RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 ECEL1O95672 775 aa20.51■□□□□ 0.87
PTPA-223ENST00000452489 CUL3Q13618 768 aa20.51■□□□□ 0.87
PTPA-223ENST00000452489 KRT71Q3SY84 523 aa20.51■□□□□ 0.87
PTPA-223ENST00000452489 ZNF658Q5TYW1 1059 aaPredicted RBP20.51■□□□□ 0.87
PTPA-223ENST00000452489 PSMD1Q99460 953 aa20.51■□□□□ 0.87
PTPA-223ENST00000452489 ALDH3A1P30838 453 aa20.5■□□□□ 0.87
PTPA-223ENST00000452489 DNM2P50570 870 aa20.5■□□□□ 0.87
PTPA-223ENST00000452489 SCNN1BP51168 640 aa20.5■□□□□ 0.87
PTPA-223ENST00000452489 CCNG1P51959 295 aa20.5■□□□□ 0.87
PTPA-223ENST00000452489 SLC39A6Q13433 755 aa20.5■□□□□ 0.87
PTPA-223ENST00000452489 LRRC23Q53EV4 343 aaPredicted RBP20.5■□□□□ 0.87
PTPA-223ENST00000452489 MPRIPQ6WCQ1 1025 aa20.5■□□□□ 0.87
PTPA-223ENST00000452489 TMC4Q7Z404 712 aa20.5■□□□□ 0.87
PTPA-223ENST00000452489 LPIN2Q92539 896 aa20.5■□□□□ 0.87
PTPA-223ENST00000452489 EXOC1Q9NV70 894 aa20.5■□□□□ 0.87
PTPA-223ENST00000452489 PNMA2Q9UL42 364 aa20.5■□□□□ 0.87
PTPA-223ENST00000452489 NPTXRO95502 500 aa20.5■□□□□ 0.87
PTPA-223ENST00000452489 HOXC9P31274 260 aa20.5■□□□□ 0.87
PTPA-223ENST00000452489 EIF4A3P38919 411 aaKnown RBP20.5■□□□□ 0.87
PTPA-223ENST00000452489 C2CD5Q86YS7 1000 aa20.5■□□□□ 0.87
PTPA-223ENST00000452489 ATL2Q8NHH9 583 aa20.5■□□□□ 0.87
PTPA-223ENST00000452489 ISCUQ9H1K1 167 aa20.5■□□□□ 0.87
PTPA-223ENST00000452489 ZMYND8Q9ULU4 1186 aaPredicted RBP20.5■□□□□ 0.87
PTPA-223ENST00000452489 PACSIN2Q9UNF0 486 aaPredicted RBP20.5■□□□□ 0.87
PTPA-223ENST00000452489 ZSCAN9O15535 394 aaPredicted RBP20.49■□□□□ 0.87
PTPA-223ENST00000452489 ASAP2O43150 1006 aa20.49■□□□□ 0.87
PTPA-223ENST00000452489 SHBGP04278 402 aa20.49■□□□□ 0.87
PTPA-223ENST00000452489 MMEP08473 750 aa20.49■□□□□ 0.87
PTPA-223ENST00000452489 CHN1P15882 459 aa20.49■□□□□ 0.87
PTPA-223ENST00000452489 RNF220Q5VTB9 566 aa20.49■□□□□ 0.87
PTPA-223ENST00000452489 FTCDO95954 541 aa20.49■□□□□ 0.87
PTPA-223ENST00000452489 IMPDH2P12268 514 aa20.49■□□□□ 0.87
PTPA-223ENST00000452489 POLE2P56282 527 aa20.49■□□□□ 0.87
PTPA-223ENST00000452489 EARS2Q5JPH6 523 aaKnown RBP20.49■□□□□ 0.87
PTPA-223ENST00000452489 KLHL29Q96CT2 875 aa20.49■□□□□ 0.87
PTPA-223ENST00000452489 UBE2OQ9C0C9 1292 aaKnown RBP20.49■□□□□ 0.87
PTPA-223ENST00000452489 INCENPQ9NQS7 918 aa20.49■□□□□ 0.87
PTPA-223ENST00000452489 ANKIB1Q9P2G1 1089 aa20.49■□□□□ 0.87
PTPA-223ENST00000452489 TRIM33Q9UPN9 1127 aa20.49■□□□□ 0.87
PTPA-223ENST00000452489 EEF1GP26641 437 aaKnown RBP20.48■□□□□ 0.87
PTPA-223ENST00000452489 MSH2P43246 934 aa20.48■□□□□ 0.87
PTPA-223ENST00000452489 RASSF7Q02833 373 aa20.48■□□□□ 0.87
PTPA-223ENST00000452489 NEXNQ0ZGT2 675 aa20.48■□□□□ 0.87
PTPA-223ENST00000452489 LRRC45Q96CN5 670 aa20.48■□□□□ 0.87
PTPA-223ENST00000452489 TUBGCP2Q9BSJ2 902 aa20.48■□□□□ 0.87
PTPA-223ENST00000452489 SAMD15Q9P1V8 674 aa20.48■□□□□ 0.87
PTPA-223ENST00000452489 NKX1-2Q9UD57 310 aaPredicted RBP20.48■□□□□ 0.87
PTPA-223ENST00000452489 TRIM75PA6NK02 468 aa20.48■□□□□ 0.87
PTPA-223ENST00000452489 CNGA1P29973 690 aa20.48■□□□□ 0.87
PTPA-223ENST00000452489 RPS6KC1Q96S38 1066 aa20.48■□□□□ 0.87
PTPA-223ENST00000452489 NKRFO15226 690 aaKnown RBP eCLIP20.47■□□□□ 0.872e-6■■□□□ 12.4
PTPA-223ENST00000452489 SART1O43290 800 aaKnown RBP20.47■□□□□ 0.87
PTPA-223ENST00000452489 AKR1B10O60218 316 aa20.47■□□□□ 0.87
PTPA-223ENST00000452489 MYBP10242 640 aa20.47■□□□□ 0.87
PTPA-223ENST00000452489 TRIM47Q96LD4 638 aa20.47■□□□□ 0.87
PTPA-223ENST00000452489 PLEKHG4BQ96PX9 1271 aa20.47■□□□□ 0.87
PTPA-223ENST00000452489 LY9Q9HBG7 655 aa20.47■□□□□ 0.87
PTPA-223ENST00000452489 CD2APQ9Y5K6 639 aa20.47■□□□□ 0.87
PTPA-223ENST00000452489 RPN1P04843 607 aaKnown RBP20.47■□□□□ 0.87
PTPA-223ENST00000452489 MYL6BP14649 208 aa20.47■□□□□ 0.87
PTPA-223ENST00000452489 PCK1P35558 622 aa20.47■□□□□ 0.87
PTPA-223ENST00000452489 MAGEA1P43355 309 aa20.47■□□□□ 0.87
PTPA-223ENST00000452489 MAGEA8P43361 318 aa20.47■□□□□ 0.87
PTPA-223ENST00000452489 CDK17Q00537 523 aa20.47■□□□□ 0.87
PTPA-223ENST00000452489 IGDCC4Q8TDY8 1250 aa20.47■□□□□ 0.87
PTPA-223ENST00000452489 SELENOSQ9BQE4 189 aa20.47■□□□□ 0.87
PTPA-223ENST00000452489 NEO1Q92859 1461 aa20.46■□□□□ 0.87
PTPA-223ENST00000452489 MTA1Q13330 715 aa20.46■□□□□ 0.87
PTPA-223ENST00000452489 SEPT2Q15019 361 aa20.46■□□□□ 0.87
PTPA-223ENST00000452489 PDXDC2PQ6P474 469 aa20.46■□□□□ 0.87
PTPA-223ENST00000452489 TMEM154Q6P9G4 183 aa20.46■□□□□ 0.87
PTPA-223ENST00000452489 CADPS2Q86UW7 1296 aa20.46■□□□□ 0.87
PTPA-223ENST00000452489 CCDC155Q8N6L0 562 aa20.46■□□□□ 0.87
PTPA-223ENST00000452489 ATXN2LQ8WWM7 1075 aaKnown RBP20.46■□□□□ 0.87
PTPA-223ENST00000452489 NOX5Q96PH1 765 aa20.46■□□□□ 0.87
PTPA-223ENST00000452489 CNOT10Q9H9A5 744 aaKnown RBP20.46■□□□□ 0.87
PTPA-223ENST00000452489 MAGEC2Q9UBF1 373 aaPredicted RBP20.46■□□□□ 0.87
PTPA-223ENST00000452489 PCDHGA4Q9Y5G9 962 aa20.46■□□□□ 0.87
PTPA-223ENST00000452489 MRPS35P82673 323 aaKnown RBP20.46■□□□□ 0.87
PTPA-223ENST00000452489 PDIA6Q15084 440 aa20.46■□□□□ 0.87
PTPA-223ENST00000452489 CCDC57Q2TAC2 916 aa20.46■□□□□ 0.87
PTPA-223ENST00000452489 TMEM67Q5HYA8 995 aa20.46■□□□□ 0.87
PTPA-223ENST00000452489 SLC17A8Q8NDX2 589 aa20.46■□□□□ 0.87
PTPA-223ENST00000452489 TBC1D2BQ9UPU7 963 aa20.46■□□□□ 0.87
PTPA-223ENST00000452489 PLEKHG3A1L390 1219 aa20.45■□□□□ 0.86
PTPA-223ENST00000452489 EPHB6O15197 1021 aa20.45■□□□□ 0.86
PTPA-223ENST00000452489 GPAA1O43292 621 aa20.45■□□□□ 0.86
PTPA-223ENST00000452489 GTPBP6O43824 516 aaPredicted RBP20.45■□□□□ 0.86
PTPA-223ENST00000452489 VIMP08670 466 aaKnown RBP20.45■□□□□ 0.86
PTPA-223ENST00000452489 RFC5P40937 340 aa20.45■□□□□ 0.86
PTPA-223ENST00000452489 ATP11AP98196 1134 aa20.45■□□□□ 0.86
PTPA-223ENST00000452489 ADSSL1Q8N142 457 aa20.45■□□□□ 0.86
PTPA-223ENST00000452489 RETREG2Q8NC44 543 aa20.45■□□□□ 0.86
PTPA-223ENST00000452489 PHC3Q8NDX5 983 aa20.45■□□□□ 0.86
PTPA-223ENST00000452489 WASF1Q92558 559 aa20.45■□□□□ 0.86
PTPA-223ENST00000452489 CENPTQ96BT3 561 aa20.45■□□□□ 0.86
PTPA-223ENST00000452489 INPP4AQ96PE3 977 aaPredicted RBP20.45■□□□□ 0.86
PTPA-223ENST00000452489 OCEL1Q9H607 264 aa20.45■□□□□ 0.86
PTPA-223ENST00000452489 TMEM165Q9HC07 324 aa20.45■□□□□ 0.86
PTPA-223ENST00000452489 RNF14Q9UBS8 474 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms