RNA–Protein interactions for RNA: ENST00000454258.2

AC006539.3-201, humanhuman

BASIC

Gene AC006539.3, Length 129 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006539.3-201ENST00000454258 DPF2Q92785 391 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 AIDAQ96BJ3 306 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 SPDL1Q96EA4 605 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 RRP36Q96EU6 259 aaKnown RBP3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 PBKQ96KB5 322 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 AK8Q96MA6 479 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 ERGIC2Q96RQ1 377 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 CDC5LQ99459 802 aaKnown RBP3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 EYA1Q99502 592 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 TSC22D3Q99576 134 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 SLF1Q9BQI6 1058 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 METTL22Q9BUU2 404 aaPredicted RBP3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 SPZ1Q9BXG8 430 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 MIS12Q9H081 205 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 ISCUQ9H1K1 167 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 SH2D4AQ9H788 454 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 PPCSQ9HAB8 311 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 NOD2Q9HC29 1040 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 GDF3Q9NR23 364 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 STRN4Q9NRL3 753 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 CHCHD3Q9NX63 227 aaKnown RBP3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 IL1RAPL1Q9NZN1 696 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 CTTNBP2NLQ9P2B4 639 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 FAM198AQ9UFP1 575 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 CIDEBQ9UHD4 219 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 DBNLQ9UJU6 430 aaKnown RBP3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 FBXO2Q9UK22 296 aaPredicted RBP3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 ZMIZ1Q9ULJ6 1067 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 SLC12A4Q9UP95 1085 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 RIPOR2Q9Y4F9 1068 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 BZW2Q9Y6E2 419 aaKnown RBP3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 LRP6O75581 1613 aa3.8□□□□□ -1.8
AC006539.3-201ENST00000454258 AFF2P51816 1311 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 NEURL1BA8MQ27 555 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 UBAP1LF5GYI3 381 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 H7C1W4 665 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 RBAK-RBAKDNI3L0D1 243 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 AGPSO00116 658 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 PGRMC1O00264 195 aaKnown RBP3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 AKR1B10O60218 316 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 RTN2O75298 545 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 HEXIM1O94992 359 aaKnown RBP3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 RTN3O95197 1032 aaPredicted RBP3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 KIF4AO95239 1232 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 NPTXRO95502 500 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 ATP6V1G2O95670 118 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 BAG3O95817 575 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 AGTP01019 485 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 ATP1A1P05023 1023 aaKnown RBP3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 IFIT1P09914 478 aaKnown RBP3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 NUDT7P0C024 238 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 NUDT17P0C025 328 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 USP17L8P0C7I0 530 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 UQCRFS1P1P0C7P4 283 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 SRGNP10124 158 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 SKIP12755 728 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 FDPSP14324 419 aaKnown RBP3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 NDUFV2P19404 249 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 DNAJB2P25686 324 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 MARCKSP29966 332 aaPredicted RBP3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 KRT2P35908 639 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 MAGEA8P43361 318 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 PSMD7P51665 324 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 RPS6KA3P51812 740 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 LRRC63Q05C16 580 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 VAC14Q08AM6 782 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 DPYDQ12882 1025 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 IFT88Q13099 833 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 CUL3Q13618 768 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 BLMHQ13867 455 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 MAP7Q14244 749 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 GCKRQ14397 625 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 ZNF268Q14587 947 aaPredicted RBP3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 UBE3CQ15386 1083 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 ALX1Q15699 326 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 GSTA3Q16772 222 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 RTN1Q16799 776 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 SLC5A9Q2M3M2 681 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 SLC9C1Q4G0N8 1177 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 LRRC23Q53EV4 343 aaPredicted RBP3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 CCDC178Q5BJE1 867 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 SLC9C2Q5TAH2 1124 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 HAUS3Q68CZ6 603 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 NCAPH2Q6IBW4 605 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 TLDC1Q6P9B6 456 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 APTXQ7Z2E3 356 aaKnown RBP3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 NPAS4Q8IUM7 802 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 ZSCAN29Q8IWY8 852 aaPredicted RBP3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 DIS3L2Q8IYB7 885 aaKnown RBP3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 RNF168Q8IYW5 571 aaPredicted RBP3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 IQCKQ8N0W5 287 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 GALNT15Q8N3T1 639 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 MB21D1Q8N884 522 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 ACRBPQ8NEB7 543 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 NEK9Q8TD19 979 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 MICAL1Q8TDZ2 1067 aa3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 SMCR8Q8TEV9 937 aaPredicted RBP3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 ZNF483Q8TF39 744 aaPredicted RBP3.79□□□□□ -1.8
AC006539.3-201ENST00000454258 GIPC2Q8TF65 315 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms