RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 NMT2O60551 498 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 AFPP02771 609 aaKnown RBP5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 GFPT1Q06210 699 aaPredicted RBP5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 PPP1R7Q15435 360 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 ANKRD40Q6AI12 368 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 RCSD1Q6JBY9 416 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 RNF111Q6ZNA4 994 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 LONP2Q86WA8 852 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 ATP8B4Q8TF62 1192 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 FAM136AQ96C01 138 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 SLC7A6OSQ96CW6 309 aaPredicted RBP5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 PBKQ96KB5 322 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 NHEJ1Q9H9Q4 299 aaPredicted RBP5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 ERVK-5Q9HDB9 667 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 SLC12A4Q9UP95 1085 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 SIK3Q9Y2K2 1263 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 AKAP12Q02952 1782 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 CPDO75976 1380 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 TARSL2A2RTX5 802 aaKnown RBP5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 DAPK3O43293 454 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 RARAP10276 462 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 IFNAR2P48551 515 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 MAGOHP61326 146 aaKnown RBP5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 TTF1Q15361 905 aaPredicted RBP5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 FAM47EQ6ZV65 393 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 ASRGL1Q7L266 308 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 TRIM74Q86UV6 250 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 TRIM73Q86UV7 250 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 ADSSL1Q8N142 457 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 CAVIN3Q969G5 261 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 MAGOHBQ96A72 148 aaKnown RBP5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 PRR11Q96HE9 360 aaPredicted RBP5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 PWWP2AQ96N64 755 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 FAM207AQ9NSI2 230 aaPredicted RBP5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 CAPN11Q9UMQ6 739 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 CTNND2Q9UQB3 1225 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 PLEKHG1Q9ULL1 1385 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 ENTPD5O75356 428 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 RTN3O95197 1032 aaPredicted RBP5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 IFNAR1P17181 557 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 VAV2P52735 878 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 TROAPQ12815 778 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 ZNF174Q15697 407 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 ERMARDQ5T6L9 678 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 ISLR2Q6UXK2 745 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 DSTYKQ6XUX3 929 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 KCNK18Q7Z418 384 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 KIAA0895Q8NCT3 520 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 HELBQ8NG08 1087 aaPredicted RBP5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 CCDC114Q96M63 670 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 NUP88Q99567 741 aaPredicted RBP5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 HERPUD2Q9BSE4 406 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 CHORDC1Q9UHD1 332 aaPredicted RBP5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 GMNCA6NCL1 334 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 ERLIN1O75477 346 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 HAP1P54257 671 aaPredicted RBP5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 PIP4K2BP78356 416 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 PLOD1Q02809 727 aaPredicted RBP5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 ZNF530Q6P9A1 599 aaPredicted RBP5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 PIGWQ7Z7B1 504 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 LRRC34Q8IZ02 419 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 NRG4Q8WWG1 115 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 CUL5Q93034 780 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 PREBQ9HCU5 417 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 SLCO1B3Q9NPD5 702 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 NOVA2Q9UNW9 492 aaKnown RBP5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 PLAAQ9Y263 795 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 GOLGA6L9A6NEM1 432 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 KCNJ18B7U540 433 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 EVI5O60447 810 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 KCNJ12Q14500 433 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 LRRC14Q15048 493 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 LACTB2Q53H82 288 aaPredicted RBP5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 SGMS1Q86VZ5 419 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 CYP4X1Q8N118 509 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 MB21D1Q8N884 522 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 DRAXINQ8NBI3 349 aaPredicted RBP5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 FBXO25Q8TCJ0 367 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 ATP6V1G3Q96LB4 118 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 MMTAG2Q9BU76 263 aaKnown RBP5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 SEMA4AQ9H3S1 761 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 SH2D4AQ9H788 454 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 NLRC4Q9NPP4 1024 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 ADAMTS1Q9UHI8 967 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 TTF2Q9UNY4 1162 aaKnown RBP5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 ZNF232Q9UNY5 417 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 RIPOR2Q9Y4F9 1068 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 TCRBV7S2A1N4TA0A589 114 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 RNF8O76064 485 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 EIF4A3P38919 411 aaKnown RBP5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 CCNFP41002 786 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 ZBED6P86452 979 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 FAM133BQ5BKY9 247 aaKnown RBP5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 ANKRD13DQ6ZTN6 518 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 KRT12Q99456 494 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 AP1M1Q9BXS5 423 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 SEMA6BQ9H3T3 888 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 TUT1Q9H6E5 874 aaKnown RBP5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 GDF3Q9NR23 364 aa5.02□□□□□ -1.61
DEPDC1-202ENST00000456315 DIP2AQ14689 1571 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms