RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 LSM7Q9UK45 103 aaKnown RBP6.85□□□□□ -1.31
HLA-DQA1-205ENST00000460633 KDM3AQ9Y4C1 1321 aa6.85□□□□□ -1.31
HLA-DQA1-205ENST00000460633 CRYBG1Q9Y4K1 1723 aa6.85□□□□□ -1.31
HLA-DQA1-205ENST00000460633 CAMTA2O94983 1202 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 P4HBP07237 508 aaKnown RBP6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 CLNS1AP54105 237 aaKnown RBP6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 NLRP12P59046 1061 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 IRX5P78411 483 aaPredicted RBP6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 ICA1Q05084 483 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 DEFB115Q30KQ5 88 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 CPLX4Q7Z7G2 160 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 PGBD3Q8N328 593 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 PARD3BQ8TEW8 1205 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 MMP19Q99542 508 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 TEKT3Q9BXF9 490 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 ZNRF3Q9ULT6 936 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 RGPD3A6NKT7 1758 aaPredicted RBP6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 RGPD4Q7Z3J3 1758 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 CCDC169A6NNP5 214 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 EFCAB8A8MWE9 144 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 C19orf81C9J6K1 198 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 EVI5O60447 810 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 SLC25A27O95847 323 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 EPB41P11171 864 aaKnown RBP6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 ST8SIA6P61647 398 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 SATB1Q01826 763 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 SP4Q02446 784 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 PEX6Q13608 980 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 ME3Q16798 604 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 ATL3Q6DD88 541 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 IGSF22Q8N9C0 903 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 MTMR6Q9Y217 621 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 JRKLQ9Y4A0 524 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 C5P01031 1676 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 A0A1B0GUA9 196 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 EIF3CLB5ME19 914 aaKnown RBP6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 ARHGAP6O43182 974 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 ALAS1P13196 640 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 CCDC122Q5T0U0 273 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 ARMCX2Q7L311 632 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 ANKS4BQ8N8V4 417 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 AKT1S1Q96B36 256 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 RWDD3Q9Y3V2 267 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 ELP1O95163 1332 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 RPAP1Q9BWH6 1393 aaPredicted RBP6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 MEI4A8MW99 385 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 STXBP3O00186 592 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 N4BP1O75113 896 aaKnown RBP6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 MYBL2P10244 700 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 NPY2RP49146 381 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 PPARDQ03181 441 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 BRD3Q15059 726 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 DHX32Q7L7V1 743 aaKnown RBP6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 PPP1R13BQ96KQ4 1090 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 GLT1D1Q96MS3 346 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 GDAP1L1Q96MZ0 367 aa6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 UTP6Q9NYH9 597 aaKnown RBP6.84□□□□□ -1.31
HLA-DQA1-205ENST00000460633 MACROD2A1Z1Q3 448 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 H7C1W4 665 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 JAK2O60674 1132 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 S100BP04271 92 aaPredicted RBP6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 TMEM132BQ14DG7 1078 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 VWA3BQ502W6 1294 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 SLC9C2Q5TAH2 1124 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 CHADLQ6NUI6 762 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 RSRC2Q7L4I2 434 aaKnown RBP6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 CNGA4Q8IV77 575 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 SLFN12Q8IYM2 578 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 PDLIM2Q96JY6 352 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 GBA2Q9HCG7 927 aaPredicted RBP6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 PDE11AQ9HCR9 933 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 PCDHB9Q9Y5E1 797 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 PCDHA1Q9Y5I3 950 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 FLT1P17948 1338 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 USP17L15C9J2P7 530 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 USP17L13C9JLJ4 530 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 USP17L11C9JVI0 530 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 USP17L18D6R9N7 530 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 USP17L22D6RA61 530 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 USP17L17D6RBQ6 530 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 USP17L19D6RCP7 530 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 USP17L20D6RJB6 530 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 RNF113AO15541 343 aaKnown RBP6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 KRT2P35908 639 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 LIG3P49916 1009 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 USP17L24Q0WX57 530 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 TUBB2AQ13885 445 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 LONRF3Q496Y0 759 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 FBXO38Q6PIJ6 1188 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 BRAPQ7Z569 592 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 TMEM199Q8N511 208 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 PPP1R14CQ8TAE6 165 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 MRFAP1L1Q96HT8 127 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 CALR3Q96L12 384 aaKnown RBP6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 SELENOSQ9BQE4 189 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 TUBB2BQ9BVA1 445 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 ANO3Q9BYT9 981 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 FAM204AQ9H8W3 233 aa6.83□□□□□ -1.32
HLA-DQA1-205ENST00000460633 TRIM45Q9H8W5 580 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms