENST00000461708 USP38Q8NB14 1042 aa20.76■□□□□ 0.91
SSB-206ENST00000461708 CAGE1Q8TC20 777 aa20.76■□□□□ 0.91
SSB-206ENST00000461708 PHOSPHO2Q8TCD6 241 aa20.76■□□□□ 0.91
SSB-206ENST00000461708 KAT2BQ92831 832 aa20.76■□□□□ 0.91
SSB-206ENST00000461708 NKX2-4Q9H2Z4 354 aa20.76■□□□□ 0.91
SSB-206ENST00000461708 SPTBN5Q9NRC6 3674 aaKnown RBP20.76■□□□□ 0.91
SSB-206ENST00000461708 ERICH2A1L162 156 aa20.75■□□□□ 0.91
SSB-206ENST00000461708 ZBBXA8MT70 800 aa20.75■□□□□ 0.91
SSB-206ENST00000461708 IFIT3O14879 490 aaKnown RBP20.75■□□□□ 0.91
SSB-206ENST00000461708 PARNO95453 639 aaKnown RBP20.75■□□□□ 0.91
SSB-206ENST00000461708 HOXD8P13378 290 aaPredicted RBP20.75■□□□□ 0.91
SSB-206ENST00000461708 PTH1RQ03431 593 aa20.75■□□□□ 0.91
SSB-206ENST00000461708 RBL2Q08999 1139 aa20.75■□□□□ 0.91
SSB-206ENST00000461708 PTGISQ16647 500 aa20.75■□□□□ 0.91
SSB-206ENST00000461708 VSIG10LQ86VR7 867 aa20.75■□□□□ 0.91
SSB-206ENST00000461708 PPTC7Q8NI37 304 aa20.75■□□□□ 0.91
SSB-206ENST00000461708 AFAP1L1Q8TED9 768 aa20.75■□□□□ 0.91
SSB-206ENST00000461708 PDCD2LQ9BRP1 358 aa20.75■□□□□ 0.91
SSB-206ENST00000461708 MRVI1Q9Y6F6 885 aa20.75■□□□□ 0.91
SSB-206ENST00000461708 BDP1A6H8Y1 2624 aa20.75■□□□□ 0.91
SSB-206ENST00000461708 TET1Q8NFU7 2136 aa20.75■□□□□ 0.91
SSB-206ENST00000461708 SGSM2O43147 1006 aa20.74■□□□□ 0.91
SSB-206ENST00000461708 TGFB3P10600 412 aa20.74■□□□□ 0.91
SSB-206ENST00000461708 TROAPQ12815 778 aa20.74■□□□□ 0.91
SSB-206ENST00000461708 DEFB128Q7Z7B8 93 aa20.74■□□□□ 0.91
SSB-206ENST00000461708 RALYLQ86SE5 291 aaKnown RBP20.74■□□□□ 0.91
SSB-206ENST00000461708 NCOA7Q8NI08 942 aa20.74■□□□□ 0.91
SSB-206ENST00000461708 CTAGE1Q96RT6 745 aa20.74■□□□□ 0.91
SSB-206ENST00000461708 SLC9A7Q96T83 725 aa20.74■□□□□ 0.91
SSB-206ENST00000461708 KATNAL1Q9BW62 490 aa20.74■□□□□ 0.91
SSB-206ENST00000461708 MYH7BA7E2Y1 1941 aa20.74■□□□□ 0.91
SSB-206ENST00000461708 PNMA6FA0A0J9YX94 578 aa20.73■□□□□ 0.91
SSB-206ENST00000461708 E7EWF7 191 aa20.73■□□□□ 0.91
SSB-206ENST00000461708 PPFIA4O75335 1185 aa20.73■□□□□ 0.91
SSB-206ENST00000461708 BAIAP3O94812 1187 aa20.73■□□□□ 0.91
SSB-206ENST00000461708 F2P00734 622 aa20.73■□□□□ 0.91
SSB-206ENST00000461708 RABGGTBP53611 331 aa20.73■□□□□ 0.91
SSB-206ENST00000461708 ADGRE1Q14246 886 aa20.73■□□□□ 0.91
SSB-206ENST00000461708 WTAPQ15007 396 aa20.73■□□□□ 0.91
SSB-206ENST00000461708 SLC35G1Q2M3R5 365 aa20.73■□□□□ 0.91
SSB-206ENST00000461708 CHST3Q7LGC8 479 aa20.73■□□□□ 0.91
SSB-206ENST00000461708 MAP4K1Q92918 833 aa20.73■□□□□ 0.91
SSB-206ENST00000461708 GTF2IRD1Q9UHL9 959 aa20.73■□□□□ 0.91
SSB-206ENST00000461708 HAS3O00219 553 aa20.72■□□□□ 0.91
SSB-206ENST00000461708 RGS20O76081 388 aa20.72■□□□□ 0.91
SSB-206ENST00000461708 PGM5Q15124 567 aa20.72■□□□□ 0.91
SSB-206ENST00000461708 TMEM67Q5HYA8 995 aa20.72■□□□□ 0.91
SSB-206ENST00000461708 TJAP1Q5JTD0 557 aa20.72■□□□□ 0.91
SSB-206ENST00000461708 MYSM1Q5VVJ2 828 aa20.72■□□□□ 0.91
SSB-206ENST00000461708 PPP2R2DQ66LE6 453 aa20.72■□□□□ 0.91
SSB-206ENST00000461708 GDF6Q6KF10 455 aaPredicted RBP20.72■□□□□ 0.91
SSB-206ENST00000461708 DHX37Q8IY37 1157 aaKnown RBP20.72■□□□□ 0.91
SSB-206ENST00000461708 PIGSQ96S52 555 aa20.72■□□□□ 0.91
SSB-206ENST00000461708 MAP3K14Q99558 947 aa20.72■□□□□ 0.91
SSB-206ENST00000461708 MTA3Q9BTC8 594 aa20.72■□□□□ 0.91
SSB-206ENST00000461708 GCOM1H8Y6P7 765 aaPredicted RBP20.71■□□□□ 0.91
SSB-206ENST00000461708 CYTH3O43739 400 aa20.71■□□□□ 0.91
SSB-206ENST00000461708 POLR2MP0CAP2 368 aa20.71■□□□□ 0.91
SSB-206ENST00000461708 SELPP16109 830 aa20.71■□□□□ 0.91
SSB-206ENST00000461708 PSEN2P49810 448 aa20.71■□□□□ 0.91
SSB-206ENST00000461708 CELF3Q5SZQ8 465 aaKnown RBP20.71■□□□□ 0.91
SSB-206ENST00000461708 CATIPQ7Z7H3 387 aa20.71■□□□□ 0.91
SSB-206ENST00000461708 C7orf31Q8N865 590 aa20.71■□□□□ 0.91
SSB-206ENST00000461708 PPP1R13LQ8WUF5 828 aa20.71■□□□□ 0.91
SSB-206ENST00000461708 ATXN2LQ8WWM7 1075 aaKnown RBP20.71■□□□□ 0.91
SSB-206ENST00000461708 FTOQ9C0B1 505 aaKnown RBP eCLIP20.71■□□□□ 0.91
SSB-206ENST00000461708 POU3F3P20264 500 aaPredicted RBP20.7■□□□□ 0.9
SSB-206ENST00000461708 HOXA13P31271 388 aaPredicted RBP20.7■□□□□ 0.9
SSB-206ENST00000461708 CHMP4BP1P59074 171 aa20.7■□□□□ 0.9
SSB-206ENST00000461708 HOMER1Q86YM7 354 aa20.7■□□□□ 0.9
SSB-206ENST00000461708 IGDCC4Q8TDY8 1250 aa20.7■□□□□ 0.9
SSB-206ENST00000461708 SENP2Q9HC62 589 aa20.7■□□□□ 0.9
SSB-206ENST00000461708 HDAC6Q9UBN7 1215 aa20.7■□□□□ 0.9
SSB-206ENST00000461708 TAF6LQ9Y6J9 622 aa20.7■□□□□ 0.9
SSB-206ENST00000461708 STAM2O75886 525 aa20.69■□□□□ 0.9
SSB-206ENST00000461708 CXCL10P02778 98 aa20.69■□□□□ 0.9
SSB-206ENST00000461708 MYCLP12524 364 aaPredicted RBP20.69■□□□□ 0.9
SSB-206ENST00000461708 MYOGP15173 224 aa20.69■□□□□ 0.9
SSB-206ENST00000461708 SMARCA1P28370 1054 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms