RNA–Protein interactions for RNA: ENST00000460176.6

GARNL3-211, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-211ENST00000460176 FOXP1Q9H334 677 aaPredicted RBP11.71□□□□□ -0.53
GARNL3-211ENST00000460176 BRMS1Q9HCU9 246 aa11.71□□□□□ -0.53
GARNL3-211ENST00000460176 SLC5A4Q9NY91 659 aa11.71□□□□□ -0.53
GARNL3-211ENST00000460176 MTMR6Q9Y217 621 aa11.71□□□□□ -0.53
GARNL3-211ENST00000460176 PTPN22Q9Y2R2 807 aa11.71□□□□□ -0.53
GARNL3-211ENST00000460176 VPS37CA5D8V6 355 aaPredicted RBP11.7□□□□□ -0.54
GARNL3-211ENST00000460176 STX6O43752 255 aa11.7□□□□□ -0.54
GARNL3-211ENST00000460176 EDIL3O43854 480 aa11.7□□□□□ -0.54
GARNL3-211ENST00000460176 U2AF2P26368 475 aaKnown RBP eCLIP11.7□□□□□ -0.54
GARNL3-211ENST00000460176 SREBF1P36956 1147 aa11.7□□□□□ -0.54
GARNL3-211ENST00000460176 UBXN2AP68543 259 aa11.7□□□□□ -0.54
GARNL3-211ENST00000460176 PGM5Q15124 567 aa11.7□□□□□ -0.54
GARNL3-211ENST00000460176 OLFML2BQ68BL8 750 aa11.7□□□□□ -0.54
GARNL3-211ENST00000460176 KRT25Q7Z3Z0 450 aa11.7□□□□□ -0.54
GARNL3-211ENST00000460176 MSL3Q8N5Y2 521 aaKnown RBP11.7□□□□□ -0.54
GARNL3-211ENST00000460176 ZNF579Q8NAF0 562 aaKnown RBP11.7□□□□□ -0.54
GARNL3-211ENST00000460176 IWS1Q96ST2 819 aa11.7□□□□□ -0.54
GARNL3-211ENST00000460176 EHMT1Q9H9B1 1298 aa11.7□□□□□ -0.54
GARNL3-211ENST00000460176 PRDM10Q9NQV6 1147 aa11.7□□□□□ -0.54
GARNL3-211ENST00000460176 PTCH2Q9Y6C5 1203 aa11.7□□□□□ -0.54
GARNL3-211ENST00000460176 SYNGAP1Q96PV0 1343 aa11.69□□□□□ -0.54
GARNL3-211ENST00000460176 CCDC194A0A1B0GVG4 234 aa11.69□□□□□ -0.54
GARNL3-211ENST00000460176 ASB14A6NK59 587 aa11.69□□□□□ -0.54
GARNL3-211ENST00000460176 TULP1O00294 542 aaPredicted RBP11.69□□□□□ -0.54
GARNL3-211ENST00000460176 ADCY3O60266 1144 aa11.69□□□□□ -0.54
GARNL3-211ENST00000460176 SNAI1O95863 264 aaPredicted RBP11.69□□□□□ -0.54
GARNL3-211ENST00000460176 NR3C2P08235 984 aa11.69□□□□□ -0.54
GARNL3-211ENST00000460176 ELNP15502 786 aa11.69□□□□□ -0.54
GARNL3-211ENST00000460176 MRPS9P82933 396 aaKnown RBP11.69□□□□□ -0.54
GARNL3-211ENST00000460176 ARHGAP4P98171 946 aa11.69□□□□□ -0.54
GARNL3-211ENST00000460176 RESTQ13127 1097 aa11.69□□□□□ -0.54
GARNL3-211ENST00000460176 PKP1Q13835 747 aa11.69□□□□□ -0.54
GARNL3-211ENST00000460176 NONOQ15233 471 aaKnown RBP eCLIP11.69□□□□□ -0.54
GARNL3-211ENST00000460176 PCNX4Q63HM2 1172 aa11.69□□□□□ -0.54
GARNL3-211ENST00000460176 PIK3AP1Q6ZUJ8 805 aa11.69□□□□□ -0.54
GARNL3-211ENST00000460176 ARMCX2Q7L311 632 aa11.69□□□□□ -0.54
GARNL3-211ENST00000460176 VSIG10LQ86VR7 867 aa11.69□□□□□ -0.54
GARNL3-211ENST00000460176 NOSTRINQ8IVI9 506 aa11.69□□□□□ -0.54
GARNL3-211ENST00000460176 TRMT44Q8IYL2 757 aaKnown RBP11.69□□□□□ -0.54
GARNL3-211ENST00000460176 RAET1EQ8TD07 263 aa11.69□□□□□ -0.54
GARNL3-211ENST00000460176 PXYLP1Q8TE99 480 aa11.69□□□□□ -0.54
GARNL3-211ENST00000460176 TBCKQ8TEA7 893 aa11.69□□□□□ -0.54
GARNL3-211ENST00000460176 IPO9Q96P70 1041 aaKnown RBP11.69□□□□□ -0.54
GARNL3-211ENST00000460176 TINF2Q9BSI4 451 aa11.69□□□□□ -0.54
GARNL3-211ENST00000460176 KATNBL1Q9H079 304 aa11.69□□□□□ -0.54
GARNL3-211ENST00000460176 FRMPD3Q5JV73 1810 aa11.68□□□□□ -0.54
GARNL3-211ENST00000460176 CYP3A4P08684 503 aa11.68□□□□□ -0.54
GARNL3-211ENST00000460176 MYCLP12524 364 aaPredicted RBP11.68□□□□□ -0.54
GARNL3-211ENST00000460176 PDIA4P13667 645 aaKnown RBP11.68□□□□□ -0.54
GARNL3-211ENST00000460176 CCND2P30279 289 aa11.68□□□□□ -0.54
GARNL3-211ENST00000460176 CYP2C19P33261 490 aa11.68□□□□□ -0.54
GARNL3-211ENST00000460176 PDE4DQ08499 809 aa11.68□□□□□ -0.54
GARNL3-211ENST00000460176 TRIM32Q13049 653 aa11.68□□□□□ -0.54
GARNL3-211ENST00000460176 GNL2Q13823 731 aaKnown RBP11.68□□□□□ -0.54
GARNL3-211ENST00000460176 INF2Q27J81 1249 aa11.68□□□□□ -0.54
GARNL3-211ENST00000460176 MCTP1Q6DN14 999 aa11.68□□□□□ -0.54
GARNL3-211ENST00000460176 XRRA1Q6P2D8 792 aa11.68□□□□□ -0.54
GARNL3-211ENST00000460176 FERMT3Q86UX7 667 aa11.68□□□□□ -0.54
GARNL3-211ENST00000460176 SLAIN1Q8ND83 568 aa11.68□□□□□ -0.54
GARNL3-211ENST00000460176 MPHOSPH6Q99547 160 aaKnown RBP11.68□□□□□ -0.54
GARNL3-211ENST00000460176 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.68□□□□□ -0.54
GARNL3-211ENST00000460176 DAXXQ9UER7 740 aaPredicted RBP11.68□□□□□ -0.54
GARNL3-211ENST00000460176 B4DLN1 442 aa11.67□□□□□ -0.54
GARNL3-211ENST00000460176 EIF3JO75822 258 aaKnown RBP11.67□□□□□ -0.54
GARNL3-211ENST00000460176 HMGCRP04035 888 aa11.67□□□□□ -0.54
GARNL3-211ENST00000460176 ZSCAN22P10073 491 aaPredicted RBP11.67□□□□□ -0.54
GARNL3-211ENST00000460176 GRK4P32298 578 aa11.67□□□□□ -0.54
GARNL3-211ENST00000460176 USP11P51784 963 aa11.67□□□□□ -0.54
GARNL3-211ENST00000460176 STXBP2Q15833 593 aa11.67□□□□□ -0.54
GARNL3-211ENST00000460176 FBXO46Q6PJ61 603 aaPredicted RBP11.67□□□□□ -0.54
GARNL3-211ENST00000460176 ZDHHC9Q9Y397 364 aa11.67□□□□□ -0.54
GARNL3-211ENST00000460176 UBIAD1Q9Y5Z9 338 aa11.67□□□□□ -0.54
GARNL3-211ENST00000460176 DOCK5Q9H7D0 1870 aa11.67□□□□□ -0.54
GARNL3-211ENST00000460176 IGLV3-22A0A075B6J6 115 aa11.66□□□□□ -0.54
GARNL3-211ENST00000460176 WNT7AO00755 349 aa11.66□□□□□ -0.54
GARNL3-211ENST00000460176 STAM2O75886 525 aa11.66□□□□□ -0.54
GARNL3-211ENST00000460176 RGS20O76081 388 aa11.66□□□□□ -0.54
GARNL3-211ENST00000460176 TDP2O95551 362 aa11.66□□□□□ -0.54
GARNL3-211ENST00000460176 BRD1O95696 1058 aa11.66□□□□□ -0.54
GARNL3-211ENST00000460176 INHAP05111 366 aa11.66□□□□□ -0.54
GARNL3-211ENST00000460176 ZNF865P0CJ78 1059 aaPredicted RBP11.66□□□□□ -0.54
GARNL3-211ENST00000460176 ITGB5P18084 799 aa11.66□□□□□ -0.54
GARNL3-211ENST00000460176 CIITAP33076 1130 aa11.66□□□□□ -0.54
GARNL3-211ENST00000460176 TOB1P50616 345 aaPredicted RBP11.66□□□□□ -0.54
GARNL3-211ENST00000460176 CACNB2Q08289 660 aaPredicted RBP11.66□□□□□ -0.54
GARNL3-211ENST00000460176 PKN2Q16513 984 aaKnown RBP11.66□□□□□ -0.54
GARNL3-211ENST00000460176 PRAMEF19Q5SWL8 479 aa11.66□□□□□ -0.54
GARNL3-211ENST00000460176 MAP3K21Q5TCX8 1036 aa11.66□□□□□ -0.54
GARNL3-211ENST00000460176 MFSD14CQ5VZR4 134 aa11.66□□□□□ -0.54
GARNL3-211ENST00000460176 TAPT1Q6NXT6 567 aa11.66□□□□□ -0.54
GARNL3-211ENST00000460176 EEPD1Q7L9B9 569 aa11.66□□□□□ -0.54
GARNL3-211ENST00000460176 BRAPQ7Z569 592 aa11.66□□□□□ -0.54
GARNL3-211ENST00000460176 NEK8Q86SG6 692 aa11.66□□□□□ -0.54
GARNL3-211ENST00000460176 FBXO16Q8IX29 292 aaPredicted RBP11.66□□□□□ -0.54
GARNL3-211ENST00000460176 TRPV1Q8NER1 839 aa11.66□□□□□ -0.54
GARNL3-211ENST00000460176 SH3TC2Q8TF17 1288 aa11.66□□□□□ -0.54
GARNL3-211ENST00000460176 MBOAT7Q96N66 472 aa11.66□□□□□ -0.54
GARNL3-211ENST00000460176 INPP4AQ96PE3 977 aaPredicted RBP11.66□□□□□ -0.54
GARNL3-211ENST00000460176 ABHD16BQ9H3Z7 469 aa11.66□□□□□ -0.54
GARNL3-211ENST00000460176 VTA1Q9NP79 307 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms