RNA–Protein interactions for RNA: ENST00000460945.5

APTX-210, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-210ENST00000460945 DDX41Q9UJV9 622 aaKnown RBP19.12■□□□□ 0.65
APTX-210ENST00000460945 SCN5AQ14524 2016 aa19.12■□□□□ 0.65
APTX-210ENST00000460945 hCG_1642624A0A1W2PR95 340 aa19.11■□□□□ 0.65
APTX-210ENST00000460945 GH1P01241 217 aa19.11■□□□□ 0.65
APTX-210ENST00000460945 NEFLP07196 543 aa19.11■□□□□ 0.65
APTX-210ENST00000460945 CALM1P0DP23 149 aa19.11■□□□□ 0.65
APTX-210ENST00000460945 CALM2P0DP24 149 aa19.11■□□□□ 0.65
APTX-210ENST00000460945 CALM3P0DP25 149 aa19.11■□□□□ 0.65
APTX-210ENST00000460945 SMARCA1P28370 1054 aa19.11■□□□□ 0.65
APTX-210ENST00000460945 NBPF20Q3BBV1 942 aa19.11■□□□□ 0.65
APTX-210ENST00000460945 TSGA10IPQ3SY00 556 aa19.11■□□□□ 0.65
APTX-210ENST00000460945 GPR153Q6NV75 609 aa19.11■□□□□ 0.65
APTX-210ENST00000460945 DHX32Q7L7V1 743 aaKnown RBP19.11■□□□□ 0.65
APTX-210ENST00000460945 VSIG10LQ86VR7 867 aa19.11■□□□□ 0.65
APTX-210ENST00000460945 MICU3Q86XE3 530 aa19.11■□□□□ 0.65
APTX-210ENST00000460945 CCDC82Q8N4S0 544 aa19.11■□□□□ 0.65
APTX-210ENST00000460945 FANCBQ8NB91 859 aa19.11■□□□□ 0.65
APTX-210ENST00000460945 LZTS2Q9BRK4 669 aa19.11■□□□□ 0.65
APTX-210ENST00000460945 ALDH8A1Q9H2A2 487 aaPredicted RBP19.11■□□□□ 0.65
APTX-210ENST00000460945 TRMT13Q9NUP7 481 aaKnown RBP19.11■□□□□ 0.65
APTX-210ENST00000460945 MMP3P08254 477 aa19.1■□□□□ 0.65
APTX-210ENST00000460945 CSF2RAP15509 400 aa19.1■□□□□ 0.65
APTX-210ENST00000460945 C16orf59Q7L2K0 433 aa19.1■□□□□ 0.65
APTX-210ENST00000460945 SEZ6LQ9BYH1 1024 aa19.1■□□□□ 0.65
APTX-210ENST00000460945 MRVI1Q9Y6F6 885 aa19.1■□□□□ 0.65
APTX-210ENST00000460945 SORBS3O60504 671 aa19.09■□□□□ 0.65
APTX-210ENST00000460945 KPNA6O60684 536 aa19.09■□□□□ 0.65
APTX-210ENST00000460945 ACRP10323 421 aa19.09■□□□□ 0.65
APTX-210ENST00000460945 CPA1P15085 419 aa19.09■□□□□ 0.65
APTX-210ENST00000460945 CHMP4BP1P59074 171 aa19.09■□□□□ 0.65
APTX-210ENST00000460945 PPIGQ13427 754 aaKnown RBP eCLIP19.09■□□□□ 0.65
APTX-210ENST00000460945 FAM47CQ5HY64 1035 aa19.09■□□□□ 0.65
APTX-210ENST00000460945 USP17L6PQ6QN14 398 aa19.09■□□□□ 0.65
APTX-210ENST00000460945 GPKOWQ92917 476 aaPredicted RBP eCLIP19.09■□□□□ 0.65
APTX-210ENST00000460945 RNPC3Q96LT9 517 aaKnown RBP19.09■□□□□ 0.65
APTX-210ENST00000460945 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.09■□□□□ 0.65
APTX-210ENST00000460945 HIPK3Q9H422 1215 aa19.09■□□□□ 0.65
APTX-210ENST00000460945 SEC63Q9UGP8 760 aaKnown RBP19.09■□□□□ 0.65
APTX-210ENST00000460945 BRPF3Q9ULD4 1205 aa19.09■□□□□ 0.65
APTX-210ENST00000460945 GBF1Q92538 1859 aa19.08■□□□□ 0.65
APTX-210ENST00000460945 CYP2C9P11712 490 aa19.08■□□□□ 0.64
APTX-210ENST00000460945 CCND2P30279 289 aa19.08■□□□□ 0.64
APTX-210ENST00000460945 CCL23P55773 120 aa19.08■□□□□ 0.64
APTX-210ENST00000460945 SP2Q02086 613 aa19.08■□□□□ 0.64
APTX-210ENST00000460945 APOA5Q6Q788 366 aa19.08■□□□□ 0.64
APTX-210ENST00000460945 TMTC3Q6ZXV5 915 aa19.08■□□□□ 0.64
APTX-210ENST00000460945 TMEM199Q8N511 208 aa19.08■□□□□ 0.64
APTX-210ENST00000460945 KCNB2Q92953 911 aa19.08■□□□□ 0.64
APTX-210ENST00000460945 NOC4LQ9BVI4 516 aaKnown RBP19.08■□□□□ 0.64
APTX-210ENST00000460945 MTMR10Q9NXD2 777 aa19.08■□□□□ 0.64
APTX-210ENST00000460945 MEIS2O14770 477 aa19.07■□□□□ 0.64
APTX-210ENST00000460945 MRPS9P82933 396 aaKnown RBP19.07■□□□□ 0.64
APTX-210ENST00000460945 KRT32Q14532 448 aa19.07■□□□□ 0.64
APTX-210ENST00000460945 TMEM240Q5SV17 173 aa19.07■□□□□ 0.64
APTX-210ENST00000460945 SYNE3Q6ZMZ3 975 aa19.07■□□□□ 0.64
APTX-210ENST00000460945 DHX37Q8IY37 1157 aaKnown RBP19.07■□□□□ 0.64
APTX-210ENST00000460945 SMARCC2Q8TAQ2 1214 aa19.07■□□□□ 0.64
APTX-210ENST00000460945 KAT2BQ92831 832 aa19.07■□□□□ 0.64
APTX-210ENST00000460945 WNT8AQ9H1J5 351 aa19.07■□□□□ 0.64
APTX-210ENST00000460945 SNX14Q9Y5W7 946 aa19.07■□□□□ 0.64
APTX-210ENST00000460945 FRMPD4Q14CM0 1322 aa19.06■□□□□ 0.64
APTX-210ENST00000460945 HSPA4P34932 840 aa19.06■□□□□ 0.64
APTX-210ENST00000460945 LAMC2Q13753 1193 aa19.06■□□□□ 0.64
APTX-210ENST00000460945 NFRKBQ6P4R8 1299 aa19.06■□□□□ 0.64
APTX-210ENST00000460945 CUL5Q93034 780 aa19.06■□□□□ 0.64
APTX-210ENST00000460945 FAM161BQ96MY7 647 aa19.06■□□□□ 0.64
APTX-210ENST00000460945 JAKMIP1Q96N16 626 aaKnown RBP19.06■□□□□ 0.64
APTX-210ENST00000460945 BCAS3Q9H6U6 928 aa19.06■□□□□ 0.64
APTX-210ENST00000460945 RTEL1Q9NZ71 1219 aa19.06■□□□□ 0.64
APTX-210ENST00000460945 TANC1Q9C0D5 1861 aa19.05■□□□□ 0.64
APTX-210ENST00000460945 CNTNAP5Q8WYK1 1306 aa19.05■□□□□ 0.64
APTX-210ENST00000460945 PIK3CDO00329 1044 aa19.05■□□□□ 0.64
APTX-210ENST00000460945 ZBTB43O43298 467 aa19.05■□□□□ 0.64
APTX-210ENST00000460945 GGPS1O95749 300 aa19.05■□□□□ 0.64
APTX-210ENST00000460945 CASTP20810 708 aaKnown RBP19.05■□□□□ 0.64
APTX-210ENST00000460945 DGKDQ16760 1214 aa19.05■□□□□ 0.64
APTX-210ENST00000460945 CELF3Q5SZQ8 465 aaKnown RBP19.05■□□□□ 0.64
APTX-210ENST00000460945 MYSM1Q5VVJ2 828 aa19.05■□□□□ 0.64
APTX-210ENST00000460945 KCNV1Q6PIU1 500 aa19.05■□□□□ 0.64
APTX-210ENST00000460945 ZNF365Q70YC5 407 aa19.05■□□□□ 0.64
APTX-210ENST00000460945 EMID1Q96A84 441 aaPredicted RBP19.05■□□□□ 0.64
APTX-210ENST00000460945 SCLYQ96I15 445 aa19.05■□□□□ 0.64
APTX-210ENST00000460945 IL23AQ9NPF7 189 aa19.05■□□□□ 0.64
APTX-210ENST00000460945 CDH23Q9H251 3354 aa19.05■□□□□ 0.64
APTX-210ENST00000460945 KLF18A0A0U1RQI7 1052 aa19.04■□□□□ 0.64
APTX-210ENST00000460945 SUPT20HL2P0C7V6 817 aa19.04■□□□□ 0.64
APTX-210ENST00000460945 ZNF286BP0CG31 522 aa19.04■□□□□ 0.64
APTX-210ENST00000460945 UBA1P22314 1058 aaKnown RBP19.04■□□□□ 0.64
APTX-210ENST00000460945 UBE2SQ16763 222 aa19.04■□□□□ 0.64
APTX-210ENST00000460945 RTN1Q16799 776 aa19.04■□□□□ 0.64
APTX-210ENST00000460945 FAM109BQ6ICB4 259 aaPredicted RBP19.04■□□□□ 0.64
APTX-210ENST00000460945 Q6ZUG5 572 aa19.04■□□□□ 0.64
APTX-210ENST00000460945 HEATR3Q7Z4Q2 680 aa19.04■□□□□ 0.64
APTX-210ENST00000460945 PPTC7Q8NI37 304 aa19.04■□□□□ 0.64
APTX-210ENST00000460945 PSTPIP2Q9H939 334 aa19.04■□□□□ 0.64
APTX-210ENST00000460945 TET1Q8NFU7 2136 aa19.04■□□□□ 0.64
APTX-210ENST00000460945 GOLGA8AA7E2F4 631 aa19.03■□□□□ 0.64
APTX-210ENST00000460945 GOLGA8BA8MQT2 603 aa19.03■□□□□ 0.64
APTX-210ENST00000460945 HMGB1P09429 215 aaKnown RBP19.03■□□□□ 0.64
APTX-210ENST00000460945 CDC27P30260 824 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms