RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 PNMA6FA0A0J9YX94 578 aa13.84□□□□□ -0.19
PDGFB-204ENST00000455790 SH2B2O14492 632 aaPredicted RBP13.84□□□□□ -0.19
PDGFB-204ENST00000455790 SORBS3O60504 671 aa13.84□□□□□ -0.19
PDGFB-204ENST00000455790 PLEKHA8P1O95397 391 aa13.84□□□□□ -0.19
PDGFB-204ENST00000455790 MYCLP12524 364 aaPredicted RBP13.84□□□□□ -0.19
PDGFB-204ENST00000455790 RXRAP19793 462 aa13.84□□□□□ -0.19
PDGFB-204ENST00000455790 CHMP4BP1P59074 171 aa13.84□□□□□ -0.19
PDGFB-204ENST00000455790 PGM5Q15124 567 aa13.84□□□□□ -0.19
PDGFB-204ENST00000455790 BRDTQ58F21 947 aaPredicted RBP13.84□□□□□ -0.19
PDGFB-204ENST00000455790 BMP2KLQ5H9B9 411 aa13.84□□□□□ -0.19
PDGFB-204ENST00000455790 CENPQQ7L2Z9 268 aaPredicted RBP13.84□□□□□ -0.19
PDGFB-204ENST00000455790 RAB11FIP4Q86YS3 637 aa13.84□□□□□ -0.19
PDGFB-204ENST00000455790 KAT2BQ92831 832 aa13.84□□□□□ -0.19
PDGFB-204ENST00000455790 GPKOWQ92917 476 aaPredicted RBP eCLIP13.84□□□□□ -0.19
PDGFB-204ENST00000455790 LRRC2Q9BYS8 371 aa13.84□□□□□ -0.19
PDGFB-204ENST00000455790 ANO2Q9NQ90 1003 aa13.84□□□□□ -0.19
PDGFB-204ENST00000455790 DDX41Q9UJV9 622 aaKnown RBP13.84□□□□□ -0.19
PDGFB-204ENST00000455790 MRVI1Q9Y6F6 885 aa13.84□□□□□ -0.19
PDGFB-204ENST00000455790 KIAA1217Q5T5P2 1943 aa13.84□□□□□ -0.19
PDGFB-204ENST00000455790 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.83□□□□□ -0.2
PDGFB-204ENST00000455790 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.83□□□□□ -0.2
PDGFB-204ENST00000455790 EIF3JO75822 258 aaKnown RBP13.83□□□□□ -0.2
PDGFB-204ENST00000455790 DDAH1O94760 285 aa13.83□□□□□ -0.2
PDGFB-204ENST00000455790 NECTIN1Q15223 517 aa13.83□□□□□ -0.2
PDGFB-204ENST00000455790 NFRKBQ6P4R8 1299 aa13.83□□□□□ -0.2
PDGFB-204ENST00000455790 CASC1Q6TDU7 716 aa13.83□□□□□ -0.2
PDGFB-204ENST00000455790 OTOP2Q7RTS6 562 aa13.83□□□□□ -0.2
PDGFB-204ENST00000455790 FCHSD1Q86WN1 690 aa13.83□□□□□ -0.2
PDGFB-204ENST00000455790 HERVK_113Q902F9 699 aa13.83□□□□□ -0.2
PDGFB-204ENST00000455790 CTAGE1Q96RT6 745 aa13.83□□□□□ -0.2
PDGFB-204ENST00000455790 PBX4Q9BYU1 374 aa13.83□□□□□ -0.2
PDGFB-204ENST00000455790 GCOM1H8Y6P7 765 aaPredicted RBP13.82□□□□□ -0.2
PDGFB-204ENST00000455790 KPNA6O60684 536 aa13.82□□□□□ -0.2
PDGFB-204ENST00000455790 SUPT20HL2P0C7V6 817 aa13.82□□□□□ -0.2
PDGFB-204ENST00000455790 POLR2MP0CAP2 368 aa13.82□□□□□ -0.2
PDGFB-204ENST00000455790 ZNF286BP0CG31 522 aa13.82□□□□□ -0.2
PDGFB-204ENST00000455790 UBA1P22314 1058 aaKnown RBP13.82□□□□□ -0.2
PDGFB-204ENST00000455790 MCM5P33992 734 aa13.82□□□□□ -0.2
PDGFB-204ENST00000455790 SP2Q02086 613 aa13.82□□□□□ -0.2
PDGFB-204ENST00000455790 GRIN2CQ14957 1233 aa13.82□□□□□ -0.2
PDGFB-204ENST00000455790 VSIG10LQ86VR7 867 aa13.82□□□□□ -0.2
PDGFB-204ENST00000455790 CMTR1Q8N1G2 835 aaKnown RBP13.82□□□□□ -0.2
PDGFB-204ENST00000455790 EMID1Q96A84 441 aaPredicted RBP13.82□□□□□ -0.2
PDGFB-204ENST00000455790 TIFAQ96CG3 184 aa13.82□□□□□ -0.2
PDGFB-204ENST00000455790 SPZ1Q9BXG8 430 aa13.82□□□□□ -0.2
PDGFB-204ENST00000455790 VCANP13611 3396 aa13.82□□□□□ -0.2
PDGFB-204ENST00000455790 TANC1Q9C0D5 1861 aa13.81□□□□□ -0.2
PDGFB-204ENST00000455790 TMEM265A0A087WTH1 108 aa13.81□□□□□ -0.2
PDGFB-204ENST00000455790 FGBP02675 491 aa13.81□□□□□ -0.2
PDGFB-204ENST00000455790 GDF6Q6KF10 455 aaPredicted RBP13.81□□□□□ -0.2
PDGFB-204ENST00000455790 NFXL1Q6ZNB6 911 aa13.81□□□□□ -0.2
PDGFB-204ENST00000455790 DEFB128Q7Z7B8 93 aa13.81□□□□□ -0.2
PDGFB-204ENST00000455790 SRBD1Q8N5C6 995 aaKnown RBP13.81□□□□□ -0.2
PDGFB-204ENST00000455790 PPTC7Q8NI37 304 aa13.81□□□□□ -0.2
PDGFB-204ENST00000455790 CTCFLQ8NI51 663 aaPredicted RBP13.81□□□□□ -0.2
PDGFB-204ENST00000455790 TMEM87BQ96K49 555 aa13.81□□□□□ -0.2
PDGFB-204ENST00000455790 MAP3K14Q99558 947 aa13.81□□□□□ -0.2
PDGFB-204ENST00000455790 BCAS3Q9H6U6 928 aa13.81□□□□□ -0.2
PDGFB-204ENST00000455790 MAP3K20Q9NYL2 800 aaKnown RBP13.81□□□□□ -0.2
PDGFB-204ENST00000455790 FRMPD4Q14CM0 1322 aa13.81□□□□□ -0.2
PDGFB-204ENST00000455790 SCN5AQ14524 2016 aa13.81□□□□□ -0.2
PDGFB-204ENST00000455790 hCG_1642624A0A1W2PR95 340 aa13.8□□□□□ -0.2
PDGFB-204ENST00000455790 CCDC69A6NI79 296 aa13.8□□□□□ -0.2
PDGFB-204ENST00000455790 GGPS1O95749 300 aa13.8□□□□□ -0.2
PDGFB-204ENST00000455790 F2P00734 622 aa13.8□□□□□ -0.2
PDGFB-204ENST00000455790 FOSL2P15408 326 aa13.8□□□□□ -0.2
PDGFB-204ENST00000455790 CCND2P30279 289 aa13.8□□□□□ -0.2
PDGFB-204ENST00000455790 KIF5BP33176 963 aa13.8□□□□□ -0.2
PDGFB-204ENST00000455790 MRPS9P82933 396 aaKnown RBP13.8□□□□□ -0.2
PDGFB-204ENST00000455790 PTPN11Q06124 597 aaPredicted RBP13.8□□□□□ -0.2
PDGFB-204ENST00000455790 LAMC2Q13753 1193 aa13.8□□□□□ -0.2
PDGFB-204ENST00000455790 DGKDQ16760 1214 aa13.8□□□□□ -0.2
PDGFB-204ENST00000455790 HSDL1Q3SXM5 330 aa13.8□□□□□ -0.2
PDGFB-204ENST00000455790 CELF3Q5SZQ8 465 aaKnown RBP13.8□□□□□ -0.2
PDGFB-204ENST00000455790 USP17L6PQ6QN14 398 aa13.8□□□□□ -0.2
PDGFB-204ENST00000455790 DHX37Q8IY37 1157 aaKnown RBP13.8□□□□□ -0.2
PDGFB-204ENST00000455790 SAMD3Q8N6K7 520 aa13.8□□□□□ -0.2
PDGFB-204ENST00000455790 MAFAQ8NHW3 353 aaPredicted RBP13.8□□□□□ -0.2
PDGFB-204ENST00000455790 DHX38Q92620 1227 aaKnown RBP13.8□□□□□ -0.2
PDGFB-204ENST00000455790 RRP36Q96EU6 259 aaKnown RBP13.8□□□□□ -0.2
PDGFB-204ENST00000455790 TCEANC2Q96MN5 208 aa13.8□□□□□ -0.2
PDGFB-204ENST00000455790 MTA3Q9BTC8 594 aa13.8□□□□□ -0.2
PDGFB-204ENST00000455790 ZNF576Q9H609 170 aa13.8□□□□□ -0.2
PDGFB-204ENST00000455790 YBX2Q9Y2T7 364 aaKnown RBP13.8□□□□□ -0.2
PDGFB-204ENST00000455790 PITPNM1O00562 1244 aa13.79□□□□□ -0.2
PDGFB-204ENST00000455790 HOXD8P13378 290 aaPredicted RBP13.79□□□□□ -0.2
PDGFB-204ENST00000455790 CASTP20810 708 aaKnown RBP13.79□□□□□ -0.2
PDGFB-204ENST00000455790 LIFRP42702 1097 aa13.79□□□□□ -0.2
PDGFB-204ENST00000455790 PSEN2P49810 448 aa13.79□□□□□ -0.2
PDGFB-204ENST00000455790 RABGGTBP53611 331 aa13.79□□□□□ -0.2
PDGFB-204ENST00000455790 TRAF1Q13077 416 aa13.79□□□□□ -0.2
PDGFB-204ENST00000455790 SEMA3FQ13275 785 aa13.79□□□□□ -0.2
PDGFB-204ENST00000455790 HIC1Q14526 733 aa13.79□□□□□ -0.2
PDGFB-204ENST00000455790 PTGISQ16647 500 aa13.79□□□□□ -0.2
PDGFB-204ENST00000455790 MYSM1Q5VVJ2 828 aa13.79□□□□□ -0.2
PDGFB-204ENST00000455790 SESTD1Q86VW0 696 aa13.79□□□□□ -0.2
PDGFB-204ENST00000455790 MICU3Q86XE3 530 aa13.79□□□□□ -0.2
PDGFB-204ENST00000455790 RASEFQ8IZ41 740 aa13.79□□□□□ -0.2
PDGFB-204ENST00000455790 SPATA33Q96N06 139 aa13.79□□□□□ -0.2
PDGFB-204ENST00000455790 ALG1Q9BT22 464 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms