RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 GAB4Q2WGN9 574 aa4.3□□□□□ -1.72
VCL-203ENST00000461383 BRDTQ58F21 947 aaPredicted RBP4.3□□□□□ -1.72
VCL-203ENST00000461383 RNF219Q5W0B1 726 aaPredicted RBP4.3□□□□□ -1.72
VCL-203ENST00000461383 HLA-DQA1Q5Y7H0 255 aa4.3□□□□□ -1.72
VCL-203ENST00000461383 ZPBP2Q6X784 338 aa4.3□□□□□ -1.72
VCL-203ENST00000461383 EP400NLQ6ZTU2 488 aa4.3□□□□□ -1.72
VCL-203ENST00000461383 ANKLE2Q86XL3 938 aa4.3□□□□□ -1.72
VCL-203ENST00000461383 FBXW5Q969U6 566 aa4.3□□□□□ -1.72
VCL-203ENST00000461383 FCRL2Q96LA5 508 aaPredicted RBP4.3□□□□□ -1.72
VCL-203ENST00000461383 MTFR1LQ9H019 292 aa4.3□□□□□ -1.72
VCL-203ENST00000461383 IFT22Q9H7X7 185 aa4.3□□□□□ -1.72
VCL-203ENST00000461383 PAK6Q9NQU5 681 aaPredicted RBP4.3□□□□□ -1.72
VCL-203ENST00000461383 SEMA3GQ9NS98 782 aa4.3□□□□□ -1.72
VCL-203ENST00000461383 CATSPERZQ9NTU4 200 aa4.3□□□□□ -1.72
VCL-203ENST00000461383 CLDND1Q9NY35 253 aa4.3□□□□□ -1.72
VCL-203ENST00000461383 ZC3H7BQ9UGR2 993 aaKnown RBP4.3□□□□□ -1.72
VCL-203ENST00000461383 TCEAL9Q9UHQ7 104 aa4.3□□□□□ -1.72
VCL-203ENST00000461383 CCDC66A2RUB6 948 aa4.29□□□□□ -1.72
VCL-203ENST00000461383 ARVCFO00192 962 aa4.29□□□□□ -1.72
VCL-203ENST00000461383 GLRX3O76003 335 aaKnown RBP4.29□□□□□ -1.72
VCL-203ENST00000461383 POU3F3P20264 500 aaPredicted RBP4.29□□□□□ -1.72
VCL-203ENST00000461383 JAG1P78504 1218 aa4.29□□□□□ -1.72
VCL-203ENST00000461383 TEKQ02763 1124 aa4.29□□□□□ -1.72
VCL-203ENST00000461383 ITKQ08881 620 aa4.29□□□□□ -1.72
VCL-203ENST00000461383 DUSP4Q13115 394 aa4.29□□□□□ -1.72
VCL-203ENST00000461383 FZD5Q13467 585 aa4.29□□□□□ -1.72
VCL-203ENST00000461383 STAT4Q14765 748 aa4.29□□□□□ -1.72
VCL-203ENST00000461383 INF2Q27J81 1249 aa4.29□□□□□ -1.72
VCL-203ENST00000461383 OGFOD2Q6N063 350 aa4.29□□□□□ -1.72
VCL-203ENST00000461383 C11orf74Q86VG3 221 aa4.29□□□□□ -1.72
VCL-203ENST00000461383 SPATS2Q86XZ4 545 aaKnown RBP4.29□□□□□ -1.72
VCL-203ENST00000461383 NXPE1Q8N323 547 aa4.29□□□□□ -1.72
VCL-203ENST00000461383 USP33Q8TEY7 942 aa4.29□□□□□ -1.72
VCL-203ENST00000461383 MTMR8Q96EF0 704 aa4.29□□□□□ -1.72
VCL-203ENST00000461383 ASIC4Q96FT7 647 aa4.29□□□□□ -1.72
VCL-203ENST00000461383 TMEM169Q96HH4 297 aa4.29□□□□□ -1.72
VCL-203ENST00000461383 KCNJ15Q99712 375 aa4.29□□□□□ -1.72
VCL-203ENST00000461383 IPPKQ9H8X2 491 aa4.29□□□□□ -1.72
VCL-203ENST00000461383 ERVK13-1Q9NX77 482 aa4.29□□□□□ -1.72
VCL-203ENST00000461383 SLC5A4Q9NY91 659 aa4.29□□□□□ -1.72
VCL-203ENST00000461383 APOBEC2Q9Y235 224 aaKnown RBP4.29□□□□□ -1.72
VCL-203ENST00000461383 A0A1W2PQJ5 194 aa4.28□□□□□ -1.72
VCL-203ENST00000461383 TMEM82A0PJX8 343 aa4.28□□□□□ -1.72
VCL-203ENST00000461383 FAM83GA6ND36 823 aa4.28□□□□□ -1.72
VCL-203ENST00000461383 ZNF891A8MT65 544 aaPredicted RBP4.28□□□□□ -1.72
VCL-203ENST00000461383 ZEB2O60315 1214 aa4.28□□□□□ -1.72
VCL-203ENST00000461383 KATNA1O75449 491 aa4.28□□□□□ -1.72
VCL-203ENST00000461383 ESR1P03372 595 aa4.28□□□□□ -1.72
VCL-203ENST00000461383 BCL6P41182 706 aa4.28□□□□□ -1.72
VCL-203ENST00000461383 OCRLQ01968 901 aa4.28□□□□□ -1.72
VCL-203ENST00000461383 PRKCQQ04759 706 aa4.28□□□□□ -1.72
VCL-203ENST00000461383 CRY1Q16526 586 aa4.28□□□□□ -1.72
VCL-203ENST00000461383 SKOR2Q2VWA4 1001 aaPredicted RBP4.28□□□□□ -1.72
VCL-203ENST00000461383 TMEM177Q53S58 311 aa4.28□□□□□ -1.72
VCL-203ENST00000461383 HSP90AB2PQ58FF8 381 aa4.28□□□□□ -1.72
VCL-203ENST00000461383 IQSEC1Q6DN90 963 aa4.28□□□□□ -1.72
VCL-203ENST00000461383 ABHD17CQ6PCB6 329 aa4.28□□□□□ -1.72
VCL-203ENST00000461383 CEP68Q76N32 757 aa4.28□□□□□ -1.72
VCL-203ENST00000461383 NECAB2Q7Z6G3 386 aa4.28□□□□□ -1.72
VCL-203ENST00000461383 KIF18BQ86Y91 864 aa4.28□□□□□ -1.72
VCL-203ENST00000461383 CISD2Q8N5K1 135 aaKnown RBP4.28□□□□□ -1.72
VCL-203ENST00000461383 C2orf69Q8N8R5 385 aa4.28□□□□□ -1.72
VCL-203ENST00000461383 PCDH19Q8TAB3 1148 aa4.28□□□□□ -1.72
VCL-203ENST00000461383 MISP3Q96FF7 219 aa4.28□□□□□ -1.72
VCL-203ENST00000461383 TRMT2BQ96GJ1 504 aaKnown RBP4.28□□□□□ -1.72
VCL-203ENST00000461383 CCDC136Q96JN2 1154 aa4.28□□□□□ -1.72
VCL-203ENST00000461383 GPR101Q96P66 508 aaPredicted RBP4.28□□□□□ -1.72
VCL-203ENST00000461383 SMAD5Q99717 465 aaKnown RBP4.28□□□□□ -1.72
VCL-203ENST00000461383 KRTAP4-7Q9BYR0 210 aa4.28□□□□□ -1.72
VCL-203ENST00000461383 CELF4Q9BZC1 486 aaKnown RBP4.28□□□□□ -1.72
VCL-203ENST00000461383 CARS2Q9HA77 564 aaKnown RBP4.28□□□□□ -1.72
VCL-203ENST00000461383 MARCH2Q9P0N8 246 aa4.28□□□□□ -1.72
VCL-203ENST00000461383 TNFRSF10DQ9UBN6 386 aa4.28□□□□□ -1.72
VCL-203ENST00000461383 VAV3Q9UKW4 847 aa4.28□□□□□ -1.72
VCL-203ENST00000461383 COA3Q9Y2R0 106 aaPredicted RBP4.28□□□□□ -1.72
VCL-203ENST00000461383 WASHC2CQ9Y4E1 1318 aa4.27□□□□□ -1.73
VCL-203ENST00000461383 PTPDC1A2A3K4 754 aa4.27□□□□□ -1.73
VCL-203ENST00000461383 C7orf72A4D263 438 aa4.27□□□□□ -1.73
VCL-203ENST00000461383 CBX4O00257 560 aa4.27□□□□□ -1.73
VCL-203ENST00000461383 ARNTLO00327 626 aa4.27□□□□□ -1.73
VCL-203ENST00000461383 NEMP1O14524 444 aa4.27□□□□□ -1.73
VCL-203ENST00000461383 GPR39O43194 453 aa4.27□□□□□ -1.73
VCL-203ENST00000461383 ALDH1L1O75891 902 aa4.27□□□□□ -1.73
VCL-203ENST00000461383 KRT37O76014 449 aa4.27□□□□□ -1.73
VCL-203ENST00000461383 FKBP9O95302 570 aa4.27□□□□□ -1.73
VCL-203ENST00000461383 PAPLNO95428 1278 aa4.27□□□□□ -1.73
VCL-203ENST00000461383 PARNO95453 639 aaKnown RBP4.27□□□□□ -1.73
VCL-203ENST00000461383 EYA4O95677 639 aa4.27□□□□□ -1.73
VCL-203ENST00000461383 GNAT1P11488 350 aa4.27□□□□□ -1.73
VCL-203ENST00000461383 KRT15P19012 456 aa4.27□□□□□ -1.73
VCL-203ENST00000461383 KPNA1P52294 538 aaPredicted RBP4.27□□□□□ -1.73
VCL-203ENST00000461383 SLC14A2Q15849 920 aa4.27□□□□□ -1.73
VCL-203ENST00000461383 ATP13A4Q4VNC1 1196 aa4.27□□□□□ -1.73
VCL-203ENST00000461383 ANGEL2Q5VTE6 544 aaKnown RBP4.27□□□□□ -1.73
VCL-203ENST00000461383 MBLAC2Q68D91 279 aa4.27□□□□□ -1.73
VCL-203ENST00000461383 FKBP9P1Q75LS8 142 aa4.27□□□□□ -1.73
VCL-203ENST00000461383 TP53INP2Q8IXH6 220 aa4.27□□□□□ -1.73
VCL-203ENST00000461383 STK11IPQ8N1F8 1099 aa4.27□□□□□ -1.73
VCL-203ENST00000461383 CHST14Q8NCH0 376 aa4.27□□□□□ -1.73
VCL-203ENST00000461383 FLCNQ8NFG4 579 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms