RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 SKIV2LQ15477 1246 aaKnown RBP13.63□□□□□ -0.23
GARNL3-210ENST00000453030 IMMTQ16891 758 aaKnown RBP13.63□□□□□ -0.23
GARNL3-210ENST00000453030 CCDC178Q5BJE1 867 aa13.63□□□□□ -0.23
GARNL3-210ENST00000453030 ARHGEF16Q5VV41 709 aa13.63□□□□□ -0.23
GARNL3-210ENST00000453030 GDF6Q6KF10 455 aaPredicted RBP13.63□□□□□ -0.23
GARNL3-210ENST00000453030 FBXO11Q86XK2 927 aa13.63□□□□□ -0.23
GARNL3-210ENST00000453030 NSUN6Q8TEA1 469 aaKnown RBP13.63□□□□□ -0.23
GARNL3-210ENST00000453030 YTHDC1Q96MU7 727 aaKnown RBP13.63□□□□□ -0.23
GARNL3-210ENST00000453030 UBAC1Q9BSL1 405 aa13.63□□□□□ -0.23
GARNL3-210ENST00000453030 OSBPL3Q9H4L5 887 aa13.63□□□□□ -0.23
GARNL3-210ENST00000453030 EPOPA6NHQ4 379 aa13.62□□□□□ -0.23
GARNL3-210ENST00000453030 RBAK-RBAKDNI3L0D1 243 aa13.62□□□□□ -0.23
GARNL3-210ENST00000453030 ARHGEF15O94989 841 aa13.62□□□□□ -0.23
GARNL3-210ENST00000453030 CFBP00751 764 aa13.62□□□□□ -0.23
GARNL3-210ENST00000453030 IGHDP01880 384 aa13.62□□□□□ -0.23
GARNL3-210ENST00000453030 ZNF286BP0CG31 522 aa13.62□□□□□ -0.23
GARNL3-210ENST00000453030 TFF2Q03403 129 aa13.62□□□□□ -0.23
GARNL3-210ENST00000453030 STXBP2Q15833 593 aa13.62□□□□□ -0.23
GARNL3-210ENST00000453030 MCF2L2Q86YR7 1114 aa13.62□□□□□ -0.23
GARNL3-210ENST00000453030 CCDC155Q8N6L0 562 aa13.62□□□□□ -0.23
GARNL3-210ENST00000453030 ARNTL2Q8WYA1 636 aa13.62□□□□□ -0.23
GARNL3-210ENST00000453030 UHRF1Q96T88 793 aaPredicted RBP13.62□□□□□ -0.23
GARNL3-210ENST00000453030 DSCC1Q9BVC3 393 aa13.62□□□□□ -0.23
GARNL3-210ENST00000453030 TSPYL2Q9H2G4 693 aaPredicted RBP13.62□□□□□ -0.23
GARNL3-210ENST00000453030 JMJD4Q9H9V9 463 aa13.62□□□□□ -0.23
GARNL3-210ENST00000453030 ZSWIM5Q9P217 1185 aa13.62□□□□□ -0.23
GARNL3-210ENST00000453030 MRPL11Q9Y3B7 192 aaKnown RBP13.62□□□□□ -0.23
GARNL3-210ENST00000453030 MRVI1Q9Y6F6 885 aa13.62□□□□□ -0.23
GARNL3-210ENST00000453030 HIP1O00291 1037 aa13.61□□□□□ -0.23
GARNL3-210ENST00000453030 GTPBP6O43824 516 aaPredicted RBP13.61□□□□□ -0.23
GARNL3-210ENST00000453030 SORBS3O60504 671 aa13.61□□□□□ -0.23
GARNL3-210ENST00000453030 KCNJ6P48051 423 aa13.61□□□□□ -0.23
GARNL3-210ENST00000453030 NT5C2P49902 561 aa13.61□□□□□ -0.23
GARNL3-210ENST00000453030 IFIT1BQ5T764 474 aaKnown RBP13.61□□□□□ -0.23
GARNL3-210ENST00000453030 KRT40Q6A162 431 aa13.61□□□□□ -0.23
GARNL3-210ENST00000453030 SPRED2Q7Z698 418 aa13.61□□□□□ -0.23
GARNL3-210ENST00000453030 TMCO2Q7Z6W1 182 aaPredicted RBP13.61□□□□□ -0.23
GARNL3-210ENST00000453030 HERC6Q8IVU3 1022 aa13.61□□□□□ -0.23
GARNL3-210ENST00000453030 STAG2Q8N3U4 1231 aa13.61□□□□□ -0.23
GARNL3-210ENST00000453030 CAGE1Q8TC20 777 aa13.61□□□□□ -0.23
GARNL3-210ENST00000453030 AFAP1L1Q8TED9 768 aa13.61□□□□□ -0.23
GARNL3-210ENST00000453030 DHX38Q92620 1227 aaKnown RBP13.61□□□□□ -0.23
GARNL3-210ENST00000453030 ANKS1AQ92625 1134 aa13.61□□□□□ -0.23
GARNL3-210ENST00000453030 KAT2BQ92831 832 aa13.61□□□□□ -0.23
GARNL3-210ENST00000453030 CTAGE1Q96RT6 745 aa13.61□□□□□ -0.23
GARNL3-210ENST00000453030 IWS1Q96ST2 819 aa13.61□□□□□ -0.23
GARNL3-210ENST00000453030 KRT23Q9C075 422 aa13.61□□□□□ -0.23
GARNL3-210ENST00000453030 IL25Q9H293 177 aa13.61□□□□□ -0.23
GARNL3-210ENST00000453030 PXMP2Q9NR77 195 aa13.61□□□□□ -0.23
GARNL3-210ENST00000453030 KAT6AQ92794 2004 aa13.61□□□□□ -0.23
GARNL3-210ENST00000453030 OPLAHO14841 1288 aa13.6□□□□□ -0.23
GARNL3-210ENST00000453030 BAIAP3O94812 1187 aa13.6□□□□□ -0.23
GARNL3-210ENST00000453030 CASTP20810 708 aaKnown RBP13.6□□□□□ -0.23
GARNL3-210ENST00000453030 TAP1Q03518 808 aa13.6□□□□□ -0.23
GARNL3-210ENST00000453030 AAMPQ13685 434 aa13.6□□□□□ -0.23
GARNL3-210ENST00000453030 DGKDQ16760 1214 aa13.6□□□□□ -0.23
GARNL3-210ENST00000453030 LRRC8DQ7L1W4 858 aa13.6□□□□□ -0.23
GARNL3-210ENST00000453030 SESTD1Q86VW0 696 aa13.6□□□□□ -0.23
GARNL3-210ENST00000453030 EXOC6Q8TAG9 804 aa13.6□□□□□ -0.23
GARNL3-210ENST00000453030 PHOSPHO2Q8TCD6 241 aa13.6□□□□□ -0.23
GARNL3-210ENST00000453030 NECAB3Q96P71 396 aaPredicted RBP13.6□□□□□ -0.23
GARNL3-210ENST00000453030 ALG1Q9BT22 464 aa13.6□□□□□ -0.23
GARNL3-210ENST00000453030 CNNM2Q9H8M5 875 aa13.6□□□□□ -0.23
GARNL3-210ENST00000453030 DDX41Q9UJV9 622 aaKnown RBP13.6□□□□□ -0.23
GARNL3-210ENST00000453030 MTCH2Q9Y6C9 303 aa13.6□□□□□ -0.23
GARNL3-210ENST00000453030 NLRC5Q86WI3 1866 aa13.59□□□□□ -0.23
GARNL3-210ENST00000453030 KIF28PB7ZC32 967 aa13.59□□□□□ -0.23
GARNL3-210ENST00000453030 TLL1O43897 1013 aa13.59□□□□□ -0.23
GARNL3-210ENST00000453030 PPP1R11O60927 126 aaPredicted RBP13.59□□□□□ -0.23
GARNL3-210ENST00000453030 NR3C2P08235 984 aa13.59□□□□□ -0.23
GARNL3-210ENST00000453030 MYCLP12524 364 aaPredicted RBP13.59□□□□□ -0.23
GARNL3-210ENST00000453030 SELPP16109 830 aa13.59□□□□□ -0.23
GARNL3-210ENST00000453030 PSEN2P49810 448 aa13.59□□□□□ -0.23
GARNL3-210ENST00000453030 WDR5P61964 334 aaKnown RBP13.59□□□□□ -0.23
GARNL3-210ENST00000453030 DEFB103AP81534 67 aa13.59□□□□□ -0.23
GARNL3-210ENST00000453030 HOMER1Q86YM7 354 aa13.59□□□□□ -0.23
GARNL3-210ENST00000453030 C7orf31Q8N865 590 aa13.59□□□□□ -0.23
GARNL3-210ENST00000453030 AMNQ9BXJ7 453 aa13.59□□□□□ -0.23
GARNL3-210ENST00000453030 MAF1Q9H063 256 aa13.59□□□□□ -0.23
GARNL3-210ENST00000453030 HDAC6Q9UBN7 1215 aa13.59□□□□□ -0.23
GARNL3-210ENST00000453030 GTF2IRD1Q9UHL9 959 aa13.59□□□□□ -0.23
GARNL3-210ENST00000453030 CTNNA3Q9UI47 895 aa13.59□□□□□ -0.23
GARNL3-210ENST00000453030 LCHNA4D1U4 455 aa13.58□□□□□ -0.24
GARNL3-210ENST00000453030 KLRF2D3W0D1 207 aa13.58□□□□□ -0.24
GARNL3-210ENST00000453030 EIF3JO75822 258 aaKnown RBP13.58□□□□□ -0.24
GARNL3-210ENST00000453030 F2P00734 622 aa13.58□□□□□ -0.24
GARNL3-210ENST00000453030 CKBP12277 381 aa13.58□□□□□ -0.24
GARNL3-210ENST00000453030 HOXA13P31271 388 aaPredicted RBP13.58□□□□□ -0.24
GARNL3-210ENST00000453030 HSD17B4P51659 736 aa13.58□□□□□ -0.24
GARNL3-210ENST00000453030 KCNQ1P51787 676 aa13.58□□□□□ -0.24
GARNL3-210ENST00000453030 MFSD10Q14728 455 aa13.58□□□□□ -0.24
GARNL3-210ENST00000453030 GPNMBQ14956 572 aa13.58□□□□□ -0.24
GARNL3-210ENST00000453030 KIAA0753Q2KHM9 967 aa13.58□□□□□ -0.24
GARNL3-210ENST00000453030 CYB5R4Q7L1T6 521 aa13.58□□□□□ -0.24
GARNL3-210ENST00000453030 DHX37Q8IY37 1157 aaKnown RBP13.58□□□□□ -0.24
GARNL3-210ENST00000453030 IL31RAQ8NI17 732 aa13.58□□□□□ -0.24
GARNL3-210ENST00000453030 PPTC7Q8NI37 304 aa13.58□□□□□ -0.24
GARNL3-210ENST00000453030 EMID1Q96A84 441 aaPredicted RBP13.58□□□□□ -0.24
GARNL3-210ENST00000453030 PDCD2LQ9BRP1 358 aa13.58□□□□□ -0.24
GARNL3-210ENST00000453030 KATNAL1Q9BW62 490 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms