RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 CCDC47Q96A33 483 aaKnown RBP13.47□□□□□ -0.25
COL27A1-202ENST00000451716 DHTKD1Q96HY7 919 aaPredicted RBP13.47□□□□□ -0.25
COL27A1-202ENST00000451716 CCDC17Q96LX7 622 aa13.47□□□□□ -0.25
COL27A1-202ENST00000451716 EHD4Q9H223 541 aa13.47□□□□□ -0.25
COL27A1-202ENST00000451716 SEMA6BQ9H3T3 888 aa13.47□□□□□ -0.25
COL27A1-202ENST00000451716 MYO3BQ8WXR4 1341 aa13.47□□□□□ -0.25
COL27A1-202ENST00000451716 QSER1Q2KHR3 1735 aa13.47□□□□□ -0.25
COL27A1-202ENST00000451716 TTC36A6NLP5 189 aa13.46□□□□□ -0.25
COL27A1-202ENST00000451716 CCNE1P24864 410 aa13.46□□□□□ -0.25
COL27A1-202ENST00000451716 ICA1Q05084 483 aa13.46□□□□□ -0.25
COL27A1-202ENST00000451716 IKQ13123 557 aaPredicted RBP13.46□□□□□ -0.25
COL27A1-202ENST00000451716 LRRC41Q15345 812 aa13.46□□□□□ -0.25
COL27A1-202ENST00000451716 CDC37Q16543 378 aaPredicted RBP13.46□□□□□ -0.25
COL27A1-202ENST00000451716 USH1GQ495M9 461 aa13.46□□□□□ -0.25
COL27A1-202ENST00000451716 KRT79Q5XKE5 535 aa13.46□□□□□ -0.25
COL27A1-202ENST00000451716 ZNF397Q8NF99 534 aaPredicted RBP13.46□□□□□ -0.25
COL27A1-202ENST00000451716 ZNF507Q8TCN5 953 aa13.46□□□□□ -0.25
COL27A1-202ENST00000451716 PRMT6Q96LA8 375 aaPredicted RBP13.46□□□□□ -0.25
COL27A1-202ENST00000451716 CNOT6LQ96LI5 555 aaKnown RBP13.46□□□□□ -0.25
COL27A1-202ENST00000451716 MAGEF1Q9HAY2 307 aa13.46□□□□□ -0.25
COL27A1-202ENST00000451716 SSBP05455 408 aaKnown RBP eCLIP13.46□□□□□ -0.25
COL27A1-202ENST00000451716 EEF1GP26641 437 aaKnown RBP13.46□□□□□ -0.25
COL27A1-202ENST00000451716 RRP1BQ14684 758 aaKnown RBP13.46□□□□□ -0.25
COL27A1-202ENST00000451716 SPICE1Q8N0Z3 855 aa13.46□□□□□ -0.25
COL27A1-202ENST00000451716 DHX36Q9H2U1 1008 aaKnown RBP13.46□□□□□ -0.25
COL27A1-202ENST00000451716 ZSWIM4Q9H7M6 989 aa13.46□□□□□ -0.25
COL27A1-202ENST00000451716 KANSL2Q9H9L4 492 aa13.46□□□□□ -0.25
COL27A1-202ENST00000451716 TFR2Q9UP52 801 aa13.46□□□□□ -0.25
COL27A1-202ENST00000451716 MYH7BA7E2Y1 1941 aa13.46□□□□□ -0.26
COL27A1-202ENST00000451716 C21orf2O43822 256 aa13.46□□□□□ -0.26
COL27A1-202ENST00000451716 TFRCP02786 760 aaKnown RBP13.46□□□□□ -0.26
COL27A1-202ENST00000451716 MTIF2P46199 727 aaKnown RBP13.46□□□□□ -0.26
COL27A1-202ENST00000451716 ZNF569Q5MCW4 686 aa13.46□□□□□ -0.26
COL27A1-202ENST00000451716 GPIHBP1Q8IV16 184 aa13.46□□□□□ -0.26
COL27A1-202ENST00000451716 UBXN4Q92575 508 aa13.46□□□□□ -0.26
COL27A1-202ENST00000451716 RAD54LQ92698 747 aa13.46□□□□□ -0.26
COL27A1-202ENST00000451716 DDX12PQ92771 950 aa13.46□□□□□ -0.26
COL27A1-202ENST00000451716 MTMR8Q96EF0 704 aa13.46□□□□□ -0.26
COL27A1-202ENST00000451716 CALR3Q96L12 384 aaKnown RBP13.46□□□□□ -0.26
COL27A1-202ENST00000451716 P2RX7Q99572 595 aaKnown RBP13.46□□□□□ -0.26
COL27A1-202ENST00000451716 IDI2Q9BXS1 227 aa13.46□□□□□ -0.26
COL27A1-202ENST00000451716 PDGFDQ9GZP0 370 aaPredicted RBP13.46□□□□□ -0.26
COL27A1-202ENST00000451716 AGPAT5Q9NUQ2 364 aa13.46□□□□□ -0.26
COL27A1-202ENST00000451716 F5H6K3 240 aa13.45□□□□□ -0.26
COL27A1-202ENST00000451716 KLRC3Q07444 240 aa13.45□□□□□ -0.26
COL27A1-202ENST00000451716 RAD51AP2Q09MP3 1159 aa13.45□□□□□ -0.26
COL27A1-202ENST00000451716 PPP4R3AQ6IN85 833 aa13.45□□□□□ -0.26
COL27A1-202ENST00000451716 CNNM4Q6P4Q7 775 aa13.45□□□□□ -0.26
COL27A1-202ENST00000451716 TMTC1Q8IUR5 882 aa13.45□□□□□ -0.26
COL27A1-202ENST00000451716 CCDC51Q96ER9 411 aa13.45□□□□□ -0.26
COL27A1-202ENST00000451716 RAB34Q9BZG1 259 aa13.45□□□□□ -0.26
COL27A1-202ENST00000451716 TRIM10Q9UDY6 481 aa13.45□□□□□ -0.26
COL27A1-202ENST00000451716 PCDHA12Q9UN75 941 aa13.45□□□□□ -0.26
COL27A1-202ENST00000451716 YDJCA8MPS7 323 aa13.45□□□□□ -0.26
COL27A1-202ENST00000451716 GH2P01242 217 aa13.45□□□□□ -0.26
COL27A1-202ENST00000451716 STAT3P40763 770 aa13.45□□□□□ -0.26
COL27A1-202ENST00000451716 MAP3K9P80192 1104 aa13.45□□□□□ -0.26
COL27A1-202ENST00000451716 CACNB1Q02641 598 aaPredicted RBP13.45□□□□□ -0.26
COL27A1-202ENST00000451716 TBC1D8BQ0IIM8 1120 aa13.45□□□□□ -0.26
COL27A1-202ENST00000451716 ORC2Q13416 577 aaPredicted RBP13.45□□□□□ -0.26
COL27A1-202ENST00000451716 ABCB5Q2M3G0 1257 aa13.45□□□□□ -0.26
COL27A1-202ENST00000451716 NBPF9Q3BBW0 867 aa13.45□□□□□ -0.26
COL27A1-202ENST00000451716 PPP1R18Q6NYC8 613 aa13.45□□□□□ -0.26
COL27A1-202ENST00000451716 CYP26C1Q6V0L0 522 aa13.45□□□□□ -0.26
COL27A1-202ENST00000451716 PCMTD1Q96MG8 357 aaPredicted RBP13.45□□□□□ -0.26
COL27A1-202ENST00000451716 DONSONQ9NYP3 566 aa13.45□□□□□ -0.26
COL27A1-202ENST00000451716 TBC1D7Q9P0N9 293 aa13.45□□□□□ -0.26
COL27A1-202ENST00000451716 LUC7L2Q9Y383 392 aaKnown RBP13.45□□□□□ -0.26
COL27A1-202ENST00000451716 MRFAP1Q9Y605 127 aa13.45□□□□□ -0.26
COL27A1-202ENST00000451716 TADA3O75528 432 aa13.44□□□□□ -0.26
COL27A1-202ENST00000451716 GUCY2CP25092 1073 aa13.44□□□□□ -0.26
COL27A1-202ENST00000451716 PDIA5Q14554 519 aa13.44□□□□□ -0.26
COL27A1-202ENST00000451716 NOC4LQ9BVI4 516 aaKnown RBP13.44□□□□□ -0.26
COL27A1-202ENST00000451716 ZNF446Q9NWS9 450 aa13.44□□□□□ -0.26
COL27A1-202ENST00000451716 ATF5Q9Y2D1 282 aaPredicted RBP13.44□□□□□ -0.26
COL27A1-202ENST00000451716 SIPA1L1O43166 1804 aa13.44□□□□□ -0.26
COL27A1-202ENST00000451716 CLRN2A0PK11 232 aa13.44□□□□□ -0.26
COL27A1-202ENST00000451716 BICDL2A1A5D9 508 aa13.44□□□□□ -0.26
COL27A1-202ENST00000451716 RASSF10A6NK89 507 aa13.44□□□□□ -0.26
COL27A1-202ENST00000451716 TCP10L2B9ZVM9 353 aa13.44□□□□□ -0.26
COL27A1-202ENST00000451716 PPIP5K2O43314 1243 aa13.44□□□□□ -0.26
COL27A1-202ENST00000451716 KIF5CO60282 957 aa13.44□□□□□ -0.26
COL27A1-202ENST00000451716 NDUFB10O96000 172 aa13.44□□□□□ -0.26
COL27A1-202ENST00000451716 TRIM21P19474 475 aaKnown RBP13.44□□□□□ -0.26
COL27A1-202ENST00000451716 FECHP22830 423 aa13.44□□□□□ -0.26
COL27A1-202ENST00000451716 PPP2R3AQ06190 1150 aa13.44□□□□□ -0.26
COL27A1-202ENST00000451716 STYK1Q6J9G0 422 aa13.44□□□□□ -0.26
COL27A1-202ENST00000451716 TATDN1Q6P1N9 297 aa13.44□□□□□ -0.26
COL27A1-202ENST00000451716 UNC13DQ70J99 1090 aa13.44□□□□□ -0.26
COL27A1-202ENST00000451716 CSRNP1Q96S65 589 aa13.44□□□□□ -0.26
COL27A1-202ENST00000451716 RASSF4Q9H2L5 321 aa13.44□□□□□ -0.26
COL27A1-202ENST00000451716 NYAP2Q9P242 653 aa13.44□□□□□ -0.26
COL27A1-202ENST00000451716 STK17AQ9UEE5 414 aa13.44□□□□□ -0.26
COL27A1-202ENST00000451716 NPHP3-ACAD11A0A0J9YXS1 232 aa13.43□□□□□ -0.26
COL27A1-202ENST00000451716 E9PMD0 336 aa13.43□□□□□ -0.26
COL27A1-202ENST00000451716 TRIM14Q14142 442 aa13.43□□□□□ -0.26
COL27A1-202ENST00000451716 MIIPQ5JXC2 388 aa13.43□□□□□ -0.26
COL27A1-202ENST00000451716 WDR59Q6PJI9 974 aa13.43□□□□□ -0.26
COL27A1-202ENST00000451716 OR8K1Q8NGG5 319 aa13.43□□□□□ -0.26
COL27A1-202ENST00000451716 C7orf43Q8WVR3 580 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms