RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 CDC25AP30304 524 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 MTIF2P46199 727 aaKnown RBP6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 LMAN1P49257 510 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 PMS1P54277 932 aaKnown RBP6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 APBA1Q02410 837 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 PDE4DQ08499 809 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 SPA17Q15506 151 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 INF2Q27J81 1249 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 VWA3BQ502W6 1294 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 FAM47AQ5JRC9 791 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 ALS2CLQ60I27 953 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 ANKRD40Q6AI12 368 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 PPP1R18Q6NYC8 613 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 C16orf86Q6ZW13 317 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 SV2BQ7L1I2 683 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 SRLQ86TD4 932 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 DZIP1Q86YF9 867 aaKnown RBP6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 SLF2Q8IX21 1173 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 EIF1ADQ8N9N8 165 aaKnown RBP6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 NOA1Q8NC60 698 aaKnown RBP6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 NLGN2Q8NFZ4 835 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 NEK11Q8NG66 645 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 AFAP1L1Q8TED9 768 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 C7orf43Q8WVR3 580 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 ATRIPQ8WXE1 791 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 CELF1Q92879 486 aaKnown RBP6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 SECISBP2LQ93073 1101 aaKnown RBP6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 RRP36Q96EU6 259 aaKnown RBP6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 CNOT6LQ96LI5 555 aaKnown RBP6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 CCDC42Q96M95 316 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 MMS19Q96T76 1030 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 RHOXF2Q9BQY4 288 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 NOC4LQ9BVI4 516 aaKnown RBP6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 RTFDC1Q9BY42 306 aaPredicted RBP6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 RIOX1Q9H6W3 641 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 ZSWIM4Q9H7M6 989 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 MKNK2Q9HBH9 465 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 LUC7LQ9NQ29 371 aaKnown RBP6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 VPS18Q9P253 973 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 FEZ2Q9UHY8 353 aaPredicted RBP6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 FAM184BQ9ULE4 1060 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 HPCAL4Q9UM19 191 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 SNX12Q9UMY4 172 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 BCS1LQ9Y276 419 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 SIK3Q9Y2K2 1263 aa6.81□□□□□ -1.32
UBQLN4-202ENST00000459954 MYO3BQ8WXR4 1341 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 TRIM49BA6NDI0 452 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 SRRM3A6NNA2 597 aaPredicted RBP6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 BTNL10A8MVZ5 291 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 B4DLN1 442 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 GOLGA8KD6RF30 607 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 RBAK-RBAKDNI3L0D1 243 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 SMIM22K7EJ46 135 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 CES2O00748 559 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 OPA1O60313 960 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 GNA14O95837 355 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 SYF2O95926 243 aaKnown RBP6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 ATP1A1P05023 1023 aaKnown RBP6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 EPB41P11171 864 aaKnown RBP6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 VEGFAP15692 232 aaPredicted RBP6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 GCFC2P16383 781 aaKnown RBP6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 CAPN2P17655 700 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 RASA1P20936 1047 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 ANXA13P27216 316 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 PRDX5P30044 214 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 MARSP56192 900 aaKnown RBP6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 ASIC1P78348 528 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 EHHADHQ08426 723 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 LTBP1Q14766 1721 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 TMEM266Q2M3C6 531 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 HYIQ5T013 277 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 C10orf76Q5T2E6 689 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 EMC10Q5UCC4 262 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 MCTP2Q6DN12 878 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 NCAPH2Q6IBW4 605 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 TYW1BQ6NUM6 668 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 DPY19L2Q6NUT2 758 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 EMBQ6PCB8 327 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 CREG2Q8IUH2 290 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 STAG2Q8N3U4 1231 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 KCTD17Q8N5Z5 321 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 RASSF8Q8NHQ8 419 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 AENQ8WTP8 325 aaKnown RBP6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 CAVIN3Q969G5 261 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 CEP63Q96MT8 703 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 ALS2CR12Q96Q35 445 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 MTMR9Q96QG7 549 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 EYA3Q99504 573 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 TMEM47Q9BQJ4 181 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 CRACR2AQ9BSW2 395 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 GLT8D2Q9H1C3 349 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 TAOK3Q9H2K8 898 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 RASSF4Q9H2L5 321 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 NDST4Q9H3R1 872 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 SH2D4AQ9H788 454 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 FAN1Q9Y2M0 1017 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 HYOU1Q9Y4L1 999 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 UTRNP46939 3433 aa6.8□□□□□ -1.32
UBQLN4-202ENST00000459954 SNED1Q8TER0 1413 aa6.79□□□□□ -1.32
UBQLN4-202ENST00000459954 GPR75-ASB3A0A0A6YYF3 556 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms