RNA–Protein interactions for RNA: ENST00000451964.5

CSNK1E-211, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 873 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-211ENST00000451964 TRPV6Q9H1D0 765 aa14.27□□□□□ -0.13
CSNK1E-211ENST00000451964 FAM217BQ9NTX9 383 aaPredicted RBP14.27□□□□□ -0.13
CSNK1E-211ENST00000451964 MROH7Q68CQ1 1323 aa14.26□□□□□ -0.13
CSNK1E-211ENST00000451964 MEIS2O14770 477 aa14.26□□□□□ -0.13
CSNK1E-211ENST00000451964 TIMP1P01033 207 aa14.26□□□□□ -0.13
CSNK1E-211ENST00000451964 PPP1R13LQ8WUF5 828 aa14.26□□□□□ -0.13
CSNK1E-211ENST00000451964 AFG1LQ8WV93 481 aa14.26□□□□□ -0.13
CSNK1E-211ENST00000451964 JAKMIP1Q96N16 626 aaKnown RBP14.26□□□□□ -0.13
CSNK1E-211ENST00000451964 POLR3EQ9NVU0 708 aa14.26□□□□□ -0.13
CSNK1E-211ENST00000451964 SEC63Q9UGP8 760 aaKnown RBP14.26□□□□□ -0.13
CSNK1E-211ENST00000451964 KLF18A0A0U1RQI7 1052 aa14.25□□□□□ -0.13
CSNK1E-211ENST00000451964 ZBTB43O43298 467 aa14.25□□□□□ -0.13
CSNK1E-211ENST00000451964 REC8O95072 547 aa14.25□□□□□ -0.13
CSNK1E-211ENST00000451964 GH1P01241 217 aa14.25□□□□□ -0.13
CSNK1E-211ENST00000451964 HMGB1P09429 215 aaKnown RBP14.25□□□□□ -0.13
CSNK1E-211ENST00000451964 MRPS9P82933 396 aaKnown RBP14.25□□□□□ -0.13
CSNK1E-211ENST00000451964 SP2Q02086 613 aa14.25□□□□□ -0.13
CSNK1E-211ENST00000451964 SYNE3Q6ZMZ3 975 aa14.25□□□□□ -0.13
CSNK1E-211ENST00000451964 GPKOWQ92917 476 aaPredicted RBP eCLIP14.25□□□□□ -0.13
CSNK1E-211ENST00000451964 MTG1Q9BT17 334 aaPredicted RBP14.25□□□□□ -0.13
CSNK1E-211ENST00000451964 ALDH8A1Q9H2A2 487 aaPredicted RBP14.25□□□□□ -0.13
CSNK1E-211ENST00000451964 MRVI1Q9Y6F6 885 aa14.25□□□□□ -0.13
CSNK1E-211ENST00000451964 LAMA2P24043 3122 aaKnown RBP14.24□□□□□ -0.13
CSNK1E-211ENST00000451964 FRMPD4Q14CM0 1322 aa14.24□□□□□ -0.13
CSNK1E-211ENST00000451964 PIK3CDO00329 1044 aa14.24□□□□□ -0.13
CSNK1E-211ENST00000451964 TLR3O15455 904 aaKnown RBP14.24□□□□□ -0.13
CSNK1E-211ENST00000451964 B4GALT4O60513 344 aa14.24□□□□□ -0.13
CSNK1E-211ENST00000451964 MMP3P08254 477 aa14.24□□□□□ -0.13
CSNK1E-211ENST00000451964 CDC27P30260 824 aa14.24□□□□□ -0.13
CSNK1E-211ENST00000451964 CCND2P30279 289 aa14.24□□□□□ -0.13
CSNK1E-211ENST00000451964 RTN1Q16799 776 aa14.24□□□□□ -0.13
CSNK1E-211ENST00000451964 NBPF20Q3BBV1 942 aa14.24□□□□□ -0.13
CSNK1E-211ENST00000451964 BRDTQ58F21 947 aaPredicted RBP14.24□□□□□ -0.13
CSNK1E-211ENST00000451964 MFSD5Q6N075 450 aa14.24□□□□□ -0.13
CSNK1E-211ENST00000451964 Q6ZUG5 572 aa14.24□□□□□ -0.13
CSNK1E-211ENST00000451964 C16orf59Q7L2K0 433 aa14.24□□□□□ -0.13
CSNK1E-211ENST00000451964 KAT2BQ92831 832 aa14.24□□□□□ -0.13
CSNK1E-211ENST00000451964 EMID1Q96A84 441 aaPredicted RBP14.24□□□□□ -0.13
CSNK1E-211ENST00000451964 USP26Q9BXU7 913 aa14.24□□□□□ -0.13
CSNK1E-211ENST00000451964 PPP1R12CQ9BZL4 782 aa14.24□□□□□ -0.13
CSNK1E-211ENST00000451964 BCAS3Q9H6U6 928 aa14.24□□□□□ -0.13
CSNK1E-211ENST00000451964 TRMT13Q9NUP7 481 aaKnown RBP14.24□□□□□ -0.13
CSNK1E-211ENST00000451964 UMODL1Q5DID0 1318 aa14.23□□□□□ -0.13
CSNK1E-211ENST00000451964 CNTNAP5Q8WYK1 1306 aa14.23□□□□□ -0.13
CSNK1E-211ENST00000451964 SORBS3O60504 671 aa14.23□□□□□ -0.13
CSNK1E-211ENST00000451964 KPNA6O60684 536 aa14.23□□□□□ -0.13
CSNK1E-211ENST00000451964 RPS6KB1P23443 525 aa14.23□□□□□ -0.13
CSNK1E-211ENST00000451964 CYP2C18P33260 490 aa14.23□□□□□ -0.13
CSNK1E-211ENST00000451964 ADD1P35611 737 aaKnown RBP14.23□□□□□ -0.13
CSNK1E-211ENST00000451964 FPGSQ05932 587 aa14.23□□□□□ -0.13
CSNK1E-211ENST00000451964 APOBRQ0VD83 1088 aa14.23□□□□□ -0.13
CSNK1E-211ENST00000451964 MYSM1Q5VVJ2 828 aa14.23□□□□□ -0.13
CSNK1E-211ENST00000451964 TYW1BQ6NUM6 668 aa14.23□□□□□ -0.13
CSNK1E-211ENST00000451964 BLOC1S2Q6QNY1 142 aa14.23□□□□□ -0.13
CSNK1E-211ENST00000451964 SMARCC2Q8TAQ2 1214 aa14.23□□□□□ -0.13
CSNK1E-211ENST00000451964 BRF1Q92994 677 aa14.23□□□□□ -0.13
CSNK1E-211ENST00000451964 SEZ6LQ9BYH1 1024 aa14.23□□□□□ -0.13
CSNK1E-211ENST00000451964 PSTPIP2Q9H939 334 aa14.23□□□□□ -0.13
CSNK1E-211ENST00000451964 RBM28Q9NW13 759 aaKnown RBP14.23□□□□□ -0.13
CSNK1E-211ENST00000451964 RTEL1Q9NZ71 1219 aa14.23□□□□□ -0.13
CSNK1E-211ENST00000451964 V9GY48 417 aaPredicted RBP14.23□□□□□ -0.13
CSNK1E-211ENST00000451964 GOLGA8AA7E2F4 631 aa14.22□□□□□ -0.13
CSNK1E-211ENST00000451964 GOLGA8BA8MQT2 603 aa14.22□□□□□ -0.13
CSNK1E-211ENST00000451964 CENPBP07199 599 aaPredicted RBP14.22□□□□□ -0.13
CSNK1E-211ENST00000451964 CSF2RAP15509 400 aa14.22□□□□□ -0.13
CSNK1E-211ENST00000451964 SEMA3FQ13275 785 aa14.22□□□□□ -0.13
CSNK1E-211ENST00000451964 LAMC2Q13753 1193 aa14.22□□□□□ -0.13
CSNK1E-211ENST00000451964 UBE2SQ16763 222 aa14.22□□□□□ -0.13
CSNK1E-211ENST00000451964 CELF3Q5SZQ8 465 aaKnown RBP14.22□□□□□ -0.13
CSNK1E-211ENST00000451964 WWC2Q6AWC2 1192 aa14.22□□□□□ -0.13
CSNK1E-211ENST00000451964 HEATR3Q7Z4Q2 680 aa14.22□□□□□ -0.13
CSNK1E-211ENST00000451964 DHX37Q8IY37 1157 aaKnown RBP14.22□□□□□ -0.13
CSNK1E-211ENST00000451964 FBXL16Q8N461 479 aa14.22□□□□□ -0.13
CSNK1E-211ENST00000451964 CUL5Q93034 780 aa14.22□□□□□ -0.13
CSNK1E-211ENST00000451964 INPP4AQ96PE3 977 aaPredicted RBP14.22□□□□□ -0.13
CSNK1E-211ENST00000451964 NOC4LQ9BVI4 516 aaKnown RBP14.22□□□□□ -0.13
CSNK1E-211ENST00000451964 AGXT2Q9BYV1 514 aa14.22□□□□□ -0.13
CSNK1E-211ENST00000451964 LTBP2Q14767 1821 aa14.22□□□□□ -0.13
CSNK1E-211ENST00000451964 SPATA31C2B4DYI2 1134 aa14.21□□□□□ -0.13
CSNK1E-211ENST00000451964 EPB41L2O43491 1005 aaKnown RBP14.21□□□□□ -0.13
CSNK1E-211ENST00000451964 GGPS1O95749 300 aa14.21□□□□□ -0.13
CSNK1E-211ENST00000451964 TGFB3P10600 412 aa14.21□□□□□ -0.13
CSNK1E-211ENST00000451964 CYP2C9P11712 490 aa14.21□□□□□ -0.13
CSNK1E-211ENST00000451964 CASTP20810 708 aaKnown RBP14.21□□□□□ -0.13
CSNK1E-211ENST00000451964 UBA1P22314 1058 aaKnown RBP14.21□□□□□ -0.13
CSNK1E-211ENST00000451964 ICAM3P32942 547 aa14.21□□□□□ -0.13
CSNK1E-211ENST00000451964 RCAN1P53805 252 aa14.21□□□□□ -0.13
CSNK1E-211ENST00000451964 FGD1P98174 961 aa14.21□□□□□ -0.13
CSNK1E-211ENST00000451964 HSDL1Q3SXM5 330 aa14.21□□□□□ -0.13
CSNK1E-211ENST00000451964 KCNV1Q6PIU1 500 aa14.21□□□□□ -0.13
CSNK1E-211ENST00000451964 Q7L0L9 218 aa14.21□□□□□ -0.13
CSNK1E-211ENST00000451964 PPTC7Q8NI37 304 aa14.21□□□□□ -0.13
CSNK1E-211ENST00000451964 HIPK3Q9H422 1215 aa14.21□□□□□ -0.13
CSNK1E-211ENST00000451964 NAP1L2Q9ULW6 460 aaPredicted RBP14.21□□□□□ -0.13
CSNK1E-211ENST00000451964 ACRP10323 421 aa14.2□□□□□ -0.14
CSNK1E-211ENST00000451964 HOXD8P13378 290 aaPredicted RBP14.2□□□□□ -0.14
CSNK1E-211ENST00000451964 PSMA5P28066 241 aa14.2□□□□□ -0.14
CSNK1E-211ENST00000451964 CCL23P55773 120 aa14.2□□□□□ -0.14
CSNK1E-211ENST00000451964 CHMP4BP1P59074 171 aa14.2□□□□□ -0.14
CSNK1E-211ENST00000451964 DGKDQ16760 1214 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms