RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 ZHX1Q9UKY1 873 aaPredicted RBP16.31■□□□□ 0.2
HMGXB4-204ENST00000455359 FAM184BQ9ULE4 1060 aa16.31■□□□□ 0.2
HMGXB4-204ENST00000455359 DOCK3Q8IZD9 2030 aa16.31■□□□□ 0.2
HMGXB4-204ENST00000455359 PLXNB2O15031 1838 aa16.31■□□□□ 0.2
HMGXB4-204ENST00000455359 SMCHD1A6NHR9 2005 aa16.3■□□□□ 0.2
HMGXB4-204ENST00000455359 SEPT4O43236 478 aa16.3■□□□□ 0.2
HMGXB4-204ENST00000455359 AKR1A1P14550 325 aa16.3■□□□□ 0.2
HMGXB4-204ENST00000455359 ICAM3P32942 547 aa16.3■□□□□ 0.2
HMGXB4-204ENST00000455359 MRPS9P82933 396 aaKnown RBP16.3■□□□□ 0.2
HMGXB4-204ENST00000455359 GUCY1B3Q02153 619 aa16.3■□□□□ 0.2
HMGXB4-204ENST00000455359 CEP55Q53EZ4 464 aa16.3■□□□□ 0.2
HMGXB4-204ENST00000455359 TAPT1Q6NXT6 567 aa16.3■□□□□ 0.2
HMGXB4-204ENST00000455359 NOSTRINQ8IVI9 506 aa16.3■□□□□ 0.2
HMGXB4-204ENST00000455359 IL31RAQ8NI17 732 aa16.3■□□□□ 0.2
HMGXB4-204ENST00000455359 GPRASP2Q96D09 838 aa16.3■□□□□ 0.2
HMGXB4-204ENST00000455359 UBIAD1Q9Y5Z9 338 aa16.3■□□□□ 0.2
HMGXB4-204ENST00000455359 ADAMTS3O15072 1205 aa16.29■□□□□ 0.2
HMGXB4-204ENST00000455359 NKRFO15226 690 aaKnown RBP eCLIP16.29■□□□□ 0.28e-7■□□□□ 8.8
HMGXB4-204ENST00000455359 GCFC2P16383 781 aaKnown RBP16.29■□□□□ 0.2
HMGXB4-204ENST00000455359 SYT1P21579 422 aa16.29■□□□□ 0.2
HMGXB4-204ENST00000455359 TRAPPC10P48553 1259 aa16.29■□□□□ 0.2
HMGXB4-204ENST00000455359 TRIM32Q13049 653 aa16.29■□□□□ 0.2
HMGXB4-204ENST00000455359 NR5A1Q13285 461 aa16.29■□□□□ 0.2
HMGXB4-204ENST00000455359 GNL2Q13823 731 aaKnown RBP16.29■□□□□ 0.2
HMGXB4-204ENST00000455359 TTLL4Q14679 1199 aa16.29■□□□□ 0.2
HMGXB4-204ENST00000455359 COL13A1Q5TAT6 717 aaPredicted RBP16.29■□□□□ 0.2
HMGXB4-204ENST00000455359 PIK3AP1Q6ZUJ8 805 aa16.29■□□□□ 0.2
HMGXB4-204ENST00000455359 FBXO16Q8IX29 292 aaPredicted RBP16.29■□□□□ 0.2
HMGXB4-204ENST00000455359 TRPV1Q8NER1 839 aa16.29■□□□□ 0.2
HMGXB4-204ENST00000455359 TBCKQ8TEA7 893 aa16.29■□□□□ 0.2
HMGXB4-204ENST00000455359 JADE2Q9NQC1 790 aa16.29■□□□□ 0.2
HMGXB4-204ENST00000455359 PAK6Q9NQU5 681 aaPredicted RBP16.29■□□□□ 0.2
HMGXB4-204ENST00000455359 Q9Y3F1 56 aa16.29■□□□□ 0.2
HMGXB4-204ENST00000455359 ZSWIM8A7E2V4 1837 aa16.29■□□□□ 0.2
HMGXB4-204ENST00000455359 MYH6P13533 1939 aa16.28■□□□□ 0.2
HMGXB4-204ENST00000455359 CYP3A7-CYP3A51PA0A087WV96 503 aa16.28■□□□□ 0.2
HMGXB4-204ENST00000455359 MEIS1O00470 390 aa16.28■□□□□ 0.2
HMGXB4-204ENST00000455359 FIBPO43427 364 aa16.28■□□□□ 0.2
HMGXB4-204ENST00000455359 RGS20O76081 388 aa16.28■□□□□ 0.2
HMGXB4-204ENST00000455359 ITGB5P18084 799 aa16.28■□□□□ 0.2
HMGXB4-204ENST00000455359 CYP3A7P24462 503 aa16.28■□□□□ 0.2
HMGXB4-204ENST00000455359 ZNF76P36508 570 aa16.28■□□□□ 0.2
HMGXB4-204ENST00000455359 FOSBP53539 338 aa16.28■□□□□ 0.2
HMGXB4-204ENST00000455359 SETQ01105 290 aaPredicted RBP16.28■□□□□ 0.2
HMGXB4-204ENST00000455359 CCDC144BQ3MJ40 725 aa16.28■□□□□ 0.2
HMGXB4-204ENST00000455359 PRAMEF19Q5SWL8 479 aa16.28■□□□□ 0.2
HMGXB4-204ENST00000455359 EEPD1Q7L9B9 569 aa16.28■□□□□ 0.2
HMGXB4-204ENST00000455359 NEK8Q86SG6 692 aa16.28■□□□□ 0.2
HMGXB4-204ENST00000455359 PGBD1Q96JS3 809 aa16.28■□□□□ 0.2
HMGXB4-204ENST00000455359 MXRA8Q9BRK3 442 aa16.28■□□□□ 0.2
HMGXB4-204ENST00000455359 WDR11Q9BZH6 1224 aa16.28■□□□□ 0.2
HMGXB4-204ENST00000455359 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.28■□□□□ 0.2
HMGXB4-204ENST00000455359 FOXD4L1Q9NU39 408 aa16.28■□□□□ 0.2
HMGXB4-204ENST00000455359 DDX20Q9UHI6 824 aaKnown RBP16.28■□□□□ 0.2
HMGXB4-204ENST00000455359 SPATA31C2B4DYI2 1134 aa16.27■□□□□ 0.2
HMGXB4-204ENST00000455359 STX6O43752 255 aa16.27■□□□□ 0.2
HMGXB4-204ENST00000455359 DUSP11O75319 330 aaKnown RBP16.27■□□□□ 0.2
HMGXB4-204ENST00000455359 GJB1P08034 283 aa16.27■□□□□ 0.2
HMGXB4-204ENST00000455359 CCL5P13501 91 aa16.27■□□□□ 0.2
HMGXB4-204ENST00000455359 ORC2Q13416 577 aaPredicted RBP16.27■□□□□ 0.2
HMGXB4-204ENST00000455359 DUSP28Q4G0W2 176 aa16.27■□□□□ 0.2
HMGXB4-204ENST00000455359 PPP4R3AQ6IN85 833 aa16.27■□□□□ 0.2
HMGXB4-204ENST00000455359 CCDC62Q6P9F0 684 aa16.27■□□□□ 0.2
HMGXB4-204ENST00000455359 GIMAP8Q8ND71 665 aaPredicted RBP16.27■□□□□ 0.2
HMGXB4-204ENST00000455359 SENP7Q9BQF6 1050 aa16.27■□□□□ 0.2
HMGXB4-204ENST00000455359 RNF208Q9H0X6 261 aa16.27■□□□□ 0.2
HMGXB4-204ENST00000455359 UNC93B1Q9H1C4 597 aa16.27■□□□□ 0.2
HMGXB4-204ENST00000455359 DAXXQ9UER7 740 aaPredicted RBP16.27■□□□□ 0.2
HMGXB4-204ENST00000455359 MRVI1Q9Y6F6 885 aa16.27■□□□□ 0.2
HMGXB4-204ENST00000455359 HTTP42858 3142 aa16.27■□□□□ 0.2
HMGXB4-204ENST00000455359 RARBP10826 455 aa16.26■□□□□ 0.19
HMGXB4-204ENST00000455359 CNGA1P29973 690 aa16.26■□□□□ 0.19
HMGXB4-204ENST00000455359 CCND3P30281 292 aaPredicted RBP16.26■□□□□ 0.19
HMGXB4-204ENST00000455359 NKX3-2P78367 333 aa16.26■□□□□ 0.19
HMGXB4-204ENST00000455359 TNFAIP2Q03169 654 aa16.26■□□□□ 0.19
HMGXB4-204ENST00000455359 MTMR1Q13613 665 aa16.26■□□□□ 0.19
HMGXB4-204ENST00000455359 INF2Q27J81 1249 aa16.26■□□□□ 0.19
HMGXB4-204ENST00000455359 Q4G0T1 1027 aa16.26■□□□□ 0.19
HMGXB4-204ENST00000455359 MCTP1Q6DN14 999 aa16.26■□□□□ 0.19
HMGXB4-204ENST00000455359 SEPT14Q6ZU15 432 aa16.26■□□□□ 0.19
HMGXB4-204ENST00000455359 BRAPQ7Z569 592 aa16.26■□□□□ 0.19
HMGXB4-204ENST00000455359 MBOAT7Q96N66 472 aa16.26■□□□□ 0.19
HMGXB4-204ENST00000455359 TSHZ2Q9NRE2 1034 aa16.26■□□□□ 0.19
HMGXB4-204ENST00000455359 RTEL1Q9NZ71 1219 aa16.26■□□□□ 0.19
HMGXB4-204ENST00000455359 DDX41Q9UJV9 622 aaKnown RBP16.26■□□□□ 0.19
HMGXB4-204ENST00000455359 NOL7Q9UMY1 257 aaKnown RBP16.26■□□□□ 0.19
HMGXB4-204ENST00000455359 MTMR6Q9Y217 621 aa16.26■□□□□ 0.19
HMGXB4-204ENST00000455359 FAM86B1E9PN63 330 aa16.25■□□□□ 0.19
HMGXB4-204ENST00000455359 FAM86B2P0C5J1 330 aa16.25■□□□□ 0.19
HMGXB4-204ENST00000455359 TXNP10599 105 aaKnown RBP16.25■□□□□ 0.19
HMGXB4-204ENST00000455359 ADCYAP1R1P41586 468 aa16.25■□□□□ 0.19
HMGXB4-204ENST00000455359 NEDD9Q14511 834 aa16.25■□□□□ 0.19
HMGXB4-204ENST00000455359 MTFR1Q15390 333 aa16.25■□□□□ 0.19
HMGXB4-204ENST00000455359 RILPL1Q5EBL4 403 aa16.25■□□□□ 0.19
HMGXB4-204ENST00000455359 EMID1Q96A84 441 aaPredicted RBP16.25■□□□□ 0.19
HMGXB4-204ENST00000455359 TMEM106CQ9BVX2 250 aa16.25■□□□□ 0.19
HMGXB4-204ENST00000455359 ZSCAN16Q9H4T2 348 aaPredicted RBP16.25■□□□□ 0.19
HMGXB4-204ENST00000455359 SPC25Q9HBM1 224 aa16.25■□□□□ 0.19
HMGXB4-204ENST00000455359 PDGFCQ9NRA1 345 aa16.25■□□□□ 0.19
HMGXB4-204ENST00000455359 GNEQ9Y223 722 aaKnown RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms