RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 CYP2C18P33260 490 aa20.16■□□□□ 0.82
MRPL28-207ENST00000461550 CHMP4BP1P59074 171 aa20.16■□□□□ 0.82
MRPL28-207ENST00000461550 ARHGAP1Q07960 439 aa20.16■□□□□ 0.82
MRPL28-207ENST00000461550 BRDTQ58F21 947 aaPredicted RBP20.16■□□□□ 0.82
MRPL28-207ENST00000461550 MTG1Q9BT17 334 aaPredicted RBP20.16■□□□□ 0.82
MRPL28-207ENST00000461550 MAP3K20Q9NYL2 800 aaKnown RBP20.16■□□□□ 0.82
MRPL28-207ENST00000461550 MRVI1Q9Y6F6 885 aa20.16■□□□□ 0.82
MRPL28-207ENST00000461550 RGS20O76081 388 aa20.15■□□□□ 0.82
MRPL28-207ENST00000461550 GNAQP50148 359 aa20.15■□□□□ 0.82
MRPL28-207ENST00000461550 EXOSC10Q01780 885 aaKnown RBP20.15■□□□□ 0.82
MRPL28-207ENST00000461550 FAM47CQ5HY64 1035 aa20.15■□□□□ 0.82
MRPL28-207ENST00000461550 APOA5Q6Q788 366 aa20.15■□□□□ 0.82
MRPL28-207ENST00000461550 DHX32Q7L7V1 743 aaKnown RBP20.15■□□□□ 0.82
MRPL28-207ENST00000461550 SGMS1Q86VZ5 419 aa20.15■□□□□ 0.82
MRPL28-207ENST00000461550 DEFB123Q8N688 67 aa20.15■□□□□ 0.82
MRPL28-207ENST00000461550 FANCBQ8NB91 859 aa20.15■□□□□ 0.82
MRPL28-207ENST00000461550 LZTS2Q9BRK4 669 aa20.15■□□□□ 0.82
MRPL28-207ENST00000461550 ALDH8A1Q9H2A2 487 aaPredicted RBP20.15■□□□□ 0.82
MRPL28-207ENST00000461550 TRMT13Q9NUP7 481 aaKnown RBP20.15■□□□□ 0.82
MRPL28-207ENST00000461550 DDX41Q9UJV9 622 aaKnown RBP20.15■□□□□ 0.82
MRPL28-207ENST00000461550 BRPF3Q9ULD4 1205 aa20.15■□□□□ 0.82
MRPL28-207ENST00000461550 MMP3P08254 477 aa20.14■□□□□ 0.81
MRPL28-207ENST00000461550 CSF2RAP15509 400 aa20.14■□□□□ 0.81
MRPL28-207ENST00000461550 NBPF20Q3BBV1 942 aa20.14■□□□□ 0.81
MRPL28-207ENST00000461550 TSGA10IPQ3SY00 556 aa20.14■□□□□ 0.81
MRPL28-207ENST00000461550 MFSD5Q6N075 450 aa20.14■□□□□ 0.81
MRPL28-207ENST00000461550 USP17L6PQ6QN14 398 aa20.14■□□□□ 0.81
MRPL28-207ENST00000461550 TMTC3Q6ZXV5 915 aa20.14■□□□□ 0.81
MRPL28-207ENST00000461550 VSIG10LQ86VR7 867 aa20.14■□□□□ 0.81
MRPL28-207ENST00000461550 SAMD3Q8N6K7 520 aa20.14■□□□□ 0.81
MRPL28-207ENST00000461550 RNPC3Q96LT9 517 aaKnown RBP20.14■□□□□ 0.81
MRPL28-207ENST00000461550 HIPK3Q9H422 1215 aa20.14■□□□□ 0.81
MRPL28-207ENST00000461550 COL6A3P12111 3177 aa20.13■□□□□ 0.81
MRPL28-207ENST00000461550 SMARCA1P28370 1054 aa20.13■□□□□ 0.81
MRPL28-207ENST00000461550 CCND2P30279 289 aa20.13■□□□□ 0.81
MRPL28-207ENST00000461550 KRT32Q14532 448 aa20.13■□□□□ 0.81
MRPL28-207ENST00000461550 GPKOWQ92917 476 aaPredicted RBP eCLIP20.13■□□□□ 0.81
MRPL28-207ENST00000461550 DOCK5Q9H7D0 1870 aa20.13■□□□□ 0.81
MRPL28-207ENST00000461550 ACRP10323 421 aa20.12■□□□□ 0.81
MRPL28-207ENST00000461550 CYP2C9P11712 490 aa20.12■□□□□ 0.81
MRPL28-207ENST00000461550 SYNE3Q6ZMZ3 975 aa20.12■□□□□ 0.81
MRPL28-207ENST00000461550 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.12■□□□□ 0.811e-8■■■■■ 29.6
MRPL28-207ENST00000461550 NOC4LQ9BVI4 516 aaKnown RBP20.12■□□□□ 0.81
MRPL28-207ENST00000461550 KPNA6O60684 536 aa20.11■□□□□ 0.81
MRPL28-207ENST00000461550 CCL23P55773 120 aa20.11■□□□□ 0.81
MRPL28-207ENST00000461550 GPR153Q6NV75 609 aa20.11■□□□□ 0.81
MRPL28-207ENST00000461550 C16orf59Q7L2K0 433 aa20.11■□□□□ 0.81
MRPL28-207ENST00000461550 TMEM199Q8N511 208 aa20.11■□□□□ 0.81
MRPL28-207ENST00000461550 SMARCC2Q8TAQ2 1214 aa20.11■□□□□ 0.81
MRPL28-207ENST00000461550 JAKMIP1Q96N16 626 aaKnown RBP20.11■□□□□ 0.81
MRPL28-207ENST00000461550 NAP1L2Q9ULW6 460 aaPredicted RBP20.11■□□□□ 0.81
MRPL28-207ENST00000461550 SNX14Q9Y5W7 946 aa20.11■□□□□ 0.81
MRPL28-207ENST00000461550 KLF18A0A0U1RQI7 1052 aa20.11■□□□□ 0.81
MRPL28-207ENST00000461550 MEIS2O14770 477 aa20.11■□□□□ 0.81
MRPL28-207ENST00000461550 ZBTB43O43298 467 aa20.11■□□□□ 0.81
MRPL28-207ENST00000461550 HSPA4P34932 840 aa20.11■□□□□ 0.81
MRPL28-207ENST00000461550 MRPS9P82933 396 aaKnown RBP20.11■□□□□ 0.81
MRPL28-207ENST00000461550 SP2Q02086 613 aa20.11■□□□□ 0.81
MRPL28-207ENST00000461550 PPIGQ13427 754 aaKnown RBP eCLIP20.11■□□□□ 0.812e-6■■■□□ 15.7
MRPL28-207ENST00000461550 HEATR3Q7Z4Q2 680 aa20.11■□□□□ 0.81
MRPL28-207ENST00000461550 DHX37Q8IY37 1157 aaKnown RBP20.11■□□□□ 0.81
MRPL28-207ENST00000461550 SEZ6LQ9BYH1 1024 aa20.11■□□□□ 0.81
MRPL28-207ENST00000461550 WNT8AQ9H1J5 351 aa20.11■□□□□ 0.81
MRPL28-207ENST00000461550 FRMPD4Q14CM0 1322 aa20.1■□□□□ 0.81
MRPL28-207ENST00000461550 CNTNAP5Q8WYK1 1306 aa20.1■□□□□ 0.81
MRPL28-207ENST00000461550 ZNF286BP0CG31 522 aa20.1■□□□□ 0.81
MRPL28-207ENST00000461550 UBA1P22314 1058 aaKnown RBP20.1■□□□□ 0.81
MRPL28-207ENST00000461550 FGD1P98174 961 aa20.1■□□□□ 0.81
MRPL28-207ENST00000461550 RTN1Q16799 776 aa20.1■□□□□ 0.81
MRPL28-207ENST00000461550 KCNB2Q92953 911 aa20.1■□□□□ 0.81
MRPL28-207ENST00000461550 CUL5Q93034 780 aa20.1■□□□□ 0.81
MRPL28-207ENST00000461550 FAM161BQ96MY7 647 aa20.1■□□□□ 0.81
MRPL28-207ENST00000461550 BCAS3Q9H6U6 928 aa20.1■□□□□ 0.81
MRPL28-207ENST00000461550 RTEL1Q9NZ71 1219 aa20.1■□□□□ 0.81
MRPL28-207ENST00000461550 GOLGA8AA7E2F4 631 aa20.09■□□□□ 0.81
MRPL28-207ENST00000461550 GOLGA8BA8MQT2 603 aa20.09■□□□□ 0.81
MRPL28-207ENST00000461550 GGPS1O95749 300 aa20.09■□□□□ 0.81
MRPL28-207ENST00000461550 DGKDQ16760 1214 aa20.09■□□□□ 0.81
MRPL28-207ENST00000461550 UBE2SQ16763 222 aa20.09■□□□□ 0.81
MRPL28-207ENST00000461550 TMEM240Q5SV17 173 aa20.09■□□□□ 0.81
MRPL28-207ENST00000461550 NFRKBQ6P4R8 1299 aa20.09■□□□□ 0.81
MRPL28-207ENST00000461550 KAT2BQ92831 832 aa20.09■□□□□ 0.81
MRPL28-207ENST00000461550 EMID1Q96A84 441 aaPredicted RBP20.09■□□□□ 0.81
MRPL28-207ENST00000461550 SCLYQ96I15 445 aa20.09■□□□□ 0.81
MRPL28-207ENST00000461550 PSTPIP2Q9H939 334 aa20.09■□□□□ 0.81
MRPL28-207ENST00000461550 SCN5AQ14524 2016 aa20.09■□□□□ 0.81
MRPL28-207ENST00000461550 REC8O95072 547 aa20.08■□□□□ 0.81
MRPL28-207ENST00000461550 HMGB1P09429 215 aaKnown RBP20.08■□□□□ 0.81
MRPL28-207ENST00000461550 CASTP20810 708 aaKnown RBP20.08■□□□□ 0.81
MRPL28-207ENST00000461550 APOBRQ0VD83 1088 aa20.08■□□□□ 0.81
MRPL28-207ENST00000461550 LAMC2Q13753 1193 aa20.08■□□□□ 0.81
MRPL28-207ENST00000461550 CELF3Q5SZQ8 465 aaKnown RBP20.08■□□□□ 0.81
MRPL28-207ENST00000461550 MYSM1Q5VVJ2 828 aa20.08■□□□□ 0.81
MRPL28-207ENST00000461550 ZNF365Q70YC5 407 aa20.08■□□□□ 0.81
MRPL28-207ENST00000461550 PPTC7Q8NI37 304 aa20.08■□□□□ 0.81
MRPL28-207ENST00000461550 SPATA33Q96N06 139 aa20.08■□□□□ 0.81
MRPL28-207ENST00000461550 RBM28Q9NW13 759 aaKnown RBP20.08■□□□□ 0.81
MRPL28-207ENST00000461550 MTMR10Q9NXD2 777 aa20.08■□□□□ 0.81
MRPL28-207ENST00000461550 PIK3CDO00329 1044 aa20.07■□□□□ 0.8
MRPL28-207ENST00000461550 SUPT20HL2P0C7V6 817 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms