RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 TXLNGQ9NUQ3 528 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 GALNT8Q9NY28 637 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 AATFQ9NY61 560 aaKnown RBP eCLIP9.19□□□□□ -0.94
SMCO1-202ENST00000452776 NDUFA13Q9P0J0 144 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 ADAM22Q9P0K1 906 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 MAGEC2Q9UBF1 373 aaPredicted RBP9.19□□□□□ -0.94
SMCO1-202ENST00000452776 TRIM10Q9UDY6 481 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 G3BP2Q9UN86 482 aaKnown RBP9.19□□□□□ -0.94
SMCO1-202ENST00000452776 NOVA2Q9UNW9 492 aaKnown RBP9.19□□□□□ -0.94
SMCO1-202ENST00000452776 LRCH1Q9Y2L9 728 aa9.19□□□□□ -0.94
SMCO1-202ENST00000452776 NRKQ7Z2Y5 1582 aa9.18□□□□□ -0.94
SMCO1-202ENST00000452776 M0R2C6 588 aa9.18□□□□□ -0.94
SMCO1-202ENST00000452776 IGF2BP3O00425 579 aaKnown RBP eCLIP9.18□□□□□ -0.94
SMCO1-202ENST00000452776 PJA2O43164 708 aa9.18□□□□□ -0.94
SMCO1-202ENST00000452776 FAM200BP0CF97 657 aa9.18□□□□□ -0.94
SMCO1-202ENST00000452776 RARAP10276 462 aa9.18□□□□□ -0.94
SMCO1-202ENST00000452776 RPL13P26373 211 aaKnown RBP9.18□□□□□ -0.94
SMCO1-202ENST00000452776 GJA8P48165 433 aa9.18□□□□□ -0.94
SMCO1-202ENST00000452776 VASPP50552 380 aaPredicted RBP9.18□□□□□ -0.94
SMCO1-202ENST00000452776 NCALDP61601 193 aa9.18□□□□□ -0.94
SMCO1-202ENST00000452776 MKRN3Q13064 507 aaKnown RBP9.18□□□□□ -0.94
SMCO1-202ENST00000452776 PAK1Q13153 545 aa9.18□□□□□ -0.94
SMCO1-202ENST00000452776 EZH2Q15910 746 aaKnown RBP9.18□□□□□ -0.94
SMCO1-202ENST00000452776 KBTBD12Q3ZCT8 623 aa9.18□□□□□ -0.94
SMCO1-202ENST00000452776 STOX1Q6ZVD7 989 aa9.18□□□□□ -0.94
SMCO1-202ENST00000452776 ARMCX6Q7L4S7 300 aa9.18□□□□□ -0.94
SMCO1-202ENST00000452776 SMYD1Q8NB12 490 aa9.18□□□□□ -0.94
SMCO1-202ENST00000452776 ATP8B4Q8TF62 1192 aa9.18□□□□□ -0.94
SMCO1-202ENST00000452776 STK32AQ8WU08 396 aa9.18□□□□□ -0.94
SMCO1-202ENST00000452776 RSPH1Q8WYR4 309 aa9.18□□□□□ -0.94
SMCO1-202ENST00000452776 ZNF653Q96CK0 615 aa9.18□□□□□ -0.94
SMCO1-202ENST00000452776 TLCD1Q96CP7 247 aa9.18□□□□□ -0.94
SMCO1-202ENST00000452776 TMEM237Q96Q45 408 aa9.18□□□□□ -0.94
SMCO1-202ENST00000452776 SMC6Q96SB8 1091 aa9.18□□□□□ -0.94
SMCO1-202ENST00000452776 HAUS7Q99871 368 aa9.18□□□□□ -0.94
SMCO1-202ENST00000452776 CCDC8Q9H0W5 538 aaPredicted RBP9.18□□□□□ -0.94
SMCO1-202ENST00000452776 VPS16Q9H269 839 aa9.18□□□□□ -0.94
SMCO1-202ENST00000452776 PCDH18Q9HCL0 1135 aa9.18□□□□□ -0.94
SMCO1-202ENST00000452776 MIS18AQ9NYP9 233 aa9.18□□□□□ -0.94
SMCO1-202ENST00000452776 STOML1Q9UBI4 398 aa9.18□□□□□ -0.94
SMCO1-202ENST00000452776 ZNF148Q9UQR1 794 aa9.18□□□□□ -0.94
SMCO1-202ENST00000452776 USP15Q9Y4E8 981 aaPredicted RBP9.18□□□□□ -0.94
SMCO1-202ENST00000452776 MLH3Q9UHC1 1453 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 KLF18A0A0U1RQI7 1052 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 PALM3A6NDB9 673 aaPredicted RBP9.17□□□□□ -0.94
SMCO1-202ENST00000452776 CCDC169A6NNP5 214 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 GOLGA8BA8MQT2 603 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 GNAT3A8MTJ3 354 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 PFDN1O60925 122 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 CHGBP05060 677 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 GLI1P08151 1106 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 TMOD1P28289 359 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 HNRNPH3P31942 346 aaKnown RBP9.17□□□□□ -0.94
SMCO1-202ENST00000452776 MAGOHP61326 146 aaKnown RBP9.17□□□□□ -0.94
SMCO1-202ENST00000452776 ZNF844Q08AG5 666 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 TEFQ10587 303 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 TRIM68Q6AZZ1 485 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 OTUD7BQ6GQQ9 843 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 SEPT14Q6ZU15 432 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 ASRGL1Q7L266 308 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 SYCP3Q8IZU3 236 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 KBTBD3Q8NAB2 608 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 ZBTB8BQ8NAP8 495 aaPredicted RBP9.17□□□□□ -0.94
SMCO1-202ENST00000452776 MAGOHBQ96A72 148 aaKnown RBP9.17□□□□□ -0.94
SMCO1-202ENST00000452776 GRAMD1AQ96CP6 724 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 PGM2Q96G03 612 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 OLFM3Q96PB7 478 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 NR1H4Q96RI1 486 aaPredicted RBP9.17□□□□□ -0.94
SMCO1-202ENST00000452776 NAP1L3Q99457 506 aaPredicted RBP9.17□□□□□ -0.94
SMCO1-202ENST00000452776 SYT15Q9BQS2 421 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 FOXP1Q9H334 677 aaPredicted RBP9.17□□□□□ -0.94
SMCO1-202ENST00000452776 RXFP1Q9HBX9 757 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 EXOC1Q9NV70 894 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 DLGAP2Q9P1A6 1054 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 FBXO2Q9UK22 296 aaPredicted RBP9.17□□□□□ -0.94
SMCO1-202ENST00000452776 PCDHA13Q9Y5I0 950 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 MACROD2A1Z1Q3 448 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 HNRNPCL1O60812 293 aaKnown RBP9.17□□□□□ -0.94
SMCO1-202ENST00000452776 ATP6V1G1O75348 118 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 FAM153BP0C7A2 387 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 MYBP10242 640 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 CCT6AP40227 531 aaKnown RBP9.17□□□□□ -0.94
SMCO1-202ENST00000452776 PPP1R2P41236 205 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 STAT6P42226 847 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 GUCY2FP51841 1108 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 MMRN1Q13201 1228 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 PPP2R5EQ16537 467 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 FAM153CQ494X1 144 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 FAM133BQ5BKY9 247 aaKnown RBP9.17□□□□□ -0.94
SMCO1-202ENST00000452776 C6orf118Q5T5N4 469 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 OR52E8Q6IFG1 317 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 KLHL10Q6JEL2 608 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 WDR59Q6PJI9 974 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 CADPS2Q86UW7 1296 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 NOSTRINQ8IVI9 506 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 NCOA7Q8NI08 942 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 PIGOQ8TEQ8 1089 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 CASKIN2Q8WXE0 1202 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 FERMT2Q96AC1 680 aa9.17□□□□□ -0.94
SMCO1-202ENST00000452776 IFT43Q96FT9 208 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms