RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 OTUD7AQ8TE49 926 aaPredicted RBP25.58■■□□□ 1.69
TNFRSF25-208ENST00000453341 WNT8BQ93098 351 aa25.58■■□□□ 1.69
TNFRSF25-208ENST00000453341 C17orf80Q9BSJ5 609 aa25.58■■□□□ 1.69
TNFRSF25-208ENST00000453341 TTC41PQ6P2S7 1318 aa25.58■■□□□ 1.69
TNFRSF25-208ENST00000453341 KIAA1217Q5T5P2 1943 aa25.57■■□□□ 1.68
TNFRSF25-208ENST00000453341 GH1P01241 217 aa25.57■■□□□ 1.68
TNFRSF25-208ENST00000453341 MBTPS1Q14703 1052 aa25.57■■□□□ 1.68
TNFRSF25-208ENST00000453341 TRIM71Q2Q1W2 868 aaKnown RBP25.57■■□□□ 1.68
TNFRSF25-208ENST00000453341 HDAC6Q9UBN7 1215 aa25.57■■□□□ 1.68
TNFRSF25-208ENST00000453341 MYO7AQ13402 2215 aa25.57■■□□□ 1.68
TNFRSF25-208ENST00000453341 MICAL3Q7RTP6 2002 aa25.56■■□□□ 1.68
TNFRSF25-208ENST00000453341 GRXCR2A6NFK2 248 aa25.56■■□□□ 1.68
TNFRSF25-208ENST00000453341 ZNF543Q08ER8 600 aa25.56■■□□□ 1.68
TNFRSF25-208ENST00000453341 SEPT14Q6ZU15 432 aa25.56■■□□□ 1.68
TNFRSF25-208ENST00000453341 CHST3Q7LGC8 479 aa25.56■■□□□ 1.68
TNFRSF25-208ENST00000453341 UIMC1Q96RL1 719 aa25.56■■□□□ 1.68
TNFRSF25-208ENST00000453341 PNMA2Q9UL42 364 aa25.56■■□□□ 1.68
TNFRSF25-208ENST00000453341 ZNF318Q5VUA4 2279 aa25.56■■□□□ 1.68
TNFRSF25-208ENST00000453341 B4DLN1 442 aa25.55■■□□□ 1.68
TNFRSF25-208ENST00000453341 MRPL12P52815 198 aaKnown RBP25.55■■□□□ 1.68
TNFRSF25-208ENST00000453341 IKBKEQ14164 716 aa25.55■■□□□ 1.68
TNFRSF25-208ENST00000453341 USH1GQ495M9 461 aa25.55■■□□□ 1.68
TNFRSF25-208ENST00000453341 RRP12Q5JTH9 1297 aaKnown RBP25.55■■□□□ 1.68
TNFRSF25-208ENST00000453341 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.55■■□□□ 1.68
TNFRSF25-208ENST00000453341 FBXO22Q8NEZ5 403 aa25.55■■□□□ 1.68
TNFRSF25-208ENST00000453341 TBC1D5Q92609 795 aa25.55■■□□□ 1.68
TNFRSF25-208ENST00000453341 TCP11L1Q9NUJ3 509 aa25.55■■□□□ 1.68
TNFRSF25-208ENST00000453341 EFCAB14O75071 495 aa25.54■■□□□ 1.68
TNFRSF25-208ENST00000453341 ALADP13716 330 aa25.54■■□□□ 1.68
TNFRSF25-208ENST00000453341 MRE11P49959 708 aa25.54■■□□□ 1.68
TNFRSF25-208ENST00000453341 MKRN4PQ13434 485 aaPredicted RBP25.54■■□□□ 1.68
TNFRSF25-208ENST00000453341 ZNF618Q5T7W0 954 aa25.54■■□□□ 1.68
TNFRSF25-208ENST00000453341 NEK9Q8TD19 979 aa25.54■■□□□ 1.68
TNFRSF25-208ENST00000453341 CRBNQ96SW2 442 aa25.54■■□□□ 1.68
TNFRSF25-208ENST00000453341 ALG1Q9BT22 464 aa25.54■■□□□ 1.68
TNFRSF25-208ENST00000453341 TOMM22Q9NS69 142 aa25.54■■□□□ 1.68
TNFRSF25-208ENST00000453341 COL20A1Q9P218 1284 aa25.54■■□□□ 1.68
TNFRSF25-208ENST00000453341 H3BQ06 376 aaPredicted RBP25.53■■□□□ 1.68
TNFRSF25-208ENST00000453341 SNHG28P0DPA3 235 aa25.53■■□□□ 1.68
TNFRSF25-208ENST00000453341 CASTP20810 708 aaKnown RBP25.53■■□□□ 1.68
TNFRSF25-208ENST00000453341 PSEN2P49810 448 aa25.53■■□□□ 1.68
TNFRSF25-208ENST00000453341 ZNF200P98182 395 aaPredicted RBP25.53■■□□□ 1.68
TNFRSF25-208ENST00000453341 PTK7Q13308 1070 aa25.53■■□□□ 1.68
TNFRSF25-208ENST00000453341 C7orf31Q8N865 590 aa25.53■■□□□ 1.68
TNFRSF25-208ENST00000453341 RGS22Q8NE09 1264 aa25.53■■□□□ 1.68
TNFRSF25-208ENST00000453341 TAAR1Q96RJ0 339 aa25.53■■□□□ 1.68
TNFRSF25-208ENST00000453341 CPVLQ9H3G5 476 aa25.53■■□□□ 1.68
TNFRSF25-208ENST00000453341 NHLH1Q02575 133 aa25.52■■□□□ 1.68
TNFRSF25-208ENST00000453341 HIC1Q14526 733 aa25.52■■□□□ 1.68
TNFRSF25-208ENST00000453341 ALX1Q15699 326 aa25.52■■□□□ 1.68
TNFRSF25-208ENST00000453341 DGKDQ16760 1214 aa25.52■■□□□ 1.68
TNFRSF25-208ENST00000453341 MRPL38Q96DV4 380 aaKnown RBP25.52■■□□□ 1.68
TNFRSF25-208ENST00000453341 INSL6Q9Y581 213 aa25.52■■□□□ 1.68
TNFRSF25-208ENST00000453341 HAS3O00219 553 aa25.51■■□□□ 1.67
TNFRSF25-208ENST00000453341 LGR5O75473 907 aa25.51■■□□□ 1.67
TNFRSF25-208ENST00000453341 ZNF286BP0CG31 522 aa25.51■■□□□ 1.67
TNFRSF25-208ENST00000453341 HTRA4P83105 476 aaPredicted RBP25.51■■□□□ 1.67
TNFRSF25-208ENST00000453341 MFSD10Q14728 455 aa25.51■■□□□ 1.67
TNFRSF25-208ENST00000453341 SP7Q8TDD2 431 aaPredicted RBP25.51■■□□□ 1.67
TNFRSF25-208ENST00000453341 SYTL5Q8TDW5 730 aaPredicted RBP25.51■■□□□ 1.67
TNFRSF25-208ENST00000453341 MYH7BA7E2Y1 1941 aa25.51■■□□□ 1.67
TNFRSF25-208ENST00000453341 POTEB3A0JP26 581 aa25.5■■□□□ 1.67
TNFRSF25-208ENST00000453341 DCXO43602 365 aa25.5■■□□□ 1.67
TNFRSF25-208ENST00000453341 F2P00734 622 aa25.5■■□□□ 1.67
TNFRSF25-208ENST00000453341 GOLGA8HP0CJ92 632 aa25.5■■□□□ 1.67
TNFRSF25-208ENST00000453341 CSPP1Q1MSJ5 1256 aa25.5■■□□□ 1.67
TNFRSF25-208ENST00000453341 POTEBQ6S5H4 581 aa25.5■■□□□ 1.67
TNFRSF25-208ENST00000453341 FBXL18Q96ME1 805 aa25.5■■□□□ 1.67
TNFRSF25-208ENST00000453341 UBA5Q9GZZ9 404 aa25.5■■□□□ 1.67
TNFRSF25-208ENST00000453341 DDX41Q9UJV9 622 aaKnown RBP25.5■■□□□ 1.67
TNFRSF25-208ENST00000453341 KIAA0753Q2KHM9 967 aa25.49■■□□□ 1.67
TNFRSF25-208ENST00000453341 PUS10Q3MIT2 529 aaKnown RBP25.49■■□□□ 1.67
TNFRSF25-208ENST00000453341 EPC2Q52LR7 807 aa25.49■■□□□ 1.67
TNFRSF25-208ENST00000453341 MYOCDQ8IZQ8 938 aa25.49■■□□□ 1.67
TNFRSF25-208ENST00000453341 DBF4BQ8NFT6 615 aa25.49■■□□□ 1.67
TNFRSF25-208ENST00000453341 NSUN6Q8TEA1 469 aaKnown RBP25.49■■□□□ 1.67
TNFRSF25-208ENST00000453341 EMID1Q96A84 441 aaPredicted RBP25.49■■□□□ 1.67
TNFRSF25-208ENST00000453341 RCAN3Q9UKA8 241 aa25.49■■□□□ 1.67
TNFRSF25-208ENST00000453341 FGAP02671 866 aa25.48■■□□□ 1.67
TNFRSF25-208ENST00000453341 STXBP2Q15833 593 aa25.48■■□□□ 1.67
TNFRSF25-208ENST00000453341 KATNAL1Q9BW62 490 aa25.48■■□□□ 1.67
TNFRSF25-208ENST00000453341 AMHP03971 560 aa25.47■■□□□ 1.67
TNFRSF25-208ENST00000453341 ZP2Q05996 745 aa25.47■■□□□ 1.67
TNFRSF25-208ENST00000453341 COL19A1Q14993 1142 aa25.47■■□□□ 1.67
TNFRSF25-208ENST00000453341 TIGD5Q53EQ6 642 aa25.47■■□□□ 1.67
TNFRSF25-208ENST00000453341 TCEAL5Q5H9L2 206 aa25.47■■□□□ 1.67
TNFRSF25-208ENST00000453341 PPTC7Q8NI37 304 aa25.47■■□□□ 1.67
TNFRSF25-208ENST00000453341 IWS1Q96ST2 819 aa25.47■■□□□ 1.67
TNFRSF25-208ENST00000453341 RMDN3Q96TC7 470 aa25.47■■□□□ 1.67
TNFRSF25-208ENST00000453341 CTNNA3Q9UI47 895 aa25.47■■□□□ 1.67
TNFRSF25-208ENST00000453341 ATG2AQ2TAZ0 1938 aa25.46■■□□□ 1.67
TNFRSF25-208ENST00000453341 MX1P20591 662 aa25.46■■□□□ 1.67
TNFRSF25-208ENST00000453341 CDC37Q16543 378 aaPredicted RBP25.46■■□□□ 1.67
TNFRSF25-208ENST00000453341 PTPROQ16827 1216 aa25.46■■□□□ 1.67
TNFRSF25-208ENST00000453341 MIER1Q8N108 512 aa25.46■■□□□ 1.67
TNFRSF25-208ENST00000453341 BANK1Q8NDB2 785 aa25.46■■□□□ 1.67
TNFRSF25-208ENST00000453341 ANKS1AQ92625 1134 aa25.46■■□□□ 1.67
TNFRSF25-208ENST00000453341 PABPC5Q96DU9 382 aaKnown RBP25.46■■□□□ 1.67
TNFRSF25-208ENST00000453341 TTC14Q96N46 770 aa25.46■■□□□ 1.67
TNFRSF25-208ENST00000453341 NLRC5Q86WI3 1866 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms