RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 PURBQ96QR8 312 aaKnown RBP19.42■□□□□ 0.7
SF3B4-202ENST00000457312 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.42■□□□□ 0.7
SF3B4-202ENST00000457312 ANTXR1Q9H6X2 564 aa19.42■□□□□ 0.7
SF3B4-202ENST00000457312 F5H6K3 240 aa19.41■□□□□ 0.7
SF3B4-202ENST00000457312 BMPR1AP36894 532 aa19.41■□□□□ 0.7
SF3B4-202ENST00000457312 KLRC3Q07444 240 aa19.41■□□□□ 0.7
SF3B4-202ENST00000457312 CYP39A1Q9NYL5 469 aa19.41■□□□□ 0.7
SF3B4-202ENST00000457312 UPP2O95045 317 aa19.4■□□□□ 0.7
SF3B4-202ENST00000457312 BRD1O95696 1058 aa19.4■□□□□ 0.7
SF3B4-202ENST00000457312 ANGPT1Q15389 498 aa19.4■□□□□ 0.7
SF3B4-202ENST00000457312 C16orf86Q6ZW13 317 aa19.4■□□□□ 0.7
SF3B4-202ENST00000457312 UBALD2Q8IYN6 164 aa19.4■□□□□ 0.7
SF3B4-202ENST00000457312 COPS5Q92905 334 aa19.4■□□□□ 0.7
SF3B4-202ENST00000457312 SEMA4AQ9H3S1 761 aa19.4■□□□□ 0.7
SF3B4-202ENST00000457312 GPR108Q9NPR9 543 aa19.4■□□□□ 0.7
SF3B4-202ENST00000457312 CYP2D7A0A087X1C5 515 aa19.39■□□□□ 0.69
SF3B4-202ENST00000457312 CLCN5P51795 746 aa19.39■□□□□ 0.69
SF3B4-202ENST00000457312 MTMR3Q13615 1198 aa19.39■□□□□ 0.69
SF3B4-202ENST00000457312 PPP2R5BQ15173 497 aa19.39■□□□□ 0.69
SF3B4-202ENST00000457312 CWF19L1Q69YN2 538 aaKnown RBP19.39■□□□□ 0.69
SF3B4-202ENST00000457312 FIBCD1Q8N539 461 aa19.39■□□□□ 0.69
SF3B4-202ENST00000457312 PPP2R3CQ969Q6 453 aa19.39■□□□□ 0.69
SF3B4-202ENST00000457312 GTF2IRD1Q9UHL9 959 aa19.39■□□□□ 0.69
SF3B4-202ENST00000457312 FEM1BQ9UK73 627 aa19.39■□□□□ 0.69
SF3B4-202ENST00000457312 EMSYQ7Z589 1322 aa19.39■□□□□ 0.69
SF3B4-202ENST00000457312 NKRFO15226 690 aaKnown RBP eCLIP19.38■□□□□ 0.69
SF3B4-202ENST00000457312 ARP10275 920 aa19.38■□□□□ 0.69
SF3B4-202ENST00000457312 G3BP1Q13283 466 aaKnown RBP eCLIP19.38■□□□□ 0.69
SF3B4-202ENST00000457312 CCDC184Q52MB2 194 aa19.38■□□□□ 0.69
SF3B4-202ENST00000457312 PLEKHG4Q58EX7 1191 aa19.38■□□□□ 0.69
SF3B4-202ENST00000457312 CCDC105Q8IYK2 499 aa19.38■□□□□ 0.69
SF3B4-202ENST00000457312 LCORLQ8N3X6 602 aa19.38■□□□□ 0.69
SF3B4-202ENST00000457312 HINFPQ9BQA5 517 aa19.38■□□□□ 0.69
SF3B4-202ENST00000457312 IFIH1Q9BYX4 1025 aaKnown RBP19.38■□□□□ 0.69
SF3B4-202ENST00000457312 SMOC2Q9H3U7 446 aa19.38■□□□□ 0.69
SF3B4-202ENST00000457312 TLR7Q9NYK1 1049 aaKnown RBP19.38■□□□□ 0.69
SF3B4-202ENST00000457312 DBNLQ9UJU6 430 aaKnown RBP19.38■□□□□ 0.69
SF3B4-202ENST00000457312 RWDD3Q9Y3V2 267 aa19.38■□□□□ 0.69
SF3B4-202ENST00000457312 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.37■□□□□ 0.69
SF3B4-202ENST00000457312 PTK7Q13308 1070 aa19.37■□□□□ 0.69
SF3B4-202ENST00000457312 TKFCQ3LXA3 575 aa19.37■□□□□ 0.69
SF3B4-202ENST00000457312 MUM1L1Q5H9M0 696 aa19.37■□□□□ 0.69
SF3B4-202ENST00000457312 CYP2W1Q8TAV3 490 aa19.37■□□□□ 0.69
SF3B4-202ENST00000457312 KAT2BQ92831 832 aa19.37■□□□□ 0.69
SF3B4-202ENST00000457312 TRERF1Q96PN7 1200 aa19.37■□□□□ 0.69
SF3B4-202ENST00000457312 HAUS7Q99871 368 aa19.37■□□□□ 0.69
SF3B4-202ENST00000457312 SORCS3Q9UPU3 1222 aa19.37■□□□□ 0.69
SF3B4-202ENST00000457312 SP100P23497 879 aaPredicted RBP19.36■□□□□ 0.69
SF3B4-202ENST00000457312 DNAJB1P25685 340 aa19.36■□□□□ 0.69
SF3B4-202ENST00000457312 NRIP1P48552 1158 aa19.36■□□□□ 0.69
SF3B4-202ENST00000457312 ALDH5A1P51649 535 aaPredicted RBP19.36■□□□□ 0.69
SF3B4-202ENST00000457312 LRRC47Q8N1G4 583 aaKnown RBP19.36■□□□□ 0.69
SF3B4-202ENST00000457312 DCLK2Q8N568 766 aa19.36■□□□□ 0.69
SF3B4-202ENST00000457312 CLP1Q92989 425 aaKnown RBP19.36■□□□□ 0.69
SF3B4-202ENST00000457312 PLXNA4Q9HCM2 1894 aa19.36■□□□□ 0.69
SF3B4-202ENST00000457312 ADGRA3Q8IWK6 1321 aa19.35■□□□□ 0.69
SF3B4-202ENST00000457312 ALAS1P13196 640 aa19.35■□□□□ 0.69
SF3B4-202ENST00000457312 C12orf60Q5U649 245 aa19.35■□□□□ 0.69
SF3B4-202ENST00000457312 IL17RAQ96F46 866 aa19.35■□□□□ 0.69
SF3B4-202ENST00000457312 MFSD1Q9H3U5 465 aa19.35■□□□□ 0.69
SF3B4-202ENST00000457312 RC3H2Q9HBD1 1191 aaKnown RBP19.35■□□□□ 0.69
SF3B4-202ENST00000457312 NYAP2Q9P242 653 aa19.35■□□□□ 0.69
SF3B4-202ENST00000457312 HDAC6Q9UBN7 1215 aa19.35■□□□□ 0.69
SF3B4-202ENST00000457312 ASPMQ8IZT6 3477 aa19.35■□□□□ 0.69
SF3B4-202ENST00000457312 PDE6AP16499 860 aa19.34■□□□□ 0.69
SF3B4-202ENST00000457312 KIAA0319Q5VV43 1072 aa19.34■□□□□ 0.69
SF3B4-202ENST00000457312 RUBCNQ92622 972 aa19.34■□□□□ 0.69
SF3B4-202ENST00000457312 PLAGL2Q9UPG8 496 aa19.34■□□□□ 0.69
SF3B4-202ENST00000457312 R4GN57 208 aa19.34■□□□□ 0.69
SF3B4-202ENST00000457312 PNMA6EA0A0J9YXQ4 647 aa19.33■□□□□ 0.68
SF3B4-202ENST00000457312 PRKAB2O43741 272 aa19.33■□□□□ 0.68
SF3B4-202ENST00000457312 MMP3P08254 477 aa19.33■□□□□ 0.68
SF3B4-202ENST00000457312 ADRB1P08588 477 aa19.33■□□□□ 0.68
SF3B4-202ENST00000457312 FDX1P10109 184 aa19.33■□□□□ 0.68
SF3B4-202ENST00000457312 ATXN1P54253 815 aaKnown RBP19.33■□□□□ 0.68
SF3B4-202ENST00000457312 RBM10P98175 930 aaKnown RBP19.33■□□□□ 0.68
SF3B4-202ENST00000457312 NSMFQ6X4W1 530 aa19.33■□□□□ 0.68
SF3B4-202ENST00000457312 MYH7BA7E2Y1 1941 aa19.32■□□□□ 0.68
SF3B4-202ENST00000457312 PI15O43692 258 aa19.32■□□□□ 0.68
SF3B4-202ENST00000457312 AOC1P19801 751 aa19.32■□□□□ 0.68
SF3B4-202ENST00000457312 RBM23Q86U06 439 aaKnown RBP19.32■□□□□ 0.68
SF3B4-202ENST00000457312 VN1R2Q8NFZ6 395 aa19.32■□□□□ 0.68
SF3B4-202ENST00000457312 SCFD2Q8WU76 684 aa19.32■□□□□ 0.68
SF3B4-202ENST00000457312 CHAMP1Q96JM3 812 aa19.32■□□□□ 0.68
SF3B4-202ENST00000457312 PLVAPQ9BX97 442 aa19.32■□□□□ 0.68
SF3B4-202ENST00000457312 LOC102724159A0A0B4J2E5 919 aa19.31■□□□□ 0.68
SF3B4-202ENST00000457312 ARIH2O95376 493 aa19.31■□□□□ 0.68
SF3B4-202ENST00000457312 PWP2Q15269 919 aaKnown RBP19.31■□□□□ 0.68
SF3B4-202ENST00000457312 RPAP2Q8IXW5 612 aaPredicted RBP19.31■□□□□ 0.68
SF3B4-202ENST00000457312 DTWD2Q8NBA8 298 aa19.31■□□□□ 0.68
SF3B4-202ENST00000457312 FLCNQ8NFG4 579 aa19.31■□□□□ 0.68
SF3B4-202ENST00000457312 AFG1LQ8WV93 481 aa19.31■□□□□ 0.68
SF3B4-202ENST00000457312 SEPT8Q92599 483 aa19.31■□□□□ 0.68
SF3B4-202ENST00000457312 OSBPL7Q9BZF2 842 aa19.31■□□□□ 0.68
SF3B4-202ENST00000457312 ARMT1Q9H993 441 aa19.31■□□□□ 0.68
SF3B4-202ENST00000457312 ADD3Q9UEY8 706 aaKnown RBP19.31■□□□□ 0.68
SF3B4-202ENST00000457312 FLNBO75369 2602 aaKnown RBP19.31■□□□□ 0.68
SF3B4-202ENST00000457312 TTC3P53804 2025 aa19.3■□□□□ 0.68
SF3B4-202ENST00000457312 ZNF532Q9HCE3 1301 aa19.3■□□□□ 0.68
SF3B4-202ENST00000457312 RSPH10B2B2RC85 870 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms