RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 ADAMTS4O75173 837 aa18.61■□□□□ 0.57
SHANK1-205ENST00000461154 STAM2O75886 525 aa18.61■□□□□ 0.57
SHANK1-205ENST00000461154 CTDNEP1O95476 244 aa18.61■□□□□ 0.57
SHANK1-205ENST00000461154 MYCLP12524 364 aaPredicted RBP18.61■□□□□ 0.57
SHANK1-205ENST00000461154 ADCYAP1R1P41586 468 aa18.61■□□□□ 0.57
SHANK1-205ENST00000461154 NLRP5P59047 1200 aa18.61■□□□□ 0.57
SHANK1-205ENST00000461154 AP3B2Q13367 1082 aa18.61■□□□□ 0.57
SHANK1-205ENST00000461154 TAPT1Q6NXT6 567 aa18.61■□□□□ 0.57
SHANK1-205ENST00000461154 XRRA1Q6P2D8 792 aa18.61■□□□□ 0.57
SHANK1-205ENST00000461154 CCDC83Q8IWF9 413 aa18.61■□□□□ 0.57
SHANK1-205ENST00000461154 NSUN7Q8NE18 718 aaKnown RBP18.61■□□□□ 0.57
SHANK1-205ENST00000461154 LENG1Q96BZ8 264 aaPredicted RBP18.61■□□□□ 0.57
SHANK1-205ENST00000461154 VPS54Q9P1Q0 977 aa18.61■□□□□ 0.57
SHANK1-205ENST00000461154 PCDHA6Q9UN73 950 aa18.61■□□□□ 0.57
SHANK1-205ENST00000461154 PCDHA8Q9Y5H6 950 aa18.61■□□□□ 0.57
SHANK1-205ENST00000461154 SYNRGQ9UMZ2 1314 aa18.6■□□□□ 0.57
SHANK1-205ENST00000461154 RBM47A0AV96 593 aaKnown RBP18.6■□□□□ 0.57
SHANK1-205ENST00000461154 H0YGN5 161 aa18.6■□□□□ 0.57
SHANK1-205ENST00000461154 GJA9P57773 515 aa18.6■□□□□ 0.57
SHANK1-205ENST00000461154 GALNT17Q6IS24 598 aa18.6■□□□□ 0.57
SHANK1-205ENST00000461154 VSIG10LQ86VR7 867 aa18.6■□□□□ 0.57
SHANK1-205ENST00000461154 REXO1Q8N1G1 1221 aaKnown RBP18.6■□□□□ 0.57
SHANK1-205ENST00000461154 KLHDC9Q8NEP7 349 aa18.6■□□□□ 0.57
SHANK1-205ENST00000461154 UPF3AQ9H1J1 476 aaKnown RBP18.6■□□□□ 0.57
SHANK1-205ENST00000461154 PDGFCQ9NRA1 345 aa18.6■□□□□ 0.57
SHANK1-205ENST00000461154 PHF24Q9UPV7 400 aa18.6■□□□□ 0.57
SHANK1-205ENST00000461154 Q9Y3F1 56 aa18.6■□□□□ 0.57
SHANK1-205ENST00000461154 BRCA2P51587 3418 aa18.59■□□□□ 0.57
SHANK1-205ENST00000461154 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.59■□□□□ 0.57
SHANK1-205ENST00000461154 NKRFO15226 690 aaKnown RBP eCLIP18.59■□□□□ 0.57
SHANK1-205ENST00000461154 C6orf222P0C671 652 aaPredicted RBP18.59■□□□□ 0.57
SHANK1-205ENST00000461154 CST5P28325 142 aaPredicted RBP18.59■□□□□ 0.57
SHANK1-205ENST00000461154 CLK2P49760 499 aaKnown RBP18.59■□□□□ 0.57
SHANK1-205ENST00000461154 TTLL4Q14679 1199 aa18.59■□□□□ 0.57
SHANK1-205ENST00000461154 LRRC26Q2I0M4 334 aa18.59■□□□□ 0.57
SHANK1-205ENST00000461154 PCNX4Q63HM2 1172 aa18.59■□□□□ 0.57
SHANK1-205ENST00000461154 SEPT14Q6ZU15 432 aa18.59■□□□□ 0.57
SHANK1-205ENST00000461154 PCSK9Q8NBP7 692 aaKnown RBP18.59■□□□□ 0.57
SHANK1-205ENST00000461154 IL31RAQ8NI17 732 aa18.59■□□□□ 0.57
SHANK1-205ENST00000461154 ANO3Q9BYT9 981 aa18.59■□□□□ 0.57
SHANK1-205ENST00000461154 WDR11Q9BZH6 1224 aa18.59■□□□□ 0.57
SHANK1-205ENST00000461154 KIAA1217Q5T5P2 1943 aa18.59■□□□□ 0.57
SHANK1-205ENST00000461154 TNRC18O15417 2968 aaPredicted RBP18.58■□□□□ 0.57
SHANK1-205ENST00000461154 MOXD2PA6NHM9 499 aa18.58■□□□□ 0.56
SHANK1-205ENST00000461154 ADCY6O43306 1168 aa18.58■□□□□ 0.56
SHANK1-205ENST00000461154 SMPD1P17405 629 aa18.58■□□□□ 0.56
SHANK1-205ENST00000461154 ATN1P54259 1190 aaPredicted RBP18.58■□□□□ 0.56
SHANK1-205ENST00000461154 NKX3-2P78367 333 aa18.58■□□□□ 0.56
SHANK1-205ENST00000461154 HMGN5P82970 282 aaKnown RBP18.58■□□□□ 0.56
SHANK1-205ENST00000461154 ST3GAL1Q11201 340 aa18.58■□□□□ 0.56
SHANK1-205ENST00000461154 GNPTABQ3T906 1256 aa18.58■□□□□ 0.56
SHANK1-205ENST00000461154 DUSP28Q4G0W2 176 aa18.58■□□□□ 0.56
SHANK1-205ENST00000461154 KCNV1Q6PIU1 500 aa18.58■□□□□ 0.56
SHANK1-205ENST00000461154 SLC39A5Q6ZMH5 540 aa18.58■□□□□ 0.56
SHANK1-205ENST00000461154 C7orf61Q8IZ16 206 aa18.58■□□□□ 0.56
SHANK1-205ENST00000461154 FERMT2Q96AC1 680 aa18.58■□□□□ 0.56
SHANK1-205ENST00000461154 AIFM3Q96NN9 605 aa18.58■□□□□ 0.56
SHANK1-205ENST00000461154 ALG1Q9BT22 464 aa18.58■□□□□ 0.56
SHANK1-205ENST00000461154 AP5M1Q9H0R1 490 aa18.58■□□□□ 0.56
SHANK1-205ENST00000461154 PCDHA4Q9UN74 947 aa18.58■□□□□ 0.56
SHANK1-205ENST00000461154 GNEQ9Y223 722 aaKnown RBP18.58■□□□□ 0.56
SHANK1-205ENST00000461154 JAK2O60674 1132 aa18.57■□□□□ 0.56
SHANK1-205ENST00000461154 TXNP10599 105 aaKnown RBP18.57■□□□□ 0.56
SHANK1-205ENST00000461154 FDPSP14324 419 aaKnown RBP18.57■□□□□ 0.56
SHANK1-205ENST00000461154 ACLYP53396 1101 aa18.57■□□□□ 0.56
SHANK1-205ENST00000461154 KCNA10Q16322 511 aa18.57■□□□□ 0.56
SHANK1-205ENST00000461154 GNASQ5JWF2 1037 aa18.57■□□□□ 0.56
SHANK1-205ENST00000461154 JAKMIP3Q5VZ66 844 aa18.57■□□□□ 0.56
SHANK1-205ENST00000461154 CCSAPQ6IQ19 270 aaPredicted RBP18.57■□□□□ 0.56
SHANK1-205ENST00000461154 TLK2Q86UE8 772 aa18.57■□□□□ 0.56
SHANK1-205ENST00000461154 TMX3Q96JJ7 454 aa18.57■□□□□ 0.56
SHANK1-205ENST00000461154 MRVI1Q9Y6F6 885 aa18.57■□□□□ 0.56
SHANK1-205ENST00000461154 DYNC1LI2O43237 492 aaPredicted RBP18.56■□□□□ 0.56
SHANK1-205ENST00000461154 CD2BP2O95400 341 aaKnown RBP18.56■□□□□ 0.56
SHANK1-205ENST00000461154 MRPS9P82933 396 aaKnown RBP18.56■□□□□ 0.56
SHANK1-205ENST00000461154 TRIM29Q14134 588 aa18.56■□□□□ 0.56
SHANK1-205ENST00000461154 C1orf53Q5VUE5 145 aa18.56■□□□□ 0.56
SHANK1-205ENST00000461154 NLRX1Q86UT6 975 aa18.56■□□□□ 0.56
SHANK1-205ENST00000461154 DAGLBQ8NCG7 672 aa18.56■□□□□ 0.56
SHANK1-205ENST00000461154 TMEM260Q9NX78 707 aa18.56■□□□□ 0.56
SHANK1-205ENST00000461154 A0A1W2PQ45 241 aaPredicted RBP18.55■□□□□ 0.56
SHANK1-205ENST00000461154 A0A1W2PQY0 241 aa18.55■□□□□ 0.56
SHANK1-205ENST00000461154 ZEB2O60315 1214 aa18.55■□□□□ 0.56
SHANK1-205ENST00000461154 TGFB3P10600 412 aa18.55■□□□□ 0.56
SHANK1-205ENST00000461154 SREBF1P36956 1147 aa18.55■□□□□ 0.56
SHANK1-205ENST00000461154 RTP1P59025 263 aa18.55■□□□□ 0.56
SHANK1-205ENST00000461154 SNX17Q15036 470 aa18.55■□□□□ 0.56
SHANK1-205ENST00000461154 CCDC62Q6P9F0 684 aa18.55■□□□□ 0.56
SHANK1-205ENST00000461154 BLIDQ8IZY5 108 aa18.55■□□□□ 0.56
SHANK1-205ENST00000461154 FAM184AQ8NB25 1140 aa18.55■□□□□ 0.56
SHANK1-205ENST00000461154 CDHR1Q96JP9 859 aa18.55■□□□□ 0.56
SHANK1-205ENST00000461154 PGBD1Q96JS3 809 aa18.55■□□□□ 0.56
SHANK1-205ENST00000461154 GLT1D1Q96MS3 346 aa18.55■□□□□ 0.56
SHANK1-205ENST00000461154 INPP4AQ96PE3 977 aaPredicted RBP18.55■□□□□ 0.56
SHANK1-205ENST00000461154 PHF20Q9BVI0 1012 aa18.55■□□□□ 0.56
SHANK1-205ENST00000461154 BRMS1Q9HCU9 246 aa18.55■□□□□ 0.56
SHANK1-205ENST00000461154 KIF3AQ9Y496 699 aa18.55■□□□□ 0.56
SHANK1-205ENST00000461154 MYADML2A6NDP7 307 aa18.54■□□□□ 0.56
SHANK1-205ENST00000461154 FIBPO43427 364 aa18.54■□□□□ 0.56
SHANK1-205ENST00000461154 ASGR1P07306 291 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms