RNA–Protein interactions for RNA: ENST00000461111.1

AGRN-203, Transcript of agrin, humanhuman

TSL 1 (best)

Gene AGRN, Length 3,385 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-203ENST00000461111 PLCB4Q15147 1175 aa13.74□□□□□ -0.21
AGRN-203ENST00000461111 ARMC3Q5W041 872 aa13.74□□□□□ -0.21
AGRN-203ENST00000461111 SGMS1Q86VZ5 419 aa13.74□□□□□ -0.21
AGRN-203ENST00000461111 DNAAF5Q86Y56 855 aa13.74□□□□□ -0.21
AGRN-203ENST00000461111 ENAHQ8N8S7 591 aaPredicted RBP13.74□□□□□ -0.21
AGRN-203ENST00000461111 CCDC47Q96A33 483 aaKnown RBP13.74□□□□□ -0.21
AGRN-203ENST00000461111 SAAL1Q96ER3 474 aa13.74□□□□□ -0.21
AGRN-203ENST00000461111 GOPCQ9HD26 462 aa13.74□□□□□ -0.21
AGRN-203ENST00000461111 CTNND1O60716 968 aaKnown RBP13.74□□□□□ -0.21
AGRN-203ENST00000461111 RTN2O75298 545 aa13.74□□□□□ -0.21
AGRN-203ENST00000461111 PALMO75781 387 aa13.74□□□□□ -0.21
AGRN-203ENST00000461111 HSD17B3P37058 310 aa13.74□□□□□ -0.21
AGRN-203ENST00000461111 DTHD1Q6ZMT9 781 aa13.74□□□□□ -0.21
AGRN-203ENST00000461111 ZNF507Q8TCN5 953 aa13.74□□□□□ -0.21
AGRN-203ENST00000461111 SLC39A2Q9NP94 309 aa13.74□□□□□ -0.21
AGRN-203ENST00000461111 LAMA4Q16363 1823 aa13.73□□□□□ -0.21
AGRN-203ENST00000461111 VIMP08670 466 aaKnown RBP13.73□□□□□ -0.21
AGRN-203ENST00000461111 SRGNP10124 158 aa13.73□□□□□ -0.21
AGRN-203ENST00000461111 CYP2D6P10635 497 aa13.73□□□□□ -0.21
AGRN-203ENST00000461111 PPP4R3AQ6IN85 833 aa13.73□□□□□ -0.21
AGRN-203ENST00000461111 ADSSL1Q8N142 457 aa13.73□□□□□ -0.21
AGRN-203ENST00000461111 SHISA4Q96DD7 197 aa13.73□□□□□ -0.21
AGRN-203ENST00000461111 SPAG5Q96R06 1193 aa13.73□□□□□ -0.21
AGRN-203ENST00000461111 ZSCAN10Q96SZ4 725 aaPredicted RBP13.73□□□□□ -0.21
AGRN-203ENST00000461111 TBC1D7Q9P0N9 293 aa13.73□□□□□ -0.21
AGRN-203ENST00000461111 IRF6O14896 467 aa13.73□□□□□ -0.21
AGRN-203ENST00000461111 CDC37Q16543 378 aaPredicted RBP13.73□□□□□ -0.21
AGRN-203ENST00000461111 GLE1Q53GS7 698 aaKnown RBP13.73□□□□□ -0.21
AGRN-203ENST00000461111 PRCCQ92733 491 aaPredicted RBP13.73□□□□□ -0.21
AGRN-203ENST00000461111 ELAC2Q9BQ52 826 aaKnown RBP13.73□□□□□ -0.21
AGRN-203ENST00000461111 ISCA1Q9BUE6 129 aa13.73□□□□□ -0.21
AGRN-203ENST00000461111 NUP58Q9BVL2 599 aa13.73□□□□□ -0.21
AGRN-203ENST00000461111 DPH5Q9H2P9 285 aa13.73□□□□□ -0.21
AGRN-203ENST00000461111 TMBIM4Q9HC24 238 aa13.73□□□□□ -0.21
AGRN-203ENST00000461111 CD2APQ9Y5K6 639 aa13.73□□□□□ -0.21
AGRN-203ENST00000461111 MEGF6O75095 1541 aa13.73□□□□□ -0.21
AGRN-203ENST00000461111 KCNK3O14649 394 aa13.72□□□□□ -0.21
AGRN-203ENST00000461111 CEP104O60308 925 aa13.72□□□□□ -0.21
AGRN-203ENST00000461111 EEF1GP26641 437 aaKnown RBP13.72□□□□□ -0.21
AGRN-203ENST00000461111 MEA1Q16626 185 aa13.72□□□□□ -0.21
AGRN-203ENST00000461111 GNPTABQ3T906 1256 aa13.72□□□□□ -0.21
AGRN-203ENST00000461111 ANKRD40Q6AI12 368 aa13.72□□□□□ -0.21
AGRN-203ENST00000461111 TMED8Q6PL24 325 aaPredicted RBP13.72□□□□□ -0.21
AGRN-203ENST00000461111 CCDC155Q8N6L0 562 aa13.72□□□□□ -0.21
AGRN-203ENST00000461111 MKNK2Q9HBH9 465 aa13.72□□□□□ -0.21
AGRN-203ENST00000461111 A0A1W2PQC6 194 aa13.72□□□□□ -0.21
AGRN-203ENST00000461111 LRRC53A6NM62 1247 aa13.72□□□□□ -0.21
AGRN-203ENST00000461111 TRAPPC3O43617 180 aa13.72□□□□□ -0.21
AGRN-203ENST00000461111 PDE8AO60658 829 aa13.72□□□□□ -0.21
AGRN-203ENST00000461111 PDXDC2PQ6P474 469 aa13.72□□□□□ -0.21
AGRN-203ENST00000461111 GIGYF2Q6Y7W6 1299 aaKnown RBP13.72□□□□□ -0.21
AGRN-203ENST00000461111 KIF2BQ8N4N8 673 aa13.72□□□□□ -0.21
AGRN-203ENST00000461111 TAF4BQ92750 862 aa13.72□□□□□ -0.21
AGRN-203ENST00000461111 CDK5RAP3Q96JB5 506 aa13.72□□□□□ -0.21
AGRN-203ENST00000461111 PANK4Q9NVE7 773 aa13.72□□□□□ -0.21
AGRN-203ENST00000461111 MCM9Q9NXL9 1143 aa13.72□□□□□ -0.21
AGRN-203ENST00000461111 FBXL5Q9UKA1 691 aa13.72□□□□□ -0.21
AGRN-203ENST00000461111 MST1RQ04912 1400 aa13.72□□□□□ -0.21
AGRN-203ENST00000461111 ADAMTS3O15072 1205 aa13.72□□□□□ -0.21
AGRN-203ENST00000461111 DRP2Q13474 957 aa13.72□□□□□ -0.21
AGRN-203ENST00000461111 TLDC1Q6P9B6 456 aa13.72□□□□□ -0.21
AGRN-203ENST00000461111 PIGBQ92521 554 aa13.72□□□□□ -0.21
AGRN-203ENST00000461111 NIP7Q9Y221 180 aaKnown RBP eCLIP13.72□□□□□ -0.21
AGRN-203ENST00000461111 ATXN2Q99700 1313 aaKnown RBP13.72□□□□□ -0.21
AGRN-203ENST00000461111 MYH10P35580 1976 aa13.71□□□□□ -0.21
AGRN-203ENST00000461111 TRIM37O94972 964 aa13.71□□□□□ -0.21
AGRN-203ENST00000461111 PPP2R2AP63151 447 aa13.71□□□□□ -0.21
AGRN-203ENST00000461111 IL17AQ16552 155 aa13.71□□□□□ -0.21
AGRN-203ENST00000461111 KLHDC7AQ5VTJ3 777 aa13.71□□□□□ -0.21
AGRN-203ENST00000461111 CCDC197Q8NCU1 140 aa13.71□□□□□ -0.21
AGRN-203ENST00000461111 IRAK4Q9NWZ3 460 aa13.71□□□□□ -0.21
AGRN-203ENST00000461111 PDS5AQ29RF7 1337 aaKnown RBP13.71□□□□□ -0.21
AGRN-203ENST00000461111 WDR19Q8NEZ3 1342 aa13.71□□□□□ -0.21
AGRN-203ENST00000461111 PCDH11XQ9BZA7 1347 aa13.71□□□□□ -0.21
AGRN-203ENST00000461111 PCDH11YQ9BZA8 1340 aa13.71□□□□□ -0.21
AGRN-203ENST00000461111 STK36Q9NRP7 1315 aa13.71□□□□□ -0.21
AGRN-203ENST00000461111 FLT3P36888 993 aa13.71□□□□□ -0.21
AGRN-203ENST00000461111 HSPA2P54652 639 aa13.71□□□□□ -0.21
AGRN-203ENST00000461111 LRRC41Q15345 812 aa13.71□□□□□ -0.21
AGRN-203ENST00000461111 BZW1Q7L1Q6 419 aaKnown RBP13.71□□□□□ -0.21
AGRN-203ENST00000461111 ADAT2Q7Z6V5 191 aaKnown RBP13.71□□□□□ -0.21
AGRN-203ENST00000461111 ADGRA1Q86SQ6 560 aa13.71□□□□□ -0.21
AGRN-203ENST00000461111 TRPC6Q9Y210 931 aa13.71□□□□□ -0.21
AGRN-203ENST00000461111 WDR17Q8IZU2 1322 aa13.71□□□□□ -0.21
AGRN-203ENST00000461111 FCER1AP12319 257 aa13.71□□□□□ -0.22
AGRN-203ENST00000461111 GDF3Q9NR23 364 aa13.71□□□□□ -0.22
AGRN-203ENST00000461111 RBM28Q9NW13 759 aaKnown RBP13.71□□□□□ -0.22
AGRN-203ENST00000461111 MPHOSPH10O00566 681 aaKnown RBP13.7□□□□□ -0.22
AGRN-203ENST00000461111 SPICE1Q8N0Z3 855 aa13.7□□□□□ -0.22
AGRN-203ENST00000461111 AGAP11Q8TF27 550 aa13.7□□□□□ -0.22
AGRN-203ENST00000461111 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.7□□□□□ -0.22
AGRN-203ENST00000461111 DDX47Q9H0S4 455 aaKnown RBP13.7□□□□□ -0.22
AGRN-203ENST00000461111 LRRC4CQ9HCJ2 640 aa13.7□□□□□ -0.22
AGRN-203ENST00000461111 CCT8L1PA6NM43 557 aa13.7□□□□□ -0.22
AGRN-203ENST00000461111 TXKP42681 527 aa13.7□□□□□ -0.22
AGRN-203ENST00000461111 ERVK-9P63128 1117 aa13.7□□□□□ -0.22
AGRN-203ENST00000461111 ZNF844Q08AG5 666 aa13.7□□□□□ -0.22
AGRN-203ENST00000461111 SRBD1Q8N5C6 995 aaKnown RBP13.7□□□□□ -0.22
AGRN-203ENST00000461111 ANKS4BQ8N8V4 417 aa13.7□□□□□ -0.22
AGRN-203ENST00000461111 WHAMMQ8TF30 809 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms