RNA–Protein interactions for RNA: ENST00000461469.5

LMBR1-214, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-214ENST00000461469 SMARCA1P28370 1054 aa27.27■■□□□ 1.96
LMBR1-214ENST00000461469 RNF20Q5VTR2 975 aa27.27■■□□□ 1.96
LMBR1-214ENST00000461469 VSIG10LQ86VR7 867 aa27.27■■□□□ 1.96
LMBR1-214ENST00000461469 SLC12A7Q9Y666 1083 aa27.27■■□□□ 1.96
LMBR1-214ENST00000461469 DOCK5Q9H7D0 1870 aa27.27■■□□□ 1.96
LMBR1-214ENST00000461469 MMP3P08254 477 aa27.26■■□□□ 1.95
LMBR1-214ENST00000461469 NBPF20Q3BBV1 942 aa27.26■■□□□ 1.95
LMBR1-214ENST00000461469 MICU3Q86XE3 530 aa27.26■■□□□ 1.95
LMBR1-214ENST00000461469 CCDC82Q8N4S0 544 aa27.26■■□□□ 1.95
LMBR1-214ENST00000461469 DEFB123Q8N688 67 aa27.26■■□□□ 1.95
LMBR1-214ENST00000461469 SAMD3Q8N6K7 520 aa27.26■■□□□ 1.95
LMBR1-214ENST00000461469 RRP36Q96EU6 259 aaKnown RBP27.26■■□□□ 1.95
LMBR1-214ENST00000461469 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.26■■□□□ 1.957e-10■■■■□ 19.6
LMBR1-214ENST00000461469 FRMPD4Q14CM0 1322 aa27.25■■□□□ 1.95
LMBR1-214ENST00000461469 GH1P01241 217 aa27.25■■□□□ 1.95
LMBR1-214ENST00000461469 APOA5Q6Q788 366 aa27.25■■□□□ 1.95
LMBR1-214ENST00000461469 USP17L6PQ6QN14 398 aa27.25■■□□□ 1.95
LMBR1-214ENST00000461469 TMTC3Q6ZXV5 915 aa27.25■■□□□ 1.95
LMBR1-214ENST00000461469 FANCBQ8NB91 859 aa27.25■■□□□ 1.95
LMBR1-214ENST00000461469 KCNB2Q92953 911 aa27.25■■□□□ 1.95
LMBR1-214ENST00000461469 NOC4LQ9BVI4 516 aaKnown RBP27.25■■□□□ 1.95
LMBR1-214ENST00000461469 WNT8AQ9H1J5 351 aa27.25■■□□□ 1.95
LMBR1-214ENST00000461469 SCN5AQ14524 2016 aa27.24■■□□□ 1.95
LMBR1-214ENST00000461469 MEIS2O14770 477 aa27.24■■□□□ 1.95
LMBR1-214ENST00000461469 SORBS3O60504 671 aa27.24■■□□□ 1.95
LMBR1-214ENST00000461469 ACRP10323 421 aa27.24■■□□□ 1.95
LMBR1-214ENST00000461469 CYP2C9P11712 490 aa27.24■■□□□ 1.95
LMBR1-214ENST00000461469 SP2Q02086 613 aa27.24■■□□□ 1.95
LMBR1-214ENST00000461469 DHX32Q7L7V1 743 aaKnown RBP27.24■■□□□ 1.95
LMBR1-214ENST00000461469 KAT2BQ92831 832 aa27.24■■□□□ 1.95
LMBR1-214ENST00000461469 VWCEQ96DN2 955 aa27.24■■□□□ 1.95
LMBR1-214ENST00000461469 RNPC3Q96LT9 517 aaKnown RBP27.24■■□□□ 1.95
LMBR1-214ENST00000461469 LZTS2Q9BRK4 669 aa27.24■■□□□ 1.95
LMBR1-214ENST00000461469 HIPK3Q9H422 1215 aa27.24■■□□□ 1.95
LMBR1-214ENST00000461469 BCAS3Q9H6U6 928 aa27.24■■□□□ 1.95
LMBR1-214ENST00000461469 MRVI1Q9Y6F6 885 aa27.24■■□□□ 1.95
LMBR1-214ENST00000461469 CALM1P0DP23 149 aa27.23■■□□□ 1.95
LMBR1-214ENST00000461469 CALM2P0DP24 149 aa27.23■■□□□ 1.95
LMBR1-214ENST00000461469 CALM3P0DP25 149 aa27.23■■□□□ 1.95
LMBR1-214ENST00000461469 GNAQP50148 359 aa27.23■■□□□ 1.95
LMBR1-214ENST00000461469 MRPS9P82933 396 aaKnown RBP27.23■■□□□ 1.95
LMBR1-214ENST00000461469 TRAF1Q13077 416 aa27.23■■□□□ 1.95
LMBR1-214ENST00000461469 TMEM240Q5SV17 173 aa27.23■■□□□ 1.95
LMBR1-214ENST00000461469 MTMR10Q9NXD2 777 aa27.23■■□□□ 1.95
LMBR1-214ENST00000461469 RBAK-RBAKDNI3L0D1 243 aa27.22■■□□□ 1.95
LMBR1-214ENST00000461469 CCL23P55773 120 aa27.22■■□□□ 1.95
LMBR1-214ENST00000461469 CNTNAP5Q8WYK1 1306 aa27.21■■□□□ 1.95
LMBR1-214ENST00000461469 COL6A3P12111 3177 aa27.21■■□□□ 1.95
LMBR1-214ENST00000461469 HSPA4P34932 840 aa27.21■■□□□ 1.95
LMBR1-214ENST00000461469 FUT2Q10981 343 aa27.21■■□□□ 1.95
LMBR1-214ENST00000461469 SEMA3FQ13275 785 aa27.21■■□□□ 1.95
LMBR1-214ENST00000461469 BRDTQ58F21 947 aaPredicted RBP27.21■■□□□ 1.95
LMBR1-214ENST00000461469 FAM109BQ6ICB4 259 aaPredicted RBP27.21■■□□□ 1.95
LMBR1-214ENST00000461469 EMID1Q96A84 441 aaPredicted RBP27.21■■□□□ 1.95
LMBR1-214ENST00000461469 SEZ6LQ9BYH1 1024 aa27.21■■□□□ 1.95
LMBR1-214ENST00000461469 FAM217BQ9NTX9 383 aaPredicted RBP27.21■■□□□ 1.95
LMBR1-214ENST00000461469 SEC63Q9UGP8 760 aaKnown RBP27.21■■□□□ 1.95
LMBR1-214ENST00000461469 SNX14Q9Y5W7 946 aa27.21■■□□□ 1.95
LMBR1-214ENST00000461469 KPNA6O60684 536 aa27.2■■□□□ 1.94
LMBR1-214ENST00000461469 CCND2P30279 289 aa27.2■■□□□ 1.94
LMBR1-214ENST00000461469 PPIGQ13427 754 aaKnown RBP eCLIP27.2■■□□□ 1.941e-7■■□□□ 13.7
LMBR1-214ENST00000461469 FAM47CQ5HY64 1035 aa27.2■■□□□ 1.94
LMBR1-214ENST00000461469 TMEM199Q8N511 208 aa27.2■■□□□ 1.94
LMBR1-214ENST00000461469 CTAGE1Q96RT6 745 aa27.2■■□□□ 1.94
LMBR1-214ENST00000461469 TRIP12Q14669 1992 aaPredicted RBP27.19■■□□□ 1.94
LMBR1-214ENST00000461469 UBA1P22314 1058 aaKnown RBP27.19■■□□□ 1.94
LMBR1-214ENST00000461469 CHMP4BP1P59074 171 aa27.19■■□□□ 1.94
LMBR1-214ENST00000461469 MYSM1Q5VVJ2 828 aa27.19■■□□□ 1.94
LMBR1-214ENST00000461469 NFRKBQ6P4R8 1299 aa27.19■■□□□ 1.94
LMBR1-214ENST00000461469 ZNF365Q70YC5 407 aa27.19■■□□□ 1.94
LMBR1-214ENST00000461469 SCLYQ96I15 445 aa27.19■■□□□ 1.94
LMBR1-214ENST00000461469 FAM161BQ96MY7 647 aa27.19■■□□□ 1.94
LMBR1-214ENST00000461469 PIK3CDO00329 1044 aa27.18■■□□□ 1.94
LMBR1-214ENST00000461469 GGPS1O95749 300 aa27.18■■□□□ 1.94
LMBR1-214ENST00000461469 ZNF286BP0CG31 522 aa27.18■■□□□ 1.94
LMBR1-214ENST00000461469 CDC27P30260 824 aa27.18■■□□□ 1.94
LMBR1-214ENST00000461469 HSDL1Q3SXM5 330 aa27.18■■□□□ 1.94
LMBR1-214ENST00000461469 CELF3Q5SZQ8 465 aaKnown RBP27.18■■□□□ 1.94
LMBR1-214ENST00000461469 RASIP1Q5U651 963 aa27.18■■□□□ 1.94
LMBR1-214ENST00000461469 TYW1BQ6NUM6 668 aa27.18■■□□□ 1.94
LMBR1-214ENST00000461469 DHX37Q8IY37 1157 aaKnown RBP27.18■■□□□ 1.94
LMBR1-214ENST00000461469 GUCD1Q96NT3 240 aa27.18■■□□□ 1.94
LMBR1-214ENST00000461469 IL23AQ9NPF7 189 aa27.18■■□□□ 1.94
LMBR1-214ENST00000461469 RTEL1Q9NZ71 1219 aa27.18■■□□□ 1.94
LMBR1-214ENST00000461469 TELO2Q9Y4R8 837 aa27.18■■□□□ 1.94
LMBR1-214ENST00000461469 TANC1Q9C0D5 1861 aa27.18■■□□□ 1.94
LMBR1-214ENST00000461469 KLF18A0A0U1RQI7 1052 aa27.17■■□□□ 1.94
LMBR1-214ENST00000461469 NEFLP07196 543 aa27.17■■□□□ 1.94
LMBR1-214ENST00000461469 SMAD3P84022 425 aaKnown RBP27.17■■□□□ 1.94
LMBR1-214ENST00000461469 LAMC2Q13753 1193 aa27.17■■□□□ 1.94
LMBR1-214ENST00000461469 KRT32Q14532 448 aa27.17■■□□□ 1.94
LMBR1-214ENST00000461469 UBE2SQ16763 222 aa27.17■■□□□ 1.94
LMBR1-214ENST00000461469 PPTC7Q8NI37 304 aa27.17■■□□□ 1.94
LMBR1-214ENST00000461469 SMARCC2Q8TAQ2 1214 aa27.17■■□□□ 1.94
LMBR1-214ENST00000461469 JAKMIP1Q96N16 626 aaKnown RBP27.17■■□□□ 1.94
LMBR1-214ENST00000461469 INPP4AQ96PE3 977 aaPredicted RBP27.17■■□□□ 1.94
LMBR1-214ENST00000461469 GBF1Q92538 1859 aa27.17■■□□□ 1.94
LMBR1-214ENST00000461469 ZBTB43O43298 467 aa27.16■■□□□ 1.94
LMBR1-214ENST00000461469 HOXD8P13378 290 aaPredicted RBP27.16■■□□□ 1.94
LMBR1-214ENST00000461469 WWC2Q6AWC2 1192 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms