RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 RHBDL3P58872 404 aa15.7■□□□□ 0.1
SCFD1-203ENST00000458591 KCNMA1Q12791 1236 aa15.7■□□□□ 0.1
SCFD1-203ENST00000458591 TTBK2Q6IQ55 1244 aa15.7■□□□□ 0.1
SCFD1-203ENST00000458591 ZNF662Q6ZS27 426 aa15.7■□□□□ 0.1
SCFD1-203ENST00000458591 SND1Q7KZF4 910 aaKnown RBP eCLIP15.7■□□□□ 0.1
SCFD1-203ENST00000458591 SRLQ86TD4 932 aa15.7■□□□□ 0.1
SCFD1-203ENST00000458591 DNAAF5Q86Y56 855 aa15.7■□□□□ 0.1
SCFD1-203ENST00000458591 SNX29Q8TEQ0 813 aa15.7■□□□□ 0.1
SCFD1-203ENST00000458591 BAP1Q92560 729 aa15.7■□□□□ 0.1
SCFD1-203ENST00000458591 MTMR8Q96EF0 704 aa15.7■□□□□ 0.1
SCFD1-203ENST00000458591 CRACR2AQ9BSW2 395 aa15.7■□□□□ 0.1
SCFD1-203ENST00000458591 CD209Q9NNX6 404 aa15.7■□□□□ 0.1
SCFD1-203ENST00000458591 F8W031 263 aaPredicted RBP15.7■□□□□ 0.1
SCFD1-203ENST00000458591 SSBP05455 408 aaKnown RBP eCLIP15.7■□□□□ 0.1
SCFD1-203ENST00000458591 SLC16A2P36021 539 aa15.7■□□□□ 0.1
SCFD1-203ENST00000458591 SLC1A4P43007 532 aa15.7■□□□□ 0.1
SCFD1-203ENST00000458591 AMPD3Q01432 767 aa15.7■□□□□ 0.1
SCFD1-203ENST00000458591 CKAP4Q07065 602 aaKnown RBP15.7■□□□□ 0.1
SCFD1-203ENST00000458591 GRAPQ13588 217 aa15.7■□□□□ 0.1
SCFD1-203ENST00000458591 TTC19Q6DKK2 380 aaPredicted RBP15.7■□□□□ 0.1
SCFD1-203ENST00000458591 LRRC55Q6ZSA7 311 aa15.7■□□□□ 0.1
SCFD1-203ENST00000458591 GRAPLQ8TC17 118 aaPredicted RBP15.7■□□□□ 0.1
SCFD1-203ENST00000458591 POLD4Q9HCU8 107 aa15.7■□□□□ 0.1
SCFD1-203ENST00000458591 COL5A3P25940 1745 aaPredicted RBP15.69■□□□□ 0.1
SCFD1-203ENST00000458591 A0A1W2PQJ5 194 aa15.69■□□□□ 0.1
SCFD1-203ENST00000458591 PPP1R11O60927 126 aaPredicted RBP15.69■□□□□ 0.1
SCFD1-203ENST00000458591 UFL1O94874 794 aa15.69■□□□□ 0.1
SCFD1-203ENST00000458591 PDHBP11177 359 aa15.69■□□□□ 0.1
SCFD1-203ENST00000458591 AARSP49588 968 aaKnown RBP eCLIP15.69■□□□□ 0.1
SCFD1-203ENST00000458591 GSTO1P78417 241 aa15.69■□□□□ 0.1
SCFD1-203ENST00000458591 UNC13DQ70J99 1090 aa15.69■□□□□ 0.1
SCFD1-203ENST00000458591 NELFCDQ8IXH7 590 aa15.69■□□□□ 0.1
SCFD1-203ENST00000458591 EHBP1Q8NDI1 1231 aa15.69■□□□□ 0.1
SCFD1-203ENST00000458591 SPATA4Q8NEY3 305 aa15.69■□□□□ 0.1
SCFD1-203ENST00000458591 AFAP1L1Q8TED9 768 aa15.69■□□□□ 0.1
SCFD1-203ENST00000458591 CDK5RAP3Q96JB5 506 aa15.69■□□□□ 0.1
SCFD1-203ENST00000458591 OSBPL9Q96SU4 736 aa15.69■□□□□ 0.1
SCFD1-203ENST00000458591 MED4Q9NPJ6 270 aa15.69■□□□□ 0.1
SCFD1-203ENST00000458591 RTCBQ9Y3I0 505 aaKnown RBP15.69■□□□□ 0.1
SCFD1-203ENST00000458591 AKR1B1P15121 316 aa15.69■□□□□ 0.1
SCFD1-203ENST00000458591 MAGEA1P43355 309 aa15.69■□□□□ 0.1
SCFD1-203ENST00000458591 RNASE9P60153 205 aaKnown RBP15.69■□□□□ 0.1
SCFD1-203ENST00000458591 BARGINQ6ZT62 677 aa15.69■□□□□ 0.1
SCFD1-203ENST00000458591 ZNF804AQ7Z570 1209 aa15.69■□□□□ 0.1
SCFD1-203ENST00000458591 RAD54LQ92698 747 aa15.69■□□□□ 0.1
SCFD1-203ENST00000458591 LZTS2Q9BRK4 669 aa15.69■□□□□ 0.1
SCFD1-203ENST00000458591 CCNL1Q9UK58 526 aaPredicted RBP15.69■□□□□ 0.1
SCFD1-203ENST00000458591 TNRC6CQ9HCJ0 1690 aaKnown RBP15.68■□□□□ 0.1
SCFD1-203ENST00000458591 ANO9A1A5B4 782 aa15.68■□□□□ 0.1
SCFD1-203ENST00000458591 TARSL2A2RTX5 802 aaKnown RBP15.68■□□□□ 0.1
SCFD1-203ENST00000458591 ZSCAN5CA6NGD5 496 aaPredicted RBP15.68■□□□□ 0.1
SCFD1-203ENST00000458591 TACC1O75410 805 aa15.68■□□□□ 0.1
SCFD1-203ENST00000458591 MCM3P25205 808 aa15.68■□□□□ 0.1
SCFD1-203ENST00000458591 ARID5AQ03989 594 aa15.68■□□□□ 0.1
SCFD1-203ENST00000458591 MAN2A1Q16706 1144 aa15.68■□□□□ 0.1
SCFD1-203ENST00000458591 FIGNQ5HY92 759 aa15.68■□□□□ 0.1
SCFD1-203ENST00000458591 TSEN2Q8NCE0 465 aaKnown RBP15.68■□□□□ 0.1
SCFD1-203ENST00000458591 MAGEF1Q9HAY2 307 aa15.68■□□□□ 0.1
SCFD1-203ENST00000458591 PACSIN2Q9UNF0 486 aaPredicted RBP15.68■□□□□ 0.1
SCFD1-203ENST00000458591 JRKLQ9Y4A0 524 aa15.68■□□□□ 0.1
SCFD1-203ENST00000458591 GPR75-ASB3A0A0A6YYF3 556 aa15.68■□□□□ 0.1
SCFD1-203ENST00000458591 TLR2O60603 784 aa15.68■□□□□ 0.1
SCFD1-203ENST00000458591 NAP1L1P55209 391 aaKnown RBP15.68■□□□□ 0.1
SCFD1-203ENST00000458591 MFSD14BQ5SR56 506 aa15.68■□□□□ 0.1
SCFD1-203ENST00000458591 MXD3Q9BW11 206 aa15.68■□□□□ 0.1
SCFD1-203ENST00000458591 RIOX1Q9H6W3 641 aa15.68■□□□□ 0.1
SCFD1-203ENST00000458591 VIPAS39Q9H9C1 493 aa15.68■□□□□ 0.1
SCFD1-203ENST00000458591 LEMD3Q9Y2U8 911 aa15.68■□□□□ 0.1
SCFD1-203ENST00000458591 CCDC88AQ3V6T2 1871 aa15.67■□□□□ 0.1
SCFD1-203ENST00000458591 E9PMD0 336 aa15.67■□□□□ 0.1
SCFD1-203ENST00000458591 USO1O60763 962 aaKnown RBP15.67■□□□□ 0.1
SCFD1-203ENST00000458591 LDHCP07864 332 aa15.67■□□□□ 0.1
SCFD1-203ENST00000458591 HNRNPH3P31942 346 aaKnown RBP15.67■□□□□ 0.1
SCFD1-203ENST00000458591 CDK17Q00537 523 aa15.67■□□□□ 0.1
SCFD1-203ENST00000458591 PTPROQ16827 1216 aa15.67■□□□□ 0.1
SCFD1-203ENST00000458591 DNAJC21Q5F1R6 531 aaKnown RBP15.67■□□□□ 0.1
SCFD1-203ENST00000458591 HGSNATQ68CP4 663 aa15.67■□□□□ 0.1
SCFD1-203ENST00000458591 DPP8Q6V1X1 898 aaPredicted RBP15.67■□□□□ 0.1
SCFD1-203ENST00000458591 GOLGA6L1Q8N7Z2 621 aa15.67■□□□□ 0.1
SCFD1-203ENST00000458591 TRIM58Q8NG06 486 aa15.67■□□□□ 0.1
SCFD1-203ENST00000458591 AENQ8WTP8 325 aaKnown RBP15.67■□□□□ 0.1
SCFD1-203ENST00000458591 TLR10Q9BXR5 811 aa15.67■□□□□ 0.1
SCFD1-203ENST00000458591 RBM12Q9NTZ6 932 aaKnown RBP15.67■□□□□ 0.1
SCFD1-203ENST00000458591 DDX60LQ5H9U9 1706 aaKnown RBP15.67■□□□□ 0.1
SCFD1-203ENST00000458591 ESYT3A0FGR9 886 aa15.67■□□□□ 0.1
SCFD1-203ENST00000458591 FAM170AA1A519 330 aa15.67■□□□□ 0.1
SCFD1-203ENST00000458591 RPS6KA5O75582 802 aa15.67■□□□□ 0.1
SCFD1-203ENST00000458591 NOL4O94818 638 aa15.67■□□□□ 0.1
SCFD1-203ENST00000458591 ADCY7P51828 1080 aa15.67■□□□□ 0.1
SCFD1-203ENST00000458591 MAP9Q49MG5 647 aa15.67■□□□□ 0.1
SCFD1-203ENST00000458591 TDRD12Q587J7 1177 aaKnown RBP15.67■□□□□ 0.1
SCFD1-203ENST00000458591 PDXDC1Q6P996 788 aa15.67■□□□□ 0.1
SCFD1-203ENST00000458591 CACNA2D4Q7Z3S7 1137 aa15.67■□□□□ 0.1
SCFD1-203ENST00000458591 HAS1Q92839 578 aa15.67■□□□□ 0.1
SCFD1-203ENST00000458591 TRAF5O00463 557 aa15.66■□□□□ 0.1
SCFD1-203ENST00000458591 PPARDQ03181 441 aa15.66■□□□□ 0.1
SCFD1-203ENST00000458591 TRADDQ15628 312 aa15.66■□□□□ 0.1
SCFD1-203ENST00000458591 SHROOM1Q2M3G4 852 aaPredicted RBP15.66■□□□□ 0.1
SCFD1-203ENST00000458591 ASTE1Q2TB18 679 aaPredicted RBP15.66■□□□□ 0.1
SCFD1-203ENST00000458591 KLHDC7AQ5VTJ3 777 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms