RNA–Protein interactions for RNA: ENST00000453091.6

RIF1-206, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 8,053 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-206ENST00000453091 SNX24Q9Y343 169 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 SRPRBQ9Y5M8 271 aaKnown RBP8.47□□□□□ -1.05
RIF1-206ENST00000453091 USP6P35125 1406 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 PALMO75781 387 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 PRDX5P30044 214 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 SSTR3P32745 418 aaPredicted RBP8.47□□□□□ -1.05
RIF1-206ENST00000453091 ITIH3Q06033 890 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 RETREG2Q8NC44 543 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 ELAC2Q9BQ52 826 aaKnown RBP8.47□□□□□ -1.05
RIF1-206ENST00000453091 RAB17Q9H0T7 212 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 EHD2Q9NZN4 543 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 BCORL1Q5H9F3 1711 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 POTEMA6NI47 508 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 DDAH1O94760 285 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 MECOMQ03112 1051 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 LRRC14Q15048 493 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 SLFN13Q68D06 897 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 SH2D3CQ8N5H7 860 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 LRRN4CLQ8ND94 238 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 FAM167BQ9BTA0 163 aa8.47□□□□□ -1.05
RIF1-206ENST00000453091 CTNND1O60716 968 aaKnown RBP8.46□□□□□ -1.05
RIF1-206ENST00000453091 PRCPP42785 496 aa8.46□□□□□ -1.05
RIF1-206ENST00000453091 TSNAXIP1Q2TAA8 658 aa8.46□□□□□ -1.05
RIF1-206ENST00000453091 CERKLQ49MI3 558 aaPredicted RBP8.46□□□□□ -1.05
RIF1-206ENST00000453091 CCDC38Q502W7 563 aa8.46□□□□□ -1.05
RIF1-206ENST00000453091 XKR9Q5GH70 373 aa8.46□□□□□ -1.05
RIF1-206ENST00000453091 HP1BP3Q5SSJ5 553 aaPredicted RBP8.46□□□□□ -1.05
RIF1-206ENST00000453091 ANKRD20A3Q5VUR7 823 aa8.46□□□□□ -1.05
RIF1-206ENST00000453091 KRT26Q7Z3Y9 468 aa8.46□□□□□ -1.05
RIF1-206ENST00000453091 TTLL11Q8NHH1 800 aa8.46□□□□□ -1.05
RIF1-206ENST00000453091 CFAP61Q8NHU2 1237 aa8.46□□□□□ -1.05
RIF1-206ENST00000453091 SH3RF3Q8TEJ3 882 aaPredicted RBP8.46□□□□□ -1.05
RIF1-206ENST00000453091 NAP1L4Q99733 375 aaKnown RBP8.46□□□□□ -1.05
RIF1-206ENST00000453091 ARHGEF10LQ9HCE6 1279 aa8.46□□□□□ -1.05
RIF1-206ENST00000453091 TMOD4Q9NZQ9 345 aa8.46□□□□□ -1.05
RIF1-206ENST00000453091 RWDD2AQ9UIY3 292 aa8.46□□□□□ -1.05
RIF1-206ENST00000453091 LRRC53A6NM62 1247 aa8.46□□□□□ -1.05
RIF1-206ENST00000453091 ATF2P15336 505 aa8.46□□□□□ -1.05
RIF1-206ENST00000453091 MYL7Q01449 175 aa8.46□□□□□ -1.05
RIF1-206ENST00000453091 PPP2R5AQ15172 486 aa8.46□□□□□ -1.05
RIF1-206ENST00000453091 TTBK2Q6IQ55 1244 aa8.46□□□□□ -1.05
RIF1-206ENST00000453091 SDCCAG8Q86SQ7 713 aaPredicted RBP8.46□□□□□ -1.05
RIF1-206ENST00000453091 STAG1Q8WVM7 1258 aa8.46□□□□□ -1.05
RIF1-206ENST00000453091 ANO3Q9BYT9 981 aa8.46□□□□□ -1.05
RIF1-206ENST00000453091 PLCB1Q9NQ66 1216 aa8.46□□□□□ -1.05
RIF1-206ENST00000453091 ANAPC4Q9UJX5 808 aa8.46□□□□□ -1.05
RIF1-206ENST00000453091 ERBB3P21860 1342 aa8.46□□□□□ -1.05
RIF1-206ENST00000453091 NR1D1P20393 614 aa8.46□□□□□ -1.05
RIF1-206ENST00000453091 CCDC197Q8NCU1 140 aa8.46□□□□□ -1.05
RIF1-206ENST00000453091 A0A087WUV0 522 aaPredicted RBP8.46□□□□□ -1.06
RIF1-206ENST00000453091 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.46□□□□□ -1.06
RIF1-206ENST00000453091 E9PMD0 336 aa8.46□□□□□ -1.06
RIF1-206ENST00000453091 SMTNP53814 917 aa8.46□□□□□ -1.06
RIF1-206ENST00000453091 N4BP2L2Q92802 583 aaPredicted RBP8.46□□□□□ -1.06
RIF1-206ENST00000453091 CELF1Q92879 486 aaKnown RBP8.46□□□□□ -1.06
RIF1-206ENST00000453091 FERMT1Q9BQL6 677 aa8.46□□□□□ -1.06
RIF1-206ENST00000453091 H0Y3Z8 333 aa8.46□□□□□ -1.06
RIF1-206ENST00000453091 PPEF1O14829 653 aaPredicted RBP8.46□□□□□ -1.06
RIF1-206ENST00000453091 BCRP11274 1271 aa8.46□□□□□ -1.06
RIF1-206ENST00000453091 ARHGAP27Q6ZUM4 889 aa8.46□□□□□ -1.06
RIF1-206ENST00000453091 METTL16Q86W50 562 aaKnown RBP8.46□□□□□ -1.06
RIF1-206ENST00000453091 MB21D2Q8IYB1 491 aaPredicted RBP8.46□□□□□ -1.06
RIF1-206ENST00000453091 CCDC89Q8N998 374 aa8.46□□□□□ -1.06
RIF1-206ENST00000453091 RPGRIP1Q96KN7 1286 aa8.46□□□□□ -1.06
RIF1-206ENST00000453091 MXD3Q9BW11 206 aa8.46□□□□□ -1.06
RIF1-206ENST00000453091 APOL6Q9BWW8 343 aa8.46□□□□□ -1.06
RIF1-206ENST00000453091 ABHD10Q9NUJ1 306 aa8.46□□□□□ -1.06
RIF1-206ENST00000453091 RAB20Q9NX57 234 aa8.46□□□□□ -1.06
RIF1-206ENST00000453091 KDM5DQ9BY66 1539 aa8.46□□□□□ -1.06
RIF1-206ENST00000453091 OPHN1O60890 802 aa8.46□□□□□ -1.06
RIF1-206ENST00000453091 NXNQ6DKJ4 435 aa8.46□□□□□ -1.06
RIF1-206ENST00000453091 METTL13Q8N6R0 699 aa8.46□□□□□ -1.06
RIF1-206ENST00000453091 MIPOL1Q8TD10 442 aa8.46□□□□□ -1.06
RIF1-206ENST00000453091 EXOC4Q96A65 974 aa8.46□□□□□ -1.06
RIF1-206ENST00000453091 EFCC1Q9HA90 598 aa8.46□□□□□ -1.06
RIF1-206ENST00000453091 ZNF148Q9UQR1 794 aa8.46□□□□□ -1.06
RIF1-206ENST00000453091 FCER1AP12319 257 aa8.46□□□□□ -1.06
RIF1-206ENST00000453091 ICA1Q05084 483 aa8.46□□□□□ -1.06
RIF1-206ENST00000453091 BRINP3Q76B58 766 aa8.46□□□□□ -1.06
RIF1-206ENST00000453091 AZI2Q9H6S1 392 aa8.46□□□□□ -1.06
RIF1-206ENST00000453091 ATG3Q9NT62 314 aa8.46□□□□□ -1.06
RIF1-206ENST00000453091 ADGRG1Q9Y653 693 aa8.46□□□□□ -1.06
RIF1-206ENST00000453091 F5H423 210 aaPredicted RBP8.45□□□□□ -1.06
RIF1-206ENST00000453091 DAPK3O43293 454 aa8.45□□□□□ -1.06
RIF1-206ENST00000453091 GADL1Q6ZQY3 521 aa8.45□□□□□ -1.06
RIF1-206ENST00000453091 OR2W6PQ8NHA6 318 aa8.45□□□□□ -1.06
RIF1-206ENST00000453091 ATP8A2Q9NTI2 1148 aa8.45□□□□□ -1.06
RIF1-206ENST00000453091 SPATA24Q86W54 205 aa8.45□□□□□ -1.06
RIF1-206ENST00000453091 SREK1Q8WXA9 508 aaKnown RBP8.45□□□□□ -1.06
RIF1-206ENST00000453091 ANKFY1Q9P2R3 1169 aa8.45□□□□□ -1.06
RIF1-206ENST00000453091 MORC2Q9Y6X9 1032 aaPredicted RBP8.45□□□□□ -1.06
RIF1-206ENST00000453091 ZBED4O75132 1171 aa8.45□□□□□ -1.06
RIF1-206ENST00000453091 TMOD1P28289 359 aa8.45□□□□□ -1.06
RIF1-206ENST00000453091 MRPS9P82933 396 aaKnown RBP8.45□□□□□ -1.06
RIF1-206ENST00000453091 NCAPG2Q86XI2 1143 aa8.45□□□□□ -1.06
RIF1-206ENST00000453091 TEKT1Q969V4 418 aa8.45□□□□□ -1.06
RIF1-206ENST00000453091 CCDC151A5D8V7 595 aa8.45□□□□□ -1.06
RIF1-206ENST00000453091 GAS8O95995 478 aa8.45□□□□□ -1.06
RIF1-206ENST00000453091 KLK7P49862 253 aa8.45□□□□□ -1.06
RIF1-206ENST00000453091 USP49Q70CQ1 688 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms