RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 PHF20Q9BVI0 1012 aa17.98■□□□□ 0.47
VCX3B-204ENST00000453306 RIC8AQ9NPQ8 531 aa17.98■□□□□ 0.47
VCX3B-204ENST00000453306 SH3GLB2Q9NR46 395 aa17.98■□□□□ 0.47
VCX3B-204ENST00000453306 ESYT2A0FGR8 921 aa17.97■□□□□ 0.47
VCX3B-204ENST00000453306 CALML3P27482 149 aa17.97■□□□□ 0.47
VCX3B-204ENST00000453306 CLK2P49760 499 aaKnown RBP17.97■□□□□ 0.47
VCX3B-204ENST00000453306 HMGN5P82970 282 aaKnown RBP17.97■□□□□ 0.47
VCX3B-204ENST00000453306 GUCY1B3Q02153 619 aa17.97■□□□□ 0.47
VCX3B-204ENST00000453306 KRT40Q6A162 431 aa17.97■□□□□ 0.47
VCX3B-204ENST00000453306 PPP1R18Q6NYC8 613 aa17.97■□□□□ 0.47
VCX3B-204ENST00000453306 ANKRD35Q8N283 1001 aa17.97■□□□□ 0.47
VCX3B-204ENST00000453306 RASGRP4Q8TDF6 673 aa17.97■□□□□ 0.47
VCX3B-204ENST00000453306 BADQ92934 168 aa17.97■□□□□ 0.47
VCX3B-204ENST00000453306 PDLIM7Q9NR12 457 aa17.97■□□□□ 0.47
VCX3B-204ENST00000453306 SMC3Q9UQE7 1217 aa17.97■□□□□ 0.47
VCX3B-204ENST00000453306 SYNGAP1Q96PV0 1343 aa17.97■□□□□ 0.47
VCX3B-204ENST00000453306 GCOM1H8Y6P7 765 aaPredicted RBP17.96■□□□□ 0.47
VCX3B-204ENST00000453306 hCG_1984214I3L0E3 225 aa17.96■□□□□ 0.47
VCX3B-204ENST00000453306 PIK3CDO00329 1044 aa17.96■□□□□ 0.47
VCX3B-204ENST00000453306 PGK1P00558 417 aa17.96■□□□□ 0.47
VCX3B-204ENST00000453306 POLR2MP0CAP2 368 aa17.96■□□□□ 0.47
VCX3B-204ENST00000453306 TLE2Q04725 743 aa17.96■□□□□ 0.47
VCX3B-204ENST00000453306 SHHQ15465 462 aa17.96■□□□□ 0.47
VCX3B-204ENST00000453306 ZNF713Q8N859 430 aaPredicted RBP17.96■□□□□ 0.47
VCX3B-204ENST00000453306 PGBD1Q96JS3 809 aa17.96■□□□□ 0.47
VCX3B-204ENST00000453306 TSEN34Q9BSV6 310 aaKnown RBP17.96■□□□□ 0.47
VCX3B-204ENST00000453306 FAM184BQ9ULE4 1060 aa17.96■□□□□ 0.47
VCX3B-204ENST00000453306 CLTBP09497 229 aa17.95■□□□□ 0.46
VCX3B-204ENST00000453306 ZNF865P0CJ78 1059 aaPredicted RBP17.95■□□□□ 0.46
VCX3B-204ENST00000453306 ADCY7P51828 1080 aa17.95■□□□□ 0.46
VCX3B-204ENST00000453306 NLRP5P59047 1200 aa17.95■□□□□ 0.46
VCX3B-204ENST00000453306 TRAF1Q13077 416 aa17.95■□□□□ 0.46
VCX3B-204ENST00000453306 EARS2Q5JPH6 523 aaKnown RBP17.95■□□□□ 0.46
VCX3B-204ENST00000453306 ZNF467Q7Z7K2 595 aaPredicted RBP17.95■□□□□ 0.46
VCX3B-204ENST00000453306 MCF2L2Q86YR7 1114 aa17.95■□□□□ 0.46
VCX3B-204ENST00000453306 FBXO18Q8NFZ0 1043 aa17.95■□□□□ 0.46
VCX3B-204ENST00000453306 IL31RAQ8NI17 732 aa17.95■□□□□ 0.46
VCX3B-204ENST00000453306 TNFRSF25Q93038 417 aa17.95■□□□□ 0.46
VCX3B-204ENST00000453306 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.95■□□□□ 0.46
VCX3B-204ENST00000453306 LTBP2Q14767 1821 aa17.94■□□□□ 0.46
VCX3B-204ENST00000453306 A0A1W2PQ45 241 aaPredicted RBP17.94■□□□□ 0.46
VCX3B-204ENST00000453306 A0A1W2PQY0 241 aa17.94■□□□□ 0.46
VCX3B-204ENST00000453306 TRIM43BA6NCK2 446 aa17.94■□□□□ 0.46
VCX3B-204ENST00000453306 MOXD2PA6NHM9 499 aa17.94■□□□□ 0.46
VCX3B-204ENST00000453306 SMAD3P84022 425 aaKnown RBP17.94■□□□□ 0.46
VCX3B-204ENST00000453306 JAKMIP3Q5VZ66 844 aa17.94■□□□□ 0.46
VCX3B-204ENST00000453306 MAMDC4Q6UXC1 1216 aa17.94■□□□□ 0.46
VCX3B-204ENST00000453306 FCHSD1Q86WN1 690 aa17.94■□□□□ 0.46
VCX3B-204ENST00000453306 WASF1Q92558 559 aa17.94■□□□□ 0.46
VCX3B-204ENST00000453306 TRIM43Q96BQ3 446 aaPredicted RBP17.94■□□□□ 0.46
VCX3B-204ENST00000453306 PCDHA6Q9UN73 950 aa17.94■□□□□ 0.46
VCX3B-204ENST00000453306 PCDHA4Q9UN74 947 aa17.94■□□□□ 0.46
VCX3B-204ENST00000453306 PCDHA8Q9Y5H6 950 aa17.94■□□□□ 0.46
VCX3B-204ENST00000453306 FAM205CA6NFA0 338 aa17.93■□□□□ 0.46
VCX3B-204ENST00000453306 MMP1P03956 469 aa17.93■□□□□ 0.46
VCX3B-204ENST00000453306 RAG1P15918 1043 aa17.93■□□□□ 0.46
VCX3B-204ENST00000453306 MRPL12P52815 198 aaKnown RBP17.93■□□□□ 0.46
VCX3B-204ENST00000453306 NR5A1Q13285 461 aa17.93■□□□□ 0.46
VCX3B-204ENST00000453306 SH3RF1Q7Z6J0 888 aa17.93■□□□□ 0.46
VCX3B-204ENST00000453306 BLIDQ8IZY5 108 aa17.93■□□□□ 0.46
VCX3B-204ENST00000453306 FAM184AQ8NB25 1140 aa17.93■□□□□ 0.46
VCX3B-204ENST00000453306 DAGLBQ8NCG7 672 aa17.93■□□□□ 0.46
VCX3B-204ENST00000453306 CUL5Q93034 780 aa17.93■□□□□ 0.46
VCX3B-204ENST00000453306 ZFP91Q96JP5 570 aaPredicted RBP17.93■□□□□ 0.46
VCX3B-204ENST00000453306 C8orf76Q96K31 380 aa17.93■□□□□ 0.46
VCX3B-204ENST00000453306 FAM161BQ96MY7 647 aa17.93■□□□□ 0.46
VCX3B-204ENST00000453306 GUCD1Q96NT3 240 aa17.93■□□□□ 0.46
VCX3B-204ENST00000453306 SPC25Q9HBM1 224 aa17.93■□□□□ 0.46
VCX3B-204ENST00000453306 STARD7Q9NQZ5 370 aa17.93■□□□□ 0.46
VCX3B-204ENST00000453306 ZNFX1Q9P2E3 1918 aaKnown RBP17.93■□□□□ 0.46
VCX3B-204ENST00000453306 DCDC2CA8MYV0 355 aa17.92■□□□□ 0.46
VCX3B-204ENST00000453306 BTBD18B2RXH4 712 aa17.92■□□□□ 0.46
VCX3B-204ENST00000453306 KIF28PB7ZC32 967 aa17.92■□□□□ 0.46
VCX3B-204ENST00000453306 PQBP1O60828 265 aaKnown RBP17.92■□□□□ 0.46
VCX3B-204ENST00000453306 ADAMTS4O75173 837 aa17.92■□□□□ 0.46
VCX3B-204ENST00000453306 DUSP11O75319 330 aaKnown RBP17.92■□□□□ 0.46
VCX3B-204ENST00000453306 SNAI1O95863 264 aaPredicted RBP17.92■□□□□ 0.46
VCX3B-204ENST00000453306 ACLYP53396 1101 aa17.92■□□□□ 0.46
VCX3B-204ENST00000453306 C9orf50Q5SZB4 431 aa17.92■□□□□ 0.46
VCX3B-204ENST00000453306 SAMD3Q8N6K7 520 aa17.92■□□□□ 0.46
VCX3B-204ENST00000453306 CRYGNQ8WXF5 182 aa17.92■□□□□ 0.46
VCX3B-204ENST00000453306 TOX2Q96NM4 488 aa17.92■□□□□ 0.46
VCX3B-204ENST00000453306 MAF1Q9H063 256 aa17.92■□□□□ 0.46
VCX3B-204ENST00000453306 C6orf50Q9HD87 102 aa17.92■□□□□ 0.46
VCX3B-204ENST00000453306 TMEM39AQ9NV64 488 aa17.92■□□□□ 0.46
VCX3B-204ENST00000453306 MAP3K20Q9NYL2 800 aaKnown RBP17.92■□□□□ 0.46
VCX3B-204ENST00000453306 ZHX1Q9UKY1 873 aaPredicted RBP17.92■□□□□ 0.46
VCX3B-204ENST00000453306 PLXNA1Q9UIW2 1896 aa17.91■□□□□ 0.46
VCX3B-204ENST00000453306 KIAA0355O15063 1070 aa17.91■□□□□ 0.46
VCX3B-204ENST00000453306 SYT1P21579 422 aa17.91■□□□□ 0.46
VCX3B-204ENST00000453306 EDNRBP24530 442 aa17.91■□□□□ 0.46
VCX3B-204ENST00000453306 ALDH5A1P51649 535 aaPredicted RBP17.91■□□□□ 0.46
VCX3B-204ENST00000453306 LARP1BQ659C4 914 aaKnown RBP17.91■□□□□ 0.46
VCX3B-204ENST00000453306 ANKRD33Q7Z3H0 272 aa17.91■□□□□ 0.46
VCX3B-204ENST00000453306 PCSK9Q8NBP7 692 aaKnown RBP17.91■□□□□ 0.46
VCX3B-204ENST00000453306 CCDC148Q8NFR7 591 aa17.91■□□□□ 0.46
VCX3B-204ENST00000453306 MORC4Q8TE76 937 aa17.91■□□□□ 0.46
VCX3B-204ENST00000453306 RMDN3Q96TC7 470 aa17.91■□□□□ 0.46
VCX3B-204ENST00000453306 PDCD2LQ9BRP1 358 aa17.91■□□□□ 0.46
VCX3B-204ENST00000453306 KATNBL1Q9H079 304 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms