RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 CCNT1O60563 726 aaKnown RBP11.71□□□□□ -0.53
USP39-210ENST00000459775 NASPP49321 788 aaPredicted RBP11.71□□□□□ -0.53
USP39-210ENST00000459775 RILPL1Q5EBL4 403 aa11.71□□□□□ -0.53
USP39-210ENST00000459775 UTP14CQ5TAP6 766 aaKnown RBP11.71□□□□□ -0.53
USP39-210ENST00000459775 BICD2Q8TD16 824 aa11.71□□□□□ -0.53
USP39-210ENST00000459775 SYTL5Q8TDW5 730 aaPredicted RBP11.71□□□□□ -0.53
USP39-210ENST00000459775 MICAL1Q8TDZ2 1067 aa11.71□□□□□ -0.53
USP39-210ENST00000459775 A1CFQ9NQ94 594 aaKnown RBP11.71□□□□□ -0.53
USP39-210ENST00000459775 RCOR1Q9UKL0 485 aa11.71□□□□□ -0.53
USP39-210ENST00000459775 MYPNQ86TC9 1320 aa11.71□□□□□ -0.54
USP39-210ENST00000459775 ME1P48163 572 aa11.71□□□□□ -0.54
USP39-210ENST00000459775 CNTN2Q02246 1040 aa11.71□□□□□ -0.54
USP39-210ENST00000459775 PTGDRQ13258 359 aa11.71□□□□□ -0.54
USP39-210ENST00000459775 PABPC4Q13310 644 aaKnown RBP eCLIP11.71□□□□□ -0.541e-7■■■□□ 14.9
USP39-210ENST00000459775 IL17AQ16552 155 aa11.71□□□□□ -0.54
USP39-210ENST00000459775 RNF207Q6ZRF8 634 aa11.71□□□□□ -0.54
USP39-210ENST00000459775 IFNL1Q8IU54 200 aa11.71□□□□□ -0.54
USP39-210ENST00000459775 GPT2Q8TD30 523 aa11.71□□□□□ -0.54
USP39-210ENST00000459775 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.71□□□□□ -0.54
USP39-210ENST00000459775 POLR3EQ9NVU0 708 aa11.71□□□□□ -0.54
USP39-210ENST00000459775 CFAP45Q9UL16 551 aa11.71□□□□□ -0.54
USP39-210ENST00000459775 PCDHA7Q9UN72 937 aa11.71□□□□□ -0.54
USP39-210ENST00000459775 SPDYE3A6NKU9 549 aa11.7□□□□□ -0.54
USP39-210ENST00000459775 PIK3CDO00329 1044 aa11.7□□□□□ -0.54
USP39-210ENST00000459775 ATP2A1O14983 1001 aa11.7□□□□□ -0.54
USP39-210ENST00000459775 SPTLC2O15270 562 aa11.7□□□□□ -0.54
USP39-210ENST00000459775 PGK2P07205 417 aa11.7□□□□□ -0.54
USP39-210ENST00000459775 EIF2AK2P19525 551 aaKnown RBP11.7□□□□□ -0.54
USP39-210ENST00000459775 HSD17B4P51659 736 aa11.7□□□□□ -0.54
USP39-210ENST00000459775 INHBEP58166 350 aa11.7□□□□□ -0.54
USP39-210ENST00000459775 ERVK-9P63128 1117 aa11.7□□□□□ -0.54
USP39-210ENST00000459775 ERVK-24P63145 666 aa11.7□□□□□ -0.54
USP39-210ENST00000459775 SLC39A14Q15043 492 aa11.7□□□□□ -0.54
USP39-210ENST00000459775 NEK8Q86SG6 692 aa11.7□□□□□ -0.54
USP39-210ENST00000459775 SMAP1Q8IYB5 467 aaPredicted RBP11.7□□□□□ -0.54
USP39-210ENST00000459775 MSL3Q8N5Y2 521 aaKnown RBP11.7□□□□□ -0.54
USP39-210ENST00000459775 C4orf32Q8N8J7 132 aa11.7□□□□□ -0.54
USP39-210ENST00000459775 NOL7Q9UMY1 257 aaKnown RBP11.7□□□□□ -0.54
USP39-210ENST00000459775 CENPFP49454 3210 aa11.69□□□□□ -0.54
USP39-210ENST00000459775 MANSC4A6NHS7 340 aaPredicted RBP11.69□□□□□ -0.54
USP39-210ENST00000459775 FAM86B1E9PN63 330 aa11.69□□□□□ -0.54
USP39-210ENST00000459775 FAM86B2P0C5J1 330 aa11.69□□□□□ -0.54
USP39-210ENST00000459775 FDX1P10109 184 aa11.69□□□□□ -0.54
USP39-210ENST00000459775 OAZ1P54368 228 aa11.69□□□□□ -0.54
USP39-210ENST00000459775 ARHGAP4P98171 946 aa11.69□□□□□ -0.54
USP39-210ENST00000459775 USP49Q70CQ1 688 aa11.69□□□□□ -0.54
USP39-210ENST00000459775 POTEDQ86YR6 584 aa11.69□□□□□ -0.54
USP39-210ENST00000459775 RIOX2Q8IUF8 465 aa11.69□□□□□ -0.54
USP39-210ENST00000459775 CACTIN-AS1Q8N1I8 211 aa11.69□□□□□ -0.54
USP39-210ENST00000459775 SCAND2PQ9GZW5 306 aaPredicted RBP11.69□□□□□ -0.54
USP39-210ENST00000459775 ACAD9Q9H845 621 aa11.69□□□□□ -0.54
USP39-210ENST00000459775 GEMIN8Q9NWZ8 242 aaKnown RBP11.69□□□□□ -0.54
USP39-210ENST00000459775 CYP39A1Q9NYL5 469 aa11.69□□□□□ -0.54
USP39-210ENST00000459775 RABGAP1Q9Y3P9 1069 aa11.69□□□□□ -0.54
USP39-210ENST00000459775 ASTN1O14525 1302 aa11.69□□□□□ -0.54
USP39-210ENST00000459775 TBC1D8O95759 1140 aa11.69□□□□□ -0.54
USP39-210ENST00000459775 CDC25AP30304 524 aa11.69□□□□□ -0.54
USP39-210ENST00000459775 MTA1Q13330 715 aa11.69□□□□□ -0.54
USP39-210ENST00000459775 TAF1CQ15572 869 aaPredicted RBP11.69□□□□□ -0.54
USP39-210ENST00000459775 ANKRD35Q8N283 1001 aa11.69□□□□□ -0.54
USP39-210ENST00000459775 MB21D1Q8N884 522 aa11.69□□□□□ -0.54
USP39-210ENST00000459775 RETREG2Q8NC44 543 aa11.69□□□□□ -0.54
USP39-210ENST00000459775 CRYGNQ8WXF5 182 aa11.69□□□□□ -0.54
USP39-210ENST00000459775 PNMA3Q9UL41 463 aa11.69□□□□□ -0.54
USP39-210ENST00000459775 SLC20A2Q08357 652 aa11.68□□□□□ -0.54
USP39-210ENST00000459775 CRHR2Q13324 411 aa11.68□□□□□ -0.54
USP39-210ENST00000459775 GPRC5AQ8NFJ5 357 aa11.68□□□□□ -0.54
USP39-210ENST00000459775 GOLPH3LQ9H4A5 285 aa11.68□□□□□ -0.54
USP39-210ENST00000459775 FBXO2Q9UK22 296 aaPredicted RBP11.68□□□□□ -0.54
USP39-210ENST00000459775 GOLGA6L22H0YM25 854 aa11.68□□□□□ -0.54
USP39-210ENST00000459775 YEATS4O95619 227 aa11.68□□□□□ -0.54
USP39-210ENST00000459775 MYCLP12524 364 aaPredicted RBP11.68□□□□□ -0.54
USP39-210ENST00000459775 LIG1P18858 919 aa11.68□□□□□ -0.54
USP39-210ENST00000459775 SREBF1P36956 1147 aa11.68□□□□□ -0.54
USP39-210ENST00000459775 VASPP50552 380 aaPredicted RBP11.68□□□□□ -0.54
USP39-210ENST00000459775 PRR16Q569H4 304 aa11.68□□□□□ -0.54
USP39-210ENST00000459775 MCF2L2Q86YR7 1114 aa11.68□□□□□ -0.54
USP39-210ENST00000459775 TMEM87AQ8NBN3 555 aa11.68□□□□□ -0.54
USP39-210ENST00000459775 CXorf38Q8TB03 319 aa11.68□□□□□ -0.54
USP39-210ENST00000459775 RMDN3Q96TC7 470 aa11.68□□□□□ -0.54
USP39-210ENST00000459775 PARK7Q99497 189 aaKnown RBP11.68□□□□□ -0.54
USP39-210ENST00000459775 PANK2Q9BZ23 570 aa11.68□□□□□ -0.54
USP39-210ENST00000459775 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.67□□□□□ -0.54
USP39-210ENST00000459775 A0A1B0GVL5 298 aa11.67□□□□□ -0.54
USP39-210ENST00000459775 VWA3AA6NCI4 1184 aa11.67□□□□□ -0.54
USP39-210ENST00000459775 PP2D1A8MPX8 630 aa11.67□□□□□ -0.54
USP39-210ENST00000459775 MRPS9P82933 396 aaKnown RBP11.67□□□□□ -0.54
USP39-210ENST00000459775 TRAF1Q13077 416 aa11.67□□□□□ -0.54
USP39-210ENST00000459775 AP3B2Q13367 1082 aa11.67□□□□□ -0.54
USP39-210ENST00000459775 MAPK8IP2Q13387 824 aaPredicted RBP11.67□□□□□ -0.54
USP39-210ENST00000459775 MORC4Q8TE76 937 aa11.67□□□□□ -0.54
USP39-210ENST00000459775 ERO1AQ96HE7 468 aa11.67□□□□□ -0.54
USP39-210ENST00000459775 PKD2L1Q9P0L9 805 aa11.67□□□□□ -0.54
USP39-210ENST00000459775 SLC45A1Q9Y2W3 748 aa11.67□□□□□ -0.54
USP39-210ENST00000459775 A0A0G2JMZ2 1700 aa11.67□□□□□ -0.54
USP39-210ENST00000459775 GOLGA6CA6NDK9 693 aa11.66□□□□□ -0.54
USP39-210ENST00000459775 GOLGA6BA6NDN3 693 aa11.66□□□□□ -0.54
USP39-210ENST00000459775 DDX11L8A8MPP1 907 aa11.66□□□□□ -0.54
USP39-210ENST00000459775 VGLL3A8MV65 326 aa11.66□□□□□ -0.54
USP39-210ENST00000459775 TRAK2O60296 914 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms