RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 PDCD2LQ9BRP1 358 aa17.98■□□□□ 0.47
NUP50-213ENST00000461437 NOC4LQ9BVI4 516 aaKnown RBP17.98■□□□□ 0.47
NUP50-213ENST00000461437 TTYH1Q9H313 450 aaPredicted RBP17.98■□□□□ 0.47
NUP50-213ENST00000461437 PNMA6FA0A0J9YX94 578 aa17.97■□□□□ 0.47
NUP50-213ENST00000461437 A6NJR5 290 aa17.97■□□□□ 0.47
NUP50-213ENST00000461437 MMP3P08254 477 aa17.97■□□□□ 0.47
NUP50-213ENST00000461437 MCM5P33992 734 aa17.97■□□□□ 0.47
NUP50-213ENST00000461437 GHRHRQ02643 423 aa17.97■□□□□ 0.47
NUP50-213ENST00000461437 PPIGQ13427 754 aaKnown RBP eCLIP17.97■□□□□ 0.47
NUP50-213ENST00000461437 PGM5Q15124 567 aa17.97■□□□□ 0.47
NUP50-213ENST00000461437 TMEM199Q8N511 208 aa17.97■□□□□ 0.47
NUP50-213ENST00000461437 CTCFLQ8NI51 663 aaPredicted RBP17.97■□□□□ 0.47
NUP50-213ENST00000461437 IWS1Q96ST2 819 aa17.97■□□□□ 0.47
NUP50-213ENST00000461437 DDX41Q9UJV9 622 aaKnown RBP17.97■□□□□ 0.47
NUP50-213ENST00000461437 CCDC69A6NI79 296 aa17.96■□□□□ 0.47
NUP50-213ENST00000461437 GCOM1H8Y6P7 765 aaPredicted RBP17.96■□□□□ 0.47
NUP50-213ENST00000461437 DDAH1O94760 285 aa17.96■□□□□ 0.47
NUP50-213ENST00000461437 GH1P01241 217 aa17.96■□□□□ 0.47
NUP50-213ENST00000461437 POLR2MP0CAP2 368 aa17.96■□□□□ 0.47
NUP50-213ENST00000461437 CCDC82Q8N4S0 544 aa17.96■□□□□ 0.47
NUP50-213ENST00000461437 SRBD1Q8N5C6 995 aaKnown RBP17.96■□□□□ 0.47
NUP50-213ENST00000461437 BCAS3Q9H6U6 928 aa17.96■□□□□ 0.47
NUP50-213ENST00000461437 CXXC1Q9P0U4 656 aaPredicted RBP17.96■□□□□ 0.47
NUP50-213ENST00000461437 MRVI1Q9Y6F6 885 aa17.96■□□□□ 0.47
NUP50-213ENST00000461437 EIF3JO75822 258 aaKnown RBP17.95■□□□□ 0.46
NUP50-213ENST00000461437 PBX2P40425 430 aa17.95■□□□□ 0.46
NUP50-213ENST00000461437 SMAD3P84022 425 aaKnown RBP17.95■□□□□ 0.46
NUP50-213ENST00000461437 ADCK5Q3MIX3 580 aa17.95■□□□□ 0.46
NUP50-213ENST00000461437 BRDTQ58F21 947 aaPredicted RBP17.95■□□□□ 0.46
NUP50-213ENST00000461437 RASEFQ8IZ41 740 aa17.95■□□□□ 0.46
NUP50-213ENST00000461437 VWCEQ96DN2 955 aa17.95■□□□□ 0.46
NUP50-213ENST00000461437 IL23AQ9NPF7 189 aa17.95■□□□□ 0.46
NUP50-213ENST00000461437 CDC45O75419 566 aa17.94■□□□□ 0.46
NUP50-213ENST00000461437 ZNF286BP0CG31 522 aa17.94■□□□□ 0.46
NUP50-213ENST00000461437 SP2Q02086 613 aa17.94■□□□□ 0.46
NUP50-213ENST00000461437 USP17L6PQ6QN14 398 aa17.94■□□□□ 0.46
NUP50-213ENST00000461437 OTOP2Q7RTS6 562 aa17.94■□□□□ 0.46
NUP50-213ENST00000461437 MICU3Q86XE3 530 aa17.94■□□□□ 0.46
NUP50-213ENST00000461437 KAT2BQ92831 832 aa17.94■□□□□ 0.46
NUP50-213ENST00000461437 CCDC136Q96JN2 1154 aa17.94■□□□□ 0.46
NUP50-213ENST00000461437 TMEM87BQ96K49 555 aa17.94■□□□□ 0.46
NUP50-213ENST00000461437 MAF1Q9H063 256 aa17.94■□□□□ 0.46
NUP50-213ENST00000461437 SEMA6BQ9H3T3 888 aa17.94■□□□□ 0.46
NUP50-213ENST00000461437 STXBP5LQ9Y2K9 1186 aa17.94■□□□□ 0.46
NUP50-213ENST00000461437 PTPRSQ13332 1948 aa17.94■□□□□ 0.46
NUP50-213ENST00000461437 EYSQ5T1H1 3165 aa17.93■□□□□ 0.46
NUP50-213ENST00000461437 CPA1P15085 419 aa17.93■□□□□ 0.46
NUP50-213ENST00000461437 DEFB128Q7Z7B8 93 aa17.93■□□□□ 0.46
NUP50-213ENST00000461437 VSIG10LQ86VR7 867 aa17.93■□□□□ 0.46
NUP50-213ENST00000461437 MYLIPQ8WY64 445 aa17.93■□□□□ 0.46
NUP50-213ENST00000461437 RRP36Q96EU6 259 aaKnown RBP17.93■□□□□ 0.46
NUP50-213ENST00000461437 CDX2Q99626 313 aaPredicted RBP17.93■□□□□ 0.46
NUP50-213ENST00000461437 ALG1Q9BT22 464 aa17.93■□□□□ 0.46
NUP50-213ENST00000461437 SPZ1Q9BXG8 430 aa17.93■□□□□ 0.46
NUP50-213ENST00000461437 GGPS1O95749 300 aa17.92■□□□□ 0.46
NUP50-213ENST00000461437 UBA1P22314 1058 aaKnown RBP17.92■□□□□ 0.46
NUP50-213ENST00000461437 DNAJB2P25686 324 aa17.92■□□□□ 0.46
NUP50-213ENST00000461437 KIF5BP33176 963 aa17.92■□□□□ 0.46
NUP50-213ENST00000461437 GDF6Q6KF10 455 aaPredicted RBP17.92■□□□□ 0.46
NUP50-213ENST00000461437 PSRC1Q6PGN9 363 aaPredicted RBP17.92■□□□□ 0.46
NUP50-213ENST00000461437 DHX37Q8IY37 1157 aaKnown RBP17.92■□□□□ 0.46
NUP50-213ENST00000461437 RTEL1Q9NZ71 1219 aa17.92■□□□□ 0.46
NUP50-213ENST00000461437 TELO2Q9Y4R8 837 aa17.92■□□□□ 0.46
NUP50-213ENST00000461437 SLC12A7Q9Y666 1083 aa17.92■□□□□ 0.46
NUP50-213ENST00000461437 CUL9Q8IWT3 2517 aa17.91■□□□□ 0.46
NUP50-213ENST00000461437 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.91■□□□□ 0.46
NUP50-213ENST00000461437 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.91■□□□□ 0.46
NUP50-213ENST00000461437 FGBP02675 491 aa17.91■□□□□ 0.46
NUP50-213ENST00000461437 CCND2P30279 289 aa17.91■□□□□ 0.46
NUP50-213ENST00000461437 LIFRP42702 1097 aa17.91■□□□□ 0.46
NUP50-213ENST00000461437 MRPS9P82933 396 aaKnown RBP17.91■□□□□ 0.46
NUP50-213ENST00000461437 HSDL1Q3SXM5 330 aa17.91■□□□□ 0.46
NUP50-213ENST00000461437 RASIP1Q5U651 963 aa17.91■□□□□ 0.46
NUP50-213ENST00000461437 NFRKBQ6P4R8 1299 aa17.91■□□□□ 0.46
NUP50-213ENST00000461437 NEK1Q96PY6 1258 aa17.91■□□□□ 0.46
NUP50-213ENST00000461437 CTAGE1Q96RT6 745 aa17.91■□□□□ 0.46
NUP50-213ENST00000461437 MAP3K14Q99558 947 aa17.91■□□□□ 0.46
NUP50-213ENST00000461437 PBX4Q9BYU1 374 aa17.91■□□□□ 0.46
NUP50-213ENST00000461437 MAP3K20Q9NYL2 800 aaKnown RBP17.91■□□□□ 0.46
NUP50-213ENST00000461437 BRPF3Q9ULD4 1205 aa17.91■□□□□ 0.46
NUP50-213ENST00000461437 KPNA6O60684 536 aa17.9■□□□□ 0.46
NUP50-213ENST00000461437 CASTP20810 708 aaKnown RBP17.9■□□□□ 0.46
NUP50-213ENST00000461437 PSEN2P49810 448 aa17.9■□□□□ 0.46
NUP50-213ENST00000461437 ZNF200P98182 395 aaPredicted RBP17.9■□□□□ 0.46
NUP50-213ENST00000461437 SEMA3FQ13275 785 aa17.9■□□□□ 0.46
NUP50-213ENST00000461437 UBE2SQ16763 222 aa17.9■□□□□ 0.46
NUP50-213ENST00000461437 MYSM1Q5VVJ2 828 aa17.9■□□□□ 0.46
NUP50-213ENST00000461437 SMARCC2Q8TAQ2 1214 aa17.9■□□□□ 0.46
NUP50-213ENST00000461437 MTA3Q9BTC8 594 aa17.9■□□□□ 0.46
NUP50-213ENST00000461437 SEZ6LQ9BYH1 1024 aa17.9■□□□□ 0.46
NUP50-213ENST00000461437 HDAC6Q9UBN7 1215 aa17.9■□□□□ 0.46
NUP50-213ENST00000461437 SEC63Q9UGP8 760 aaKnown RBP17.9■□□□□ 0.46
NUP50-213ENST00000461437 NOD1Q9Y239 953 aa17.9■□□□□ 0.46
NUP50-213ENST00000461437 UNC80Q8N2C7 3258 aa17.9■□□□□ 0.46
NUP50-213ENST00000461437 ZBBXA8MT70 800 aa17.89■□□□□ 0.45
NUP50-213ENST00000461437 MEIS2O14770 477 aa17.89■□□□□ 0.45
NUP50-213ENST00000461437 SUPT20HL2P0C7V6 817 aa17.89■□□□□ 0.45
NUP50-213ENST00000461437 RABGGTBP53611 331 aa17.89■□□□□ 0.45
NUP50-213ENST00000461437 EXOSC10Q01780 885 aaKnown RBP17.89■□□□□ 0.45
NUP50-213ENST00000461437 LAMC2Q13753 1193 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms