RNA–Protein interactions for RNA: ENST00000454642.3

CDH19-202, Transcript of cadherin 19, humanhuman

TSL 5

Gene CDH19, Length 1,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-202ENST00000454642 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.11□□□□□ -1.27
CDH19-202ENST00000454642 CHAMP1Q96JM3 812 aa7.11□□□□□ -1.27
CDH19-202ENST00000454642 AASDHPPTQ9NRN7 309 aa7.11□□□□□ -1.27
CDH19-202ENST00000454642 THG1LQ9NWX6 298 aaKnown RBP7.11□□□□□ -1.27
CDH19-202ENST00000454642 ZIM2Q9NZV7 527 aa7.11□□□□□ -1.27
CDH19-202ENST00000454642 TCFL5Q9UL49 500 aa7.11□□□□□ -1.27
CDH19-202ENST00000454642 EPRSP07814 1512 aaKnown RBP7.1□□□□□ -1.27
CDH19-202ENST00000454642 CCDC194A0A1B0GVG4 234 aa7.1□□□□□ -1.27
CDH19-202ENST00000454642 H3BS24 57 aa7.1□□□□□ -1.27
CDH19-202ENST00000454642 IGF2BP3O00425 579 aaKnown RBP eCLIP7.1□□□□□ -1.27
CDH19-202ENST00000454642 TRAF5O00463 557 aa7.1□□□□□ -1.27
CDH19-202ENST00000454642 TSPAN6O43657 245 aa7.1□□□□□ -1.27
CDH19-202ENST00000454642 ZEB2O60315 1214 aa7.1□□□□□ -1.27
CDH19-202ENST00000454642 FKBP9O95302 570 aa7.1□□□□□ -1.27
CDH19-202ENST00000454642 SCGB1D2O95969 90 aa7.1□□□□□ -1.27
CDH19-202ENST00000454642 F2P00734 622 aa7.1□□□□□ -1.27
CDH19-202ENST00000454642 SRFP11831 508 aa7.1□□□□□ -1.27
CDH19-202ENST00000454642 PAMP19021 973 aa7.1□□□□□ -1.27
CDH19-202ENST00000454642 PCBP3P57721 371 aaKnown RBP7.1□□□□□ -1.27
CDH19-202ENST00000454642 TMEM177Q53S58 311 aa7.1□□□□□ -1.27
CDH19-202ENST00000454642 RTP2Q5QGT7 225 aa7.1□□□□□ -1.27
CDH19-202ENST00000454642 E4F1Q66K89 784 aaPredicted RBP7.1□□□□□ -1.27
CDH19-202ENST00000454642 IQSEC1Q6DN90 963 aa7.1□□□□□ -1.27
CDH19-202ENST00000454642 RCSD1Q6JBY9 416 aa7.1□□□□□ -1.27
CDH19-202ENST00000454642 C22orf34Q6ZV56 151 aa7.1□□□□□ -1.27
CDH19-202ENST00000454642 FKBP9P1Q75LS8 142 aa7.1□□□□□ -1.27
CDH19-202ENST00000454642 CCDC146Q8IYE0 955 aa7.1□□□□□ -1.27
CDH19-202ENST00000454642 CISD2Q8N5K1 135 aaKnown RBP7.1□□□□□ -1.27
CDH19-202ENST00000454642 USHBP1Q8N6Y0 703 aa7.1□□□□□ -1.27
CDH19-202ENST00000454642 PUS7LQ9H0K6 701 aaKnown RBP7.1□□□□□ -1.27
CDH19-202ENST00000454642 CABP5Q9NP86 173 aa7.1□□□□□ -1.27
CDH19-202ENST00000454642 ZSWIM5Q9P217 1185 aa7.1□□□□□ -1.27
CDH19-202ENST00000454642 STOML1Q9UBI4 398 aa7.1□□□□□ -1.27
CDH19-202ENST00000454642 PPARGC1AQ9UBK2 798 aaKnown RBP7.1□□□□□ -1.27
CDH19-202ENST00000454642 APOBEC2Q9Y235 224 aaKnown RBP7.1□□□□□ -1.27
CDH19-202ENST00000454642 ZKSCAN5Q9Y2L8 839 aa7.1□□□□□ -1.27
CDH19-202ENST00000454642 CFAP43Q8NDM7 1665 aa7.1□□□□□ -1.27
CDH19-202ENST00000454642 UACAQ9BZF9 1416 aa7.1□□□□□ -1.27
CDH19-202ENST00000454642 CCDC66A2RUB6 948 aa7.09□□□□□ -1.27
CDH19-202ENST00000454642 AKAP10O43572 662 aa7.09□□□□□ -1.27
CDH19-202ENST00000454642 ZNF205O95201 554 aa7.09□□□□□ -1.27
CDH19-202ENST00000454642 CKMP06732 381 aa7.09□□□□□ -1.27
CDH19-202ENST00000454642 TPP2P29144 1249 aaPredicted RBP7.09□□□□□ -1.27
CDH19-202ENST00000454642 DSG1Q02413 1049 aa7.09□□□□□ -1.27
CDH19-202ENST00000454642 KCNAB2Q13303 367 aa7.09□□□□□ -1.27
CDH19-202ENST00000454642 LAPTM5Q13571 262 aa7.09□□□□□ -1.27
CDH19-202ENST00000454642 TSPYL5Q86VY4 417 aaPredicted RBP7.09□□□□□ -1.27
CDH19-202ENST00000454642 ANKLE2Q86XL3 938 aa7.09□□□□□ -1.27
CDH19-202ENST00000454642 SMC1BQ8NDV3 1235 aa7.09□□□□□ -1.27
CDH19-202ENST00000454642 TRIT1Q9H3H1 467 aaKnown RBP7.09□□□□□ -1.27
CDH19-202ENST00000454642 UGGT2Q9NYU1 1516 aa7.09□□□□□ -1.27
CDH19-202ENST00000454642 GABRDO14764 452 aa7.09□□□□□ -1.27
CDH19-202ENST00000454642 PRC1O43663 620 aa7.09□□□□□ -1.27
CDH19-202ENST00000454642 PEX14O75381 377 aa7.09□□□□□ -1.27
CDH19-202ENST00000454642 SOD2P04179 222 aa7.09□□□□□ -1.27
CDH19-202ENST00000454642 CHRNA4P43681 627 aa7.09□□□□□ -1.27
CDH19-202ENST00000454642 ST5P78524 1137 aa7.09□□□□□ -1.27
CDH19-202ENST00000454642 ATP13A4Q4VNC1 1196 aa7.09□□□□□ -1.27
CDH19-202ENST00000454642 SYDE2Q5VT97 1194 aa7.09□□□□□ -1.27
CDH19-202ENST00000454642 ZPBP2Q6X784 338 aa7.09□□□□□ -1.27
CDH19-202ENST00000454642 ZBTB46Q86UZ6 589 aa7.09□□□□□ -1.27
CDH19-202ENST00000454642 CHTF18Q8WVB6 975 aa7.09□□□□□ -1.27
CDH19-202ENST00000454642 UBE2FQ969M7 185 aa7.09□□□□□ -1.27
CDH19-202ENST00000454642 HOOK2Q96ED9 719 aa7.09□□□□□ -1.27
CDH19-202ENST00000454642 C8orf48Q96LL4 319 aa7.09□□□□□ -1.27
CDH19-202ENST00000454642 HSPA12BQ96MM6 686 aa7.09□□□□□ -1.27
CDH19-202ENST00000454642 KCNJ15Q99712 375 aa7.09□□□□□ -1.27
CDH19-202ENST00000454642 IPPKQ9H8X2 491 aa7.09□□□□□ -1.27
CDH19-202ENST00000454642 LRRC4CQ9HCJ2 640 aa7.09□□□□□ -1.27
CDH19-202ENST00000454642 SPTLC3Q9NUV7 552 aa7.09□□□□□ -1.27
CDH19-202ENST00000454642 BTG4Q9NY30 223 aa7.09□□□□□ -1.27
CDH19-202ENST00000454642 FBXL7Q9UJT9 491 aa7.09□□□□□ -1.27
CDH19-202ENST00000454642 ZCCHC11Q5TAX3 1644 aaKnown RBP7.08□□□□□ -1.28
CDH19-202ENST00000454642 MAGI3Q5TCQ9 1506 aa7.08□□□□□ -1.28
CDH19-202ENST00000454642 PRKD3O94806 890 aa7.08□□□□□ -1.28
CDH19-202ENST00000454642 LTKP29376 864 aa7.08□□□□□ -1.28
CDH19-202ENST00000454642 NKPD1Q17RQ9 610 aa7.08□□□□□ -1.28
CDH19-202ENST00000454642 KIZQ2M2Z5 673 aa7.08□□□□□ -1.28
CDH19-202ENST00000454642 IQCEQ6IPM2 695 aa7.08□□□□□ -1.28
CDH19-202ENST00000454642 HDGFL2Q7Z4V5 671 aaPredicted RBP7.08□□□□□ -1.28
CDH19-202ENST00000454642 NAT16Q8N8M0 369 aa7.08□□□□□ -1.28
CDH19-202ENST00000454642 TP53INP1Q96A56 240 aa7.08□□□□□ -1.28
CDH19-202ENST00000454642 CELF4Q9BZC1 486 aaKnown RBP7.08□□□□□ -1.28
CDH19-202ENST00000454642 VTA1Q9NP79 307 aa7.08□□□□□ -1.28
CDH19-202ENST00000454642 EMC7Q9NPA0 242 aa7.08□□□□□ -1.28
CDH19-202ENST00000454642 H2AFY2Q9P0M6 372 aaPredicted RBP7.08□□□□□ -1.28
CDH19-202ENST00000454642 RAXQ9Y2V3 346 aa7.08□□□□□ -1.28
CDH19-202ENST00000454642 PTPDC1A2A3K4 754 aa7.07□□□□□ -1.28
CDH19-202ENST00000454642 ABCB5Q2M3G0 1257 aa7.07□□□□□ -1.28
CDH19-202ENST00000454642 XP32Q5T750 250 aa7.07□□□□□ -1.28
CDH19-202ENST00000454642 DUSP27Q5VZP5 1158 aa7.07□□□□□ -1.28
CDH19-202ENST00000454642 C14orf80Q86SX3 495 aa7.07□□□□□ -1.28
CDH19-202ENST00000454642 KIF18BQ86Y91 864 aa7.07□□□□□ -1.28
CDH19-202ENST00000454642 CHPFQ8IZ52 775 aa7.07□□□□□ -1.28
CDH19-202ENST00000454642 CHST14Q8NCH0 376 aa7.07□□□□□ -1.28
CDH19-202ENST00000454642 LINC00116Q8NCU8 138 aa7.07□□□□□ -1.28
CDH19-202ENST00000454642 PTCHD1Q96NR3 888 aa7.07□□□□□ -1.28
CDH19-202ENST00000454642 ORAI3Q9BRQ5 295 aa7.07□□□□□ -1.28
CDH19-202ENST00000454642 SSBP4Q9BWG4 385 aaPredicted RBP7.07□□□□□ -1.28
CDH19-202ENST00000454642 CATSPERZQ9NTU4 200 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms