RNA–Protein interactions for RNA: ENST00000456019.1

COL13A1-206, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-206ENST00000456019 MRVI1Q9Y6F6 885 aa20.47■□□□□ 0.87
COL13A1-206ENST00000456019 PLEKHA8P1O95397 391 aa20.46■□□□□ 0.87
COL13A1-206ENST00000456019 SUPT20HL2P0C7V6 817 aa20.46■□□□□ 0.87
COL13A1-206ENST00000456019 RXRAP19793 462 aa20.46■□□□□ 0.87
COL13A1-206ENST00000456019 CCND2P30279 289 aa20.46■□□□□ 0.87
COL13A1-206ENST00000456019 CYP2C18P33260 490 aa20.46■□□□□ 0.87
COL13A1-206ENST00000456019 KRT32Q14532 448 aa20.46■□□□□ 0.87
COL13A1-206ENST00000456019 FAM109BQ6ICB4 259 aaPredicted RBP20.46■□□□□ 0.87
COL13A1-206ENST00000456019 KCNV1Q6PIU1 500 aa20.46■□□□□ 0.87
COL13A1-206ENST00000456019 SYNE3Q6ZMZ3 975 aa20.46■□□□□ 0.87
COL13A1-206ENST00000456019 Q7L0L9 218 aa20.46■□□□□ 0.87
COL13A1-206ENST00000456019 SRBD1Q8N5C6 995 aaKnown RBP20.46■□□□□ 0.87
COL13A1-206ENST00000456019 AFG1LQ8WV93 481 aa20.46■□□□□ 0.87
COL13A1-206ENST00000456019 MMP3P08254 477 aa20.45■□□□□ 0.86
COL13A1-206ENST00000456019 CSF2RAP15509 400 aa20.45■□□□□ 0.86
COL13A1-206ENST00000456019 SMAD3P84022 425 aaKnown RBP20.45■□□□□ 0.86
COL13A1-206ENST00000456019 NBPF20Q3BBV1 942 aa20.45■□□□□ 0.86
COL13A1-206ENST00000456019 NFRKBQ6P4R8 1299 aa20.45■□□□□ 0.86
COL13A1-206ENST00000456019 DHX32Q7L7V1 743 aaKnown RBP20.45■□□□□ 0.86
COL13A1-206ENST00000456019 RASEFQ8IZ41 740 aa20.45■□□□□ 0.86
COL13A1-206ENST00000456019 FANCBQ8NB91 859 aa20.45■□□□□ 0.86
COL13A1-206ENST00000456019 EMID1Q96A84 441 aaPredicted RBP20.45■□□□□ 0.86
COL13A1-206ENST00000456019 NOC4LQ9BVI4 516 aaKnown RBP20.45■□□□□ 0.86
COL13A1-206ENST00000456019 KIAA1217Q5T5P2 1943 aa20.45■□□□□ 0.86
COL13A1-206ENST00000456019 BAZ2BQ9UIF8 2168 aaKnown RBP20.44■□□□□ 0.86
COL13A1-206ENST00000456019 CENPBP07199 599 aaPredicted RBP20.44■□□□□ 0.86
COL13A1-206ENST00000456019 EXOSC10Q01780 885 aaKnown RBP20.44■□□□□ 0.86
COL13A1-206ENST00000456019 PTPN11Q06124 597 aaPredicted RBP20.44■□□□□ 0.86
COL13A1-206ENST00000456019 LAMC2Q13753 1193 aa20.44■□□□□ 0.86
COL13A1-206ENST00000456019 FAM47CQ5HY64 1035 aa20.44■□□□□ 0.86
COL13A1-206ENST00000456019 MICU3Q86XE3 530 aa20.44■□□□□ 0.86
COL13A1-206ENST00000456019 RAB11FIP4Q86YS3 637 aa20.44■□□□□ 0.86
COL13A1-206ENST00000456019 IL31RAQ8NI17 732 aa20.44■□□□□ 0.86
COL13A1-206ENST00000456019 CUL5Q93034 780 aa20.44■□□□□ 0.86
COL13A1-206ENST00000456019 MTMR10Q9NXD2 777 aa20.44■□□□□ 0.86
COL13A1-206ENST00000456019 RGS20O76081 388 aa20.43■□□□□ 0.86
COL13A1-206ENST00000456019 HMGB1P09429 215 aaKnown RBP20.43■□□□□ 0.86
COL13A1-206ENST00000456019 CASTP20810 708 aaKnown RBP20.43■□□□□ 0.86
COL13A1-206ENST00000456019 DGKDQ16760 1214 aa20.43■□□□□ 0.86
COL13A1-206ENST00000456019 ADCK5Q3MIX3 580 aa20.43■□□□□ 0.86
COL13A1-206ENST00000456019 PSRC1Q6PGN9 363 aaPredicted RBP20.43■□□□□ 0.86
COL13A1-206ENST00000456019 TMTC3Q6ZXV5 915 aa20.43■□□□□ 0.86
COL13A1-206ENST00000456019 DHX37Q8IY37 1157 aaKnown RBP20.43■□□□□ 0.86
COL13A1-206ENST00000456019 CMTR1Q8N1G2 835 aaKnown RBP20.43■□□□□ 0.86
COL13A1-206ENST00000456019 SMARCC2Q8TAQ2 1214 aa20.43■□□□□ 0.86
COL13A1-206ENST00000456019 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.43■□□□□ 0.86
COL13A1-206ENST00000456019 TRMT13Q9NUP7 481 aaKnown RBP20.43■□□□□ 0.86
COL13A1-206ENST00000456019 FRMPD4Q14CM0 1322 aa20.43■□□□□ 0.86
COL13A1-206ENST00000456019 LAMA2P24043 3122 aaKnown RBP20.42■□□□□ 0.86
COL13A1-206ENST00000456019 PIK3CDO00329 1044 aa20.42■□□□□ 0.86
COL13A1-206ENST00000456019 STAM2O75886 525 aa20.42■□□□□ 0.86
COL13A1-206ENST00000456019 TGFB3P10600 412 aa20.42■□□□□ 0.86
COL13A1-206ENST00000456019 TMEM240Q5SV17 173 aa20.42■□□□□ 0.86
COL13A1-206ENST00000456019 ZNF697Q5TEC3 545 aa20.42■□□□□ 0.86
COL13A1-206ENST00000456019 APOA5Q6Q788 366 aa20.42■□□□□ 0.86
COL13A1-206ENST00000456019 C16orf59Q7L2K0 433 aa20.42■□□□□ 0.86
COL13A1-206ENST00000456019 PPTC7Q8NI37 304 aa20.42■□□□□ 0.86
COL13A1-206ENST00000456019 IL23AQ9NPF7 189 aa20.42■□□□□ 0.86
COL13A1-206ENST00000456019 RBM28Q9NW13 759 aaKnown RBP20.42■□□□□ 0.86
COL13A1-206ENST00000456019 SCN10AQ9Y5Y9 1956 aa20.42■□□□□ 0.86
COL13A1-206ENST00000456019 UMODL1Q5DID0 1318 aa20.42■□□□□ 0.86
COL13A1-206ENST00000456019 CCL23P55773 120 aa20.41■□□□□ 0.86
COL13A1-206ENST00000456019 GNPTABQ3T906 1256 aa20.41■□□□□ 0.86
COL13A1-206ENST00000456019 CCDC82Q8N4S0 544 aa20.41■□□□□ 0.86
COL13A1-206ENST00000456019 TCEANC2Q96MN5 208 aa20.41■□□□□ 0.86
COL13A1-206ENST00000456019 MEIS2O14770 477 aa20.4■□□□□ 0.86
COL13A1-206ENST00000456019 ACRP10323 421 aa20.4■□□□□ 0.86
COL13A1-206ENST00000456019 CYP2C9P11712 490 aa20.4■□□□□ 0.86
COL13A1-206ENST00000456019 CHMP4BP1P59074 171 aa20.4■□□□□ 0.86
COL13A1-206ENST00000456019 CELF3Q5SZQ8 465 aaKnown RBP20.4■□□□□ 0.86
COL13A1-206ENST00000456019 MYSM1Q5VVJ2 828 aa20.4■□□□□ 0.86
COL13A1-206ENST00000456019 USP17L6PQ6QN14 398 aa20.4■□□□□ 0.86
COL13A1-206ENST00000456019 ZNF365Q70YC5 407 aa20.4■□□□□ 0.86
COL13A1-206ENST00000456019 KAT2BQ92831 832 aa20.4■□□□□ 0.86
COL13A1-206ENST00000456019 KCNB2Q92953 911 aa20.4■□□□□ 0.86
COL13A1-206ENST00000456019 WNT8AQ9H1J5 351 aa20.4■□□□□ 0.86
COL13A1-206ENST00000456019 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.39■□□□□ 0.85
COL13A1-206ENST00000456019 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.39■□□□□ 0.85
COL13A1-206ENST00000456019 ZBTB43O43298 467 aa20.39■□□□□ 0.85
COL13A1-206ENST00000456019 REC8O95072 547 aa20.39■□□□□ 0.85
COL13A1-206ENST00000456019 GGPS1O95749 300 aa20.39■□□□□ 0.85
COL13A1-206ENST00000456019 UBA1P22314 1058 aaKnown RBP20.39■□□□□ 0.85
COL13A1-206ENST00000456019 HSPA4P34932 840 aa20.39■□□□□ 0.85
COL13A1-206ENST00000456019 MRPS9P82933 396 aaKnown RBP20.39■□□□□ 0.85
COL13A1-206ENST00000456019 RTN1Q16799 776 aa20.39■□□□□ 0.85
COL13A1-206ENST00000456019 SESTD1Q86VW0 696 aa20.39■□□□□ 0.85
COL13A1-206ENST00000456019 RPUSD2Q8IZ73 545 aaKnown RBP20.39■□□□□ 0.85
COL13A1-206ENST00000456019 PPP1R13LQ8WUF5 828 aa20.39■□□□□ 0.85
COL13A1-206ENST00000456019 ZFP91Q96JP5 570 aaPredicted RBP20.39■□□□□ 0.85
COL13A1-206ENST00000456019 SPATA33Q96N06 139 aa20.39■□□□□ 0.85
COL13A1-206ENST00000456019 KATNAL1Q9BW62 490 aa20.39■□□□□ 0.85
COL13A1-206ENST00000456019 MTIF3Q9H2K0 278 aaKnown RBP20.39■□□□□ 0.85
COL13A1-206ENST00000456019 PSTPIP2Q9H939 334 aa20.39■□□□□ 0.85
COL13A1-206ENST00000456019 BRPF3Q9ULD4 1205 aa20.39■□□□□ 0.85
COL13A1-206ENST00000456019 NOD1Q9Y239 953 aa20.39■□□□□ 0.85
COL13A1-206ENST00000456019 hCG_1642624A0A1W2PR95 340 aa20.38■□□□□ 0.85
COL13A1-206ENST00000456019 PPFIA4O75335 1185 aa20.38■□□□□ 0.85
COL13A1-206ENST00000456019 FGBP02675 491 aa20.38■□□□□ 0.85
COL13A1-206ENST00000456019 HOXD8P13378 290 aaPredicted RBP20.38■□□□□ 0.85
COL13A1-206ENST00000456019 FGD1P98174 961 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms