RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 NOC4LQ9BVI4 516 aaKnown RBP17.13■□□□□ 0.33
SSR4-206ENST00000460616 ARHGAP20Q9P2F6 1191 aa17.13■□□□□ 0.33
SSR4-206ENST00000460616 PLAGL2Q9UPG8 496 aa17.13■□□□□ 0.33
SSR4-206ENST00000460616 TNRC6CQ9HCJ0 1690 aaKnown RBP17.13■□□□□ 0.33
SSR4-206ENST00000460616 TNKSO95271 1327 aa17.13■□□□□ 0.33
SSR4-206ENST00000460616 TAF1P21675 1872 aa17.13■□□□□ 0.33
SSR4-206ENST00000460616 RTL9Q8NET4 1388 aa17.13■□□□□ 0.33
SSR4-206ENST00000460616 CCDC189A1A4V9 331 aa17.13■□□□□ 0.33
SSR4-206ENST00000460616 PLEKHA8P1O95397 391 aa17.13■□□□□ 0.33
SSR4-206ENST00000460616 GCFC2P16383 781 aaKnown RBP17.13■□□□□ 0.33
SSR4-206ENST00000460616 LONP1P36776 959 aaKnown RBP17.13■□□□□ 0.33
SSR4-206ENST00000460616 PARP10Q53GL7 1025 aa17.13■□□□□ 0.33
SSR4-206ENST00000460616 GIMAP8Q8ND71 665 aaPredicted RBP17.13■□□□□ 0.33
SSR4-206ENST00000460616 DUSP9Q99956 384 aaKnown RBP17.13■□□□□ 0.33
SSR4-206ENST00000460616 PLA2G12BQ9BX93 195 aa17.13■□□□□ 0.33
SSR4-206ENST00000460616 TLR10Q9BXR5 811 aa17.13■□□□□ 0.33
SSR4-206ENST00000460616 DDX20Q9UHI6 824 aaKnown RBP17.13■□□□□ 0.33
SSR4-206ENST00000460616 ZSCAN5CA6NGD5 496 aaPredicted RBP17.12■□□□□ 0.33
SSR4-206ENST00000460616 IRS4O14654 1257 aaPredicted RBP17.12■□□□□ 0.33
SSR4-206ENST00000460616 AKR1B10O60218 316 aa17.12■□□□□ 0.33
SSR4-206ENST00000460616 PDE8BO95263 885 aa17.12■□□□□ 0.33
SSR4-206ENST00000460616 ITGA6P23229 1130 aa17.12■□□□□ 0.33
SSR4-206ENST00000460616 HPDP32754 393 aaPredicted RBP17.12■□□□□ 0.33
SSR4-206ENST00000460616 EIF4A3P38919 411 aaKnown RBP17.12■□□□□ 0.33
SSR4-206ENST00000460616 SEC23AQ15436 765 aa17.12■□□□□ 0.33
SSR4-206ENST00000460616 ERFEQ4G0M1 354 aa17.12■□□□□ 0.33
SSR4-206ENST00000460616 CYB5D1Q6P9G0 228 aa17.12■□□□□ 0.33
SSR4-206ENST00000460616 FUKQ8N0W3 1084 aa17.12■□□□□ 0.33
SSR4-206ENST00000460616 DHTKD1Q96HY7 919 aaPredicted RBP17.12■□□□□ 0.33
SSR4-206ENST00000460616 GNAT2P19087 354 aa17.12■□□□□ 0.33
SSR4-206ENST00000460616 HNRNPH3P31942 346 aaKnown RBP17.12■□□□□ 0.33
SSR4-206ENST00000460616 TRAPPC10P48553 1259 aa17.12■□□□□ 0.33
SSR4-206ENST00000460616 MAATS1Q7Z4T9 603 aa17.12■□□□□ 0.33
SSR4-206ENST00000460616 CCDC155Q8N6L0 562 aa17.12■□□□□ 0.33
SSR4-206ENST00000460616 ANKRD13CQ8N6S4 541 aa17.12■□□□□ 0.33
SSR4-206ENST00000460616 RASSF8Q8NHQ8 419 aa17.12■□□□□ 0.33
SSR4-206ENST00000460616 CNOT6LQ96LI5 555 aaKnown RBP17.12■□□□□ 0.33
SSR4-206ENST00000460616 ERGIC2Q96RQ1 377 aa17.12■□□□□ 0.33
SSR4-206ENST00000460616 DISC1Q9NRI5 854 aa17.12■□□□□ 0.33
SSR4-206ENST00000460616 COL4A1P02462 1669 aa17.12■□□□□ 0.33
SSR4-206ENST00000460616 GMNCA6NCL1 334 aa17.11■□□□□ 0.33
SSR4-206ENST00000460616 GOLGA6L10A6NI86 522 aa17.11■□□□□ 0.33
SSR4-206ENST00000460616 RHOBTB3O94955 611 aa17.11■□□□□ 0.33
SSR4-206ENST00000460616 PDHBP11177 359 aa17.11■□□□□ 0.33
SSR4-206ENST00000460616 MAGEA1P43355 309 aa17.11■□□□□ 0.33
SSR4-206ENST00000460616 MRPL12P52815 198 aaKnown RBP17.11■□□□□ 0.33
SSR4-206ENST00000460616 ARL6IP4Q66PJ3 421 aaKnown RBP17.11■□□□□ 0.33
SSR4-206ENST00000460616 FAM114A1Q8IWE2 563 aa17.11■□□□□ 0.33
SSR4-206ENST00000460616 LCORLQ8N3X6 602 aa17.11■□□□□ 0.33
SSR4-206ENST00000460616 ARFGAP2Q8N6H7 521 aa17.11■□□□□ 0.33
SSR4-206ENST00000460616 VGLL2Q8N8G2 317 aa17.11■□□□□ 0.33
SSR4-206ENST00000460616 SPATA5Q8NB90 893 aa17.11■□□□□ 0.33
SSR4-206ENST00000460616 RNF14Q9UBS8 474 aa17.11■□□□□ 0.33
SSR4-206ENST00000460616 AKAP11Q9UKA4 1901 aa17.11■□□□□ 0.33
SSR4-206ENST00000460616 KLRC4O43908 158 aa17.11■□□□□ 0.33
SSR4-206ENST00000460616 LCA5LO95447 670 aa17.11■□□□□ 0.33
SSR4-206ENST00000460616 SSBP05455 408 aaKnown RBP eCLIP17.11■□□□□ 0.33
SSR4-206ENST00000460616 EZRP15311 586 aaKnown RBP17.11■□□□□ 0.33
SSR4-206ENST00000460616 MIIPQ5JXC2 388 aa17.11■□□□□ 0.33
SSR4-206ENST00000460616 C3orf67Q6ZVT6 689 aa17.11■□□□□ 0.33
SSR4-206ENST00000460616 CATIPQ7Z7H3 387 aa17.11■□□□□ 0.33
SSR4-206ENST00000460616 WHAMMQ8TF30 809 aa17.11■□□□□ 0.33
SSR4-206ENST00000460616 ESR2Q92731 530 aa17.11■□□□□ 0.33
SSR4-206ENST00000460616 GREM2Q9H772 168 aa17.11■□□□□ 0.33
SSR4-206ENST00000460616 SALL4Q9UJQ4 1053 aa17.11■□□□□ 0.33
SSR4-206ENST00000460616 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.11■□□□□ 0.33
SSR4-206ENST00000460616 DNM1LO00429 736 aa17.1■□□□□ 0.33
SSR4-206ENST00000460616 RGL2O15211 777 aa17.1■□□□□ 0.33
SSR4-206ENST00000460616 HMGB2P26583 209 aaKnown RBP17.1■□□□□ 0.33
SSR4-206ENST00000460616 TM4SF1P30408 202 aa17.1■□□□□ 0.33
SSR4-206ENST00000460616 SATB1Q01826 763 aa17.1■□□□□ 0.33
SSR4-206ENST00000460616 KLHDC7AQ5VTJ3 777 aa17.1■□□□□ 0.33
SSR4-206ENST00000460616 ANKRD40Q6AI12 368 aa17.1■□□□□ 0.33
SSR4-206ENST00000460616 NBPF5PQ86XG9 351 aaPredicted RBP17.1■□□□□ 0.33
SSR4-206ENST00000460616 FLAD1Q8NFF5 587 aa17.1■□□□□ 0.33
SSR4-206ENST00000460616 MAGEC3Q8TD91 643 aa17.1■□□□□ 0.33
SSR4-206ENST00000460616 SGSM3Q96HU1 749 aa17.1■□□□□ 0.33
SSR4-206ENST00000460616 SCLT1Q96NL6 688 aa17.1■□□□□ 0.33
SSR4-206ENST00000460616 PLAAQ9Y263 795 aa17.1■□□□□ 0.33
SSR4-206ENST00000460616 ANKRD18BA2A2Z9 1011 aa17.1■□□□□ 0.33
SSR4-206ENST00000460616 NLRP5P59047 1200 aa17.1■□□□□ 0.33
SSR4-206ENST00000460616 NAALADL2Q58DX5 795 aa17.1■□□□□ 0.33
SSR4-206ENST00000460616 FAM228AQ86W67 206 aa17.1■□□□□ 0.33
SSR4-206ENST00000460616 ZSCAN29Q8IWY8 852 aaPredicted RBP17.1■□□□□ 0.33
SSR4-206ENST00000460616 CASKIN2Q8WXE0 1202 aa17.1■□□□□ 0.33
SSR4-206ENST00000460616 P2RX5Q93086 422 aa17.1■□□□□ 0.33
SSR4-206ENST00000460616 IQCDQ96DY2 449 aa17.1■□□□□ 0.33
SSR4-206ENST00000460616 NOX5Q96PH1 765 aa17.1■□□□□ 0.33
SSR4-206ENST00000460616 OSBPL7Q9BZF2 842 aa17.1■□□□□ 0.33
SSR4-206ENST00000460616 TMBIM4Q9HC24 238 aa17.1■□□□□ 0.33
SSR4-206ENST00000460616 RBM28Q9NW13 759 aaKnown RBP17.1■□□□□ 0.33
SSR4-206ENST00000460616 TSKSQ9UJT2 592 aa17.1■□□□□ 0.33
SSR4-206ENST00000460616 BICDL2A1A5D9 508 aa17.09■□□□□ 0.33
SSR4-206ENST00000460616 MINDY4BA8MYZ0 360 aa17.09■□□□□ 0.33
SSR4-206ENST00000460616 CRYMQ14894 314 aa17.09■□□□□ 0.33
SSR4-206ENST00000460616 ENAHQ8N8S7 591 aaPredicted RBP17.09■□□□□ 0.33
SSR4-206ENST00000460616 C3orf20Q8ND61 904 aa17.09■□□□□ 0.33
SSR4-206ENST00000460616 BUB1O43683 1085 aa17.09■□□□□ 0.33
SSR4-206ENST00000460616 MYL1P05976 194 aa17.09■□□□□ 0.33
SSR4-206ENST00000460616 CCNE1P24864 410 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms