RNA–Protein interactions for RNA: ENST00000461173.5

DHFR2-203, Transcript of dihydrofolate reductase 2, humanhuman

TSL 1 (best)

Gene DHFR2, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-203ENST00000461173 SLC35F6Q8N357 371 aa10.99□□□□□ -0.65
DHFR2-203ENST00000461173 GMCL1P1Q8NEA9 526 aa10.99□□□□□ -0.65
DHFR2-203ENST00000461173 HAS1Q92839 578 aa10.99□□□□□ -0.65
DHFR2-203ENST00000461173 CHP1Q99653 195 aa10.99□□□□□ -0.65
DHFR2-203ENST00000461173 IRX2Q9BZI1 471 aaPredicted RBP10.99□□□□□ -0.65
DHFR2-203ENST00000461173 ARFGAP3Q9NP61 516 aa10.99□□□□□ -0.65
DHFR2-203ENST00000461173 KCNMB3Q9NPA1 279 aa10.99□□□□□ -0.65
DHFR2-203ENST00000461173 GPCPD1Q9NPB8 672 aa10.99□□□□□ -0.65
DHFR2-203ENST00000461173 BMP2KQ9NSY1 1161 aaPredicted RBP10.99□□□□□ -0.65
DHFR2-203ENST00000461173 SERPINA10Q9UK55 444 aa10.99□□□□□ -0.65
DHFR2-203ENST00000461173 PLAGL2Q9UPG8 496 aa10.99□□□□□ -0.65
DHFR2-203ENST00000461173 REXO2Q9Y3B8 237 aaKnown RBP10.99□□□□□ -0.65
DHFR2-203ENST00000461173 ATRNL1Q5VV63 1379 aa10.99□□□□□ -0.65
DHFR2-203ENST00000461173 MYH4Q9Y623 1939 aa10.99□□□□□ -0.65
DHFR2-203ENST00000461173 ANO9A1A5B4 782 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 TRIM37O94972 964 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 FOSP01100 380 aaPredicted RBP10.98□□□□□ -0.65
DHFR2-203ENST00000461173 MMP14P50281 582 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 MCM6Q14566 821 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 VWA3BQ502W6 1294 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 PAPD7Q5XG87 772 aaKnown RBP10.98□□□□□ -0.65
DHFR2-203ENST00000461173 TMEM179Q6ZVK1 233 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 CRYGNQ8WXF5 182 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 CEP63Q96MT8 703 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 PURBQ96QR8 312 aaKnown RBP10.98□□□□□ -0.65
DHFR2-203ENST00000461173 TSG101Q99816 390 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 SLF1Q9BQI6 1058 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 PARD6BQ9BYG5 372 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 NUCKS1Q9H1E3 243 aaKnown RBP10.98□□□□□ -0.65
DHFR2-203ENST00000461173 PCDHA12Q9UN75 941 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 SIK3Q9Y2K2 1263 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 PITPNM2Q9BZ72 1349 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 G3V3G9 751 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 LCA5LO95447 670 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 TNNI2P48788 182 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 MARSP56192 900 aaKnown RBP10.98□□□□□ -0.65
DHFR2-203ENST00000461173 TRAF1Q13077 416 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 CCDC96Q2M329 555 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 ZCWPW2Q504Y3 356 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 TEX35Q5T0J7 233 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 DCAF8Q5TAQ9 597 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 LRRC55Q6ZSA7 311 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 TRAPPC11Q7Z392 1133 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 COL23A1Q86Y22 540 aaPredicted RBP10.98□□□□□ -0.65
DHFR2-203ENST00000461173 ZC3H3Q8IXZ2 948 aaKnown RBP10.98□□□□□ -0.65
DHFR2-203ENST00000461173 TXLNBQ8N3L3 684 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 DDX12PQ92771 950 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 DNAJC19Q96DA6 116 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 GMCL1Q96IK5 515 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 GBP3Q9H0R5 595 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 NDST4Q9H3R1 872 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 DNAJC18Q9H819 358 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 MYO6Q9UM54 1294 aa10.98□□□□□ -0.65
DHFR2-203ENST00000461173 FRMD3A2A2Y4 597 aa10.97□□□□□ -0.65
DHFR2-203ENST00000461173 CTAGE15A4D2H0 777 aa10.97□□□□□ -0.65
DHFR2-203ENST00000461173 POTEMA6NI47 508 aa10.97□□□□□ -0.65
DHFR2-203ENST00000461173 USP17L10C9JJH3 530 aa10.97□□□□□ -0.65
DHFR2-203ENST00000461173 ENTPD3O75355 529 aa10.97□□□□□ -0.65
DHFR2-203ENST00000461173 CTAGE8P0CG41 777 aa10.97□□□□□ -0.65
DHFR2-203ENST00000461173 HSPA1LP34931 641 aa10.97□□□□□ -0.65
DHFR2-203ENST00000461173 FKBP3Q00688 224 aaKnown RBP10.97□□□□□ -0.65
DHFR2-203ENST00000461173 NFIAQ12857 509 aa10.97□□□□□ -0.65
DHFR2-203ENST00000461173 TERF2Q15554 542 aa10.97□□□□□ -0.65
DHFR2-203ENST00000461173 CERKLQ49MI3 558 aaPredicted RBP10.97□□□□□ -0.65
DHFR2-203ENST00000461173 DACT2Q5SW24 774 aa10.97□□□□□ -0.65
DHFR2-203ENST00000461173 CC2D2BQ6DHV5 1058 aa10.97□□□□□ -0.65
DHFR2-203ENST00000461173 TTBK2Q6IQ55 1244 aa10.97□□□□□ -0.65
DHFR2-203ENST00000461173 BTNL9Q6UXG8 535 aa10.97□□□□□ -0.65
DHFR2-203ENST00000461173 CTAGE6Q86UF2 777 aa10.97□□□□□ -0.65
DHFR2-203ENST00000461173 CTAGE4Q8IX94 777 aa10.97□□□□□ -0.65
DHFR2-203ENST00000461173 MYOCDQ8IZQ8 938 aa10.97□□□□□ -0.65
DHFR2-203ENST00000461173 SYN2Q92777 582 aaPredicted RBP10.97□□□□□ -0.65
DHFR2-203ENST00000461173 NHEJ1Q9H9Q4 299 aaPredicted RBP10.97□□□□□ -0.65
DHFR2-203ENST00000461173 SLC39A2Q9NP94 309 aa10.97□□□□□ -0.65
DHFR2-203ENST00000461173 COL11A2P13942 1736 aaPredicted RBP10.97□□□□□ -0.65
DHFR2-203ENST00000461173 SIPA1L1O43166 1804 aa10.97□□□□□ -0.65
DHFR2-203ENST00000461173 BRWD3Q6RI45 1802 aa10.97□□□□□ -0.65
DHFR2-203ENST00000461173 MYH7BA7E2Y1 1941 aa10.96□□□□□ -0.65
DHFR2-203ENST00000461173 A0A0U1RQJ8 604 aa10.96□□□□□ -0.65
DHFR2-203ENST00000461173 F8W031 263 aaPredicted RBP10.96□□□□□ -0.65
DHFR2-203ENST00000461173 PES1O00541 588 aaKnown RBP10.96□□□□□ -0.65
DHFR2-203ENST00000461173 ERLIN1O75477 346 aa10.96□□□□□ -0.65
DHFR2-203ENST00000461173 TBC1D8O95759 1140 aa10.96□□□□□ -0.65
DHFR2-203ENST00000461173 CIITAP33076 1130 aa10.96□□□□□ -0.65
DHFR2-203ENST00000461173 SLC1A4P43007 532 aa10.96□□□□□ -0.65
DHFR2-203ENST00000461173 PLA2G4AP47712 749 aa10.96□□□□□ -0.65
DHFR2-203ENST00000461173 VAV2P52735 878 aa10.96□□□□□ -0.65
DHFR2-203ENST00000461173 HERVK_113P62684 666 aa10.96□□□□□ -0.65
DHFR2-203ENST00000461173 QRICH1Q2TAL8 776 aa10.96□□□□□ -0.65
DHFR2-203ENST00000461173 Q4G0T1 1027 aa10.96□□□□□ -0.65
DHFR2-203ENST00000461173 HAUS3Q68CZ6 603 aa10.96□□□□□ -0.65
DHFR2-203ENST00000461173 SLFN13Q68D06 897 aa10.96□□□□□ -0.65
DHFR2-203ENST00000461173 CCDC65Q8IXS2 484 aa10.96□□□□□ -0.65
DHFR2-203ENST00000461173 ATRIPQ8WXE1 791 aa10.96□□□□□ -0.65
DHFR2-203ENST00000461173 AGPAT5Q9NUQ2 364 aa10.96□□□□□ -0.65
DHFR2-203ENST00000461173 FAM198AQ9UFP1 575 aa10.96□□□□□ -0.65
DHFR2-203ENST00000461173 SSU72P8A0A1W2PR75 194 aa10.95□□□□□ -0.66
DHFR2-203ENST00000461173 MAP2K7O14733 419 aa10.95□□□□□ -0.66
DHFR2-203ENST00000461173 EEF2P13639 858 aaKnown RBP10.95□□□□□ -0.66
DHFR2-203ENST00000461173 MCM3P25205 808 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms