RNA–Protein interactions for RNA: ENST00000451343.4

TNXB-203, Transcript of tenascin XB, humanhuman

TSL 1 (best) BASIC

Gene TNXB, Length 3,125 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-203ENST00000451343 DEF6Q9H4E7 631 aa12.78□□□□□ -0.36
TNXB-203ENST00000451343 MED4Q9NPJ6 270 aa12.78□□□□□ -0.36
TNXB-203ENST00000451343 TDP2O95551 362 aa12.78□□□□□ -0.36
TNXB-203ENST00000451343 KIF11P52732 1056 aa12.78□□□□□ -0.36
TNXB-203ENST00000451343 EIF6P56537 245 aaKnown RBP12.78□□□□□ -0.36
TNXB-203ENST00000451343 APBA1Q02410 837 aa12.78□□□□□ -0.36
TNXB-203ENST00000451343 GRB10Q13322 594 aa12.78□□□□□ -0.36
TNXB-203ENST00000451343 CCNI2Q6ZMN8 369 aaPredicted RBP12.78□□□□□ -0.36
TNXB-203ENST00000451343 SND1Q7KZF4 910 aaKnown RBP eCLIP12.78□□□□□ -0.36
TNXB-203ENST00000451343 CREG2Q8IUH2 290 aa12.78□□□□□ -0.36
TNXB-203ENST00000451343 EHBP1Q8NDI1 1231 aa12.78□□□□□ -0.36
TNXB-203ENST00000451343 NOC3LQ8WTT2 800 aaKnown RBP12.78□□□□□ -0.36
TNXB-203ENST00000451343 COA7Q96BR5 231 aa12.78□□□□□ -0.36
TNXB-203ENST00000451343 EYA3Q99504 573 aa12.78□□□□□ -0.36
TNXB-203ENST00000451343 C7orf25Q9BPX7 421 aa12.78□□□□□ -0.36
TNXB-203ENST00000451343 CRACR2AQ9BSW2 395 aa12.78□□□□□ -0.36
TNXB-203ENST00000451343 NUP58Q9BVL2 599 aa12.78□□□□□ -0.36
TNXB-203ENST00000451343 ANKRD2Q9GZV1 360 aa12.78□□□□□ -0.36
TNXB-203ENST00000451343 BLOC1S4Q9NUP1 217 aa12.78□□□□□ -0.36
TNXB-203ENST00000451343 PCDHA13Q9Y5I0 950 aa12.78□□□□□ -0.36
TNXB-203ENST00000451343 CASZ1Q86V15 1759 aa12.78□□□□□ -0.36
TNXB-203ENST00000451343 MYH10P35580 1976 aa12.78□□□□□ -0.36
TNXB-203ENST00000451343 LRRC53A6NM62 1247 aa12.77□□□□□ -0.36
TNXB-203ENST00000451343 BUB1O43683 1085 aa12.77□□□□□ -0.36
TNXB-203ENST00000451343 SLC37A4O43826 429 aa12.77□□□□□ -0.36
TNXB-203ENST00000451343 POLD1P28340 1107 aa12.77□□□□□ -0.36
TNXB-203ENST00000451343 SLC10A5Q5PT55 438 aa12.77□□□□□ -0.36
TNXB-203ENST00000451343 KCNK18Q7Z418 384 aa12.77□□□□□ -0.36
TNXB-203ENST00000451343 MSL3Q8N5Y2 521 aaKnown RBP12.77□□□□□ -0.36
TNXB-203ENST00000451343 ANKS1AQ92625 1134 aa12.77□□□□□ -0.36
TNXB-203ENST00000451343 PURBQ96QR8 312 aaKnown RBP12.77□□□□□ -0.36
TNXB-203ENST00000451343 POLD4Q9HCU8 107 aa12.77□□□□□ -0.36
TNXB-203ENST00000451343 DONSONQ9NYP3 566 aa12.77□□□□□ -0.36
TNXB-203ENST00000451343 SPATA31A6Q5VVP1 1343 aa12.77□□□□□ -0.36
TNXB-203ENST00000451343 USP17L5A8MUK1 530 aa12.77□□□□□ -0.37
TNXB-203ENST00000451343 AKR1B10O60218 316 aa12.77□□□□□ -0.37
TNXB-203ENST00000451343 PRPHP41219 470 aa12.77□□□□□ -0.37
TNXB-203ENST00000451343 KCTD19Q17RG1 926 aaPredicted RBP12.77□□□□□ -0.37
TNXB-203ENST00000451343 MAP9Q49MG5 647 aa12.77□□□□□ -0.37
TNXB-203ENST00000451343 ICE2Q659A1 982 aa12.77□□□□□ -0.37
TNXB-203ENST00000451343 TTC19Q6DKK2 380 aaPredicted RBP12.77□□□□□ -0.37
TNXB-203ENST00000451343 KRT25Q7Z3Z0 450 aa12.77□□□□□ -0.37
TNXB-203ENST00000451343 CCDC170Q8IYT3 715 aa12.77□□□□□ -0.37
TNXB-203ENST00000451343 PNMA5Q96PV4 448 aa12.77□□□□□ -0.37
TNXB-203ENST00000451343 ERGIC2Q96RQ1 377 aa12.77□□□□□ -0.37
TNXB-203ENST00000451343 NDST4Q9H3R1 872 aa12.77□□□□□ -0.37
TNXB-203ENST00000451343 NLRC4Q9NPP4 1024 aa12.77□□□□□ -0.37
TNXB-203ENST00000451343 SNX12Q9UMY4 172 aa12.77□□□□□ -0.37
TNXB-203ENST00000451343 SIK3Q9Y2K2 1263 aa12.77□□□□□ -0.37
TNXB-203ENST00000451343 RPS6KA4O75676 772 aa12.77□□□□□ -0.37
TNXB-203ENST00000451343 MYL1P05976 194 aa12.77□□□□□ -0.37
TNXB-203ENST00000451343 TUBBP07437 444 aa12.77□□□□□ -0.37
TNXB-203ENST00000451343 TM4SF1P30408 202 aa12.77□□□□□ -0.37
TNXB-203ENST00000451343 CDK8P49336 464 aa12.77□□□□□ -0.37
TNXB-203ENST00000451343 AARSP49588 968 aaKnown RBP eCLIP12.77□□□□□ -0.37
TNXB-203ENST00000451343 GFPT1Q06210 699 aaPredicted RBP12.77□□□□□ -0.37
TNXB-203ENST00000451343 ENOX2Q16206 610 aaKnown RBP12.77□□□□□ -0.37
TNXB-203ENST00000451343 VWA3BQ502W6 1294 aa12.77□□□□□ -0.37
TNXB-203ENST00000451343 SOGA3Q5TF21 947 aa12.77□□□□□ -0.37
TNXB-203ENST00000451343 FAM114A1Q8IWE2 563 aa12.77□□□□□ -0.37
TNXB-203ENST00000451343 ZSCAN29Q8IWY8 852 aaPredicted RBP12.77□□□□□ -0.37
TNXB-203ENST00000451343 GOLGA6L1Q8N7Z2 621 aa12.77□□□□□ -0.37
TNXB-203ENST00000451343 CEP95Q96GE4 821 aa12.77□□□□□ -0.37
TNXB-203ENST00000451343 TANGO6Q9C0B7 1094 aa12.77□□□□□ -0.37
TNXB-203ENST00000451343 RASSF4Q9H2L5 321 aa12.77□□□□□ -0.37
TNXB-203ENST00000451343 SH2D4AQ9H788 454 aa12.77□□□□□ -0.37
TNXB-203ENST00000451343 TRPC5Q9UL62 973 aaPredicted RBP12.77□□□□□ -0.37
TNXB-203ENST00000451343 RETREG2Q8NC44 543 aa12.76□□□□□ -0.37
TNXB-203ENST00000451343 CALML4Q96GE6 196 aa12.76□□□□□ -0.37
TNXB-203ENST00000451343 MS4A14Q96JA4 679 aa12.76□□□□□ -0.37
TNXB-203ENST00000451343 C6orf50Q9HD87 102 aa12.76□□□□□ -0.37
TNXB-203ENST00000451343 TBC1D7Q9P0N9 293 aa12.76□□□□□ -0.37
TNXB-203ENST00000451343 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.76□□□□□ -0.37
TNXB-203ENST00000451343 LAD1O00515 517 aa12.76□□□□□ -0.37
TNXB-203ENST00000451343 BTDP43251 543 aa12.76□□□□□ -0.37
TNXB-203ENST00000451343 TRAPPC3LQ5T215 181 aa12.76□□□□□ -0.37
TNXB-203ENST00000451343 SPTY2D1Q68D10 685 aaPredicted RBP12.76□□□□□ -0.37
TNXB-203ENST00000451343 CNNM4Q6P4Q7 775 aa12.76□□□□□ -0.37
TNXB-203ENST00000451343 SV2BQ7L1I2 683 aa12.76□□□□□ -0.37
TNXB-203ENST00000451343 AMOTL1Q8IY63 956 aa12.76□□□□□ -0.37
TNXB-203ENST00000451343 AK8Q96MA6 479 aa12.76□□□□□ -0.37
TNXB-203ENST00000451343 IRS2Q9Y4H2 1338 aa12.76□□□□□ -0.37
TNXB-203ENST00000451343 ANO9A1A5B4 782 aa12.75□□□□□ -0.37
TNXB-203ENST00000451343 TARSL2A2RTX5 802 aaKnown RBP12.75□□□□□ -0.37
TNXB-203ENST00000451343 TACC1O75410 805 aa12.75□□□□□ -0.37
TNXB-203ENST00000451343 IVLP07476 585 aa12.75□□□□□ -0.37
TNXB-203ENST00000451343 RASSF7Q02833 373 aa12.75□□□□□ -0.37
TNXB-203ENST00000451343 REXO1Q8N1G1 1221 aaKnown RBP12.75□□□□□ -0.37
TNXB-203ENST00000451343 LRRC47Q8N1G4 583 aaKnown RBP12.75□□□□□ -0.37
TNXB-203ENST00000451343 VIPAS39Q9H9C1 493 aa12.75□□□□□ -0.37
TNXB-203ENST00000451343 SEC63Q9UGP8 760 aaKnown RBP12.75□□□□□ -0.37
TNXB-203ENST00000451343 NARFQ9UHQ1 456 aa12.75□□□□□ -0.37
TNXB-203ENST00000451343 PLAGL2Q9UPG8 496 aa12.75□□□□□ -0.37
TNXB-203ENST00000451343 MYH1P12882 1939 aa12.75□□□□□ -0.37
TNXB-203ENST00000451343 SNED1Q8TER0 1413 aa12.75□□□□□ -0.37
TNXB-203ENST00000451343 EDIL3O43854 480 aa12.75□□□□□ -0.37
TNXB-203ENST00000451343 SLC1A4P43007 532 aa12.75□□□□□ -0.37
TNXB-203ENST00000451343 NAP1L1P55209 391 aaKnown RBP12.75□□□□□ -0.37
TNXB-203ENST00000451343 CACNB1Q02641 598 aaPredicted RBP12.75□□□□□ -0.37
TNXB-203ENST00000451343 ZKSCAN8Q15776 578 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms