RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 SLFN12Q8IYM2 578 aa12.22□□□□□ -0.45
IFT88-204ENST00000461115 GPC2Q8N158 579 aa12.22□□□□□ -0.45
IFT88-204ENST00000461115 NLGN2Q8NFZ4 835 aa12.22□□□□□ -0.45
IFT88-204ENST00000461115 ETNPPLQ8TBG4 499 aa12.22□□□□□ -0.45
IFT88-204ENST00000461115 CACTINQ8WUQ7 758 aaKnown RBP12.22□□□□□ -0.45
IFT88-204ENST00000461115 HOOK2Q96ED9 719 aa12.22□□□□□ -0.45
IFT88-204ENST00000461115 CALML4Q96GE6 196 aa12.22□□□□□ -0.45
IFT88-204ENST00000461115 WDR18Q9BV38 432 aa12.22□□□□□ -0.45
IFT88-204ENST00000461115 TRIM9Q9C026 710 aa12.22□□□□□ -0.45
IFT88-204ENST00000461115 HACL1Q9UJ83 578 aa12.22□□□□□ -0.45
IFT88-204ENST00000461115 ABCB11O95342 1321 aa12.22□□□□□ -0.45
IFT88-204ENST00000461115 ZNF541Q9H0D2 1346 aa12.22□□□□□ -0.45
IFT88-204ENST00000461115 LOXHD1Q8IVV2 1947 aa12.21□□□□□ -0.45
IFT88-204ENST00000461115 PVALEFA0A1B0GWK0 134 aa12.21□□□□□ -0.45
IFT88-204ENST00000461115 TXKP42681 527 aa12.21□□□□□ -0.45
IFT88-204ENST00000461115 AMPD3Q01432 767 aa12.21□□□□□ -0.45
IFT88-204ENST00000461115 EHHADHQ08426 723 aa12.21□□□□□ -0.45
IFT88-204ENST00000461115 SPIRE1Q08AE8 756 aa12.21□□□□□ -0.45
IFT88-204ENST00000461115 KIF4BQ2VIQ3 1234 aa12.21□□□□□ -0.45
IFT88-204ENST00000461115 MIGA2Q7L4E1 593 aa12.21□□□□□ -0.45
IFT88-204ENST00000461115 APOBEC3FQ8IUX4 373 aaKnown RBP12.21□□□□□ -0.45
IFT88-204ENST00000461115 VSTM4Q8IW00 320 aa12.21□□□□□ -0.45
IFT88-204ENST00000461115 ADSSL1Q8N142 457 aa12.21□□□□□ -0.45
IFT88-204ENST00000461115 FAM20AQ96MK3 541 aa12.21□□□□□ -0.45
IFT88-204ENST00000461115 ZNF830Q96NB3 372 aaPredicted RBP12.21□□□□□ -0.45
IFT88-204ENST00000461115 INTS13Q9NVM9 706 aa12.21□□□□□ -0.45
IFT88-204ENST00000461115 GPRC5DQ9NZD1 345 aa12.21□□□□□ -0.45
IFT88-204ENST00000461115 PNMA2Q9UL42 364 aa12.21□□□□□ -0.45
IFT88-204ENST00000461115 PITPNM2Q9BZ72 1349 aa12.21□□□□□ -0.46
IFT88-204ENST00000461115 A0A1B0GTH6 734 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 FDX1P10109 184 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 LMNB1P20700 586 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 TERF1P54274 439 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 UBASH3AP57075 661 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 TBX2Q13207 712 aaPredicted RBP12.2□□□□□ -0.46
IFT88-204ENST00000461115 NR1I3Q14994 352 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 KRT79Q5XKE5 535 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 DCAF15Q66K64 600 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 SAMD7Q7Z3H4 446 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 DRC7Q8IY82 874 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 HS6ST3Q8IZP7 471 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 SPICE1Q8N0Z3 855 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 C12orf42Q96LP6 360 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 GLIS2Q9BZE0 524 aaPredicted RBP12.2□□□□□ -0.46
IFT88-204ENST00000461115 LRRC27Q9C0I9 530 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 MAF1Q9H063 256 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 BLZF1Q9H2G9 400 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 MAP3K20Q9NYL2 800 aaKnown RBP12.2□□□□□ -0.46
IFT88-204ENST00000461115 PYCARDQ9ULZ3 195 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 PCDHA12Q9UN75 941 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 MRPL11Q9Y3B7 192 aaKnown RBP12.2□□□□□ -0.46
IFT88-204ENST00000461115 ZNF536O15090 1300 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 SYNRGQ9UMZ2 1314 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 KDM3AQ9Y4C1 1321 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 PTPRFP10586 1907 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 IGLV3-22A0A075B6J6 115 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 H7C1D1 291 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 HOXB3P14651 431 aaPredicted RBP12.2□□□□□ -0.46
IFT88-204ENST00000461115 PBX1P40424 430 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 HSD17B4P51659 736 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 CCZ1BP86790 482 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 CCZ1P86791 482 aaPredicted RBP12.2□□□□□ -0.46
IFT88-204ENST00000461115 NOLC1Q14978 699 aaKnown RBP eCLIP12.2□□□□□ -0.46
IFT88-204ENST00000461115 KMT5BQ4FZB7 885 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.2□□□□□ -0.46
IFT88-204ENST00000461115 CCDC150Q8NCX0 1101 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 RAD54LQ92698 747 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 STAMQ92783 540 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 NAP1L5Q96NT1 182 aaPredicted RBP12.2□□□□□ -0.46
IFT88-204ENST00000461115 ZNF341Q9BYN7 854 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 NT5C3AQ9H0P0 336 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 TMX1Q9H3N1 280 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 SAMSN1Q9NSI8 373 aaKnown RBP12.2□□□□□ -0.46
IFT88-204ENST00000461115 LIMA1Q9UHB6 759 aaKnown RBP12.2□□□□□ -0.46
IFT88-204ENST00000461115 RABGAP1Q9Y3P9 1069 aa12.2□□□□□ -0.46
IFT88-204ENST00000461115 SPDYE3A6NKU9 549 aa12.19□□□□□ -0.46
IFT88-204ENST00000461115 ICAM1P05362 532 aa12.19□□□□□ -0.46
IFT88-204ENST00000461115 INPP5BP32019 993 aa12.19□□□□□ -0.46
IFT88-204ENST00000461115 PRCPP42785 496 aa12.19□□□□□ -0.46
IFT88-204ENST00000461115 USP14P54578 494 aa12.19□□□□□ -0.46
IFT88-204ENST00000461115 SPAG1Q07617 926 aa12.19□□□□□ -0.46
IFT88-204ENST00000461115 IKQ13123 557 aaPredicted RBP12.19□□□□□ -0.46
IFT88-204ENST00000461115 PAK1Q13153 545 aa12.19□□□□□ -0.46
IFT88-204ENST00000461115 TBC1D10BQ4KMP7 808 aaPredicted RBP12.19□□□□□ -0.46
IFT88-204ENST00000461115 NOL9Q5SY16 702 aaKnown RBP12.19□□□□□ -0.46
IFT88-204ENST00000461115 TMEM92Q6UXU6 159 aa12.19□□□□□ -0.46
IFT88-204ENST00000461115 UNC13DQ70J99 1090 aa12.19□□□□□ -0.46
IFT88-204ENST00000461115 SV2BQ7L1I2 683 aa12.19□□□□□ -0.46
IFT88-204ENST00000461115 SCYL3Q8IZE3 742 aa12.19□□□□□ -0.46
IFT88-204ENST00000461115 PRPF38AQ8NAV1 312 aaKnown RBP12.19□□□□□ -0.46
IFT88-204ENST00000461115 LARP4BQ92615 738 aaKnown RBP12.19□□□□□ -0.46
IFT88-204ENST00000461115 DHTKD1Q96HY7 919 aaPredicted RBP12.19□□□□□ -0.46
IFT88-204ENST00000461115 CTAGE1Q96RT6 745 aa12.19□□□□□ -0.46
IFT88-204ENST00000461115 NUDT12Q9BQG2 462 aa12.19□□□□□ -0.46
IFT88-204ENST00000461115 SPON1Q9HCB6 807 aa12.19□□□□□ -0.46
IFT88-204ENST00000461115 RTN4Q9NQC3 1192 aaKnown RBP12.19□□□□□ -0.46
IFT88-204ENST00000461115 PPP1R1BQ9UD71 204 aaPredicted RBP12.19□□□□□ -0.46
IFT88-204ENST00000461115 LOC285556D6RIA3 1793 aa12.19□□□□□ -0.46
IFT88-204ENST00000461115 ASTN2O75129 1339 aaPredicted RBP12.18□□□□□ -0.46
IFT88-204ENST00000461115 FRMPD4Q14CM0 1322 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms