RNA–Protein interactions for RNA: ENST00000450533.5

TTC3-210, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-210ENST00000450533 CCDC66A2RUB6 948 aa24.64■■□□□ 1.53
TTC3-210ENST00000450533 USP17L10C9JJH3 530 aa24.64■■□□□ 1.53
TTC3-210ENST00000450533 MARCH6O60337 910 aa24.64■■□□□ 1.53
TTC3-210ENST00000450533 KIF5AQ12840 1032 aa24.64■■□□□ 1.53
TTC3-210ENST00000450533 ZNF662Q6ZS27 426 aa24.64■■□□□ 1.53
TTC3-210ENST00000450533 CCDC155Q8N6L0 562 aa24.64■■□□□ 1.53
TTC3-210ENST00000450533 HAS1Q92839 578 aa24.64■■□□□ 1.53
TTC3-210ENST00000450533 PPEF1O14829 653 aaPredicted RBP24.63■■□□□ 1.53
TTC3-210ENST00000450533 SHMT1P34896 483 aa24.63■■□□□ 1.53
TTC3-210ENST00000450533 CASP8Q14790 479 aa24.63■■□□□ 1.53
TTC3-210ENST00000450533 DOK7Q18PE1 504 aa24.63■■□□□ 1.53
TTC3-210ENST00000450533 GJD4Q96KN9 370 aaPredicted RBP24.63■■□□□ 1.53
TTC3-210ENST00000450533 PLAGL2Q9UPG8 496 aa24.63■■□□□ 1.53
TTC3-210ENST00000450533 SSBP05455 408 aaKnown RBP eCLIP24.63■■□□□ 1.53
TTC3-210ENST00000450533 VAV2P52735 878 aa24.63■■□□□ 1.53
TTC3-210ENST00000450533 SPA17Q15506 151 aa24.63■■□□□ 1.53
TTC3-210ENST00000450533 MAN2A1Q16706 1144 aa24.63■■□□□ 1.53
TTC3-210ENST00000450533 JADE2Q9NQC1 790 aa24.63■■□□□ 1.53
TTC3-210ENST00000450533 FOCADQ5VW36 1801 aa24.62■■□□□ 1.53
TTC3-210ENST00000450533 TMEM119Q4V9L6 283 aa24.62■■□□□ 1.53
TTC3-210ENST00000450533 CRAMP1Q96RY5 1269 aa24.62■■□□□ 1.53
TTC3-210ENST00000450533 ADAM21Q9UKJ8 722 aa24.62■■□□□ 1.53
TTC3-210ENST00000450533 USP14P54578 494 aa24.62■■□□□ 1.53
TTC3-210ENST00000450533 LRRC55Q6ZSA7 311 aa24.62■■□□□ 1.53
TTC3-210ENST00000450533 CAGE1Q8TC20 777 aa24.62■■□□□ 1.53
TTC3-210ENST00000450533 CUL5Q93034 780 aa24.62■■□□□ 1.53
TTC3-210ENST00000450533 SECISBP2LQ93073 1101 aaKnown RBP24.62■■□□□ 1.53
TTC3-210ENST00000450533 TBC1D7Q9P0N9 293 aa24.62■■□□□ 1.53
TTC3-210ENST00000450533 POLRMTO00411 1230 aaKnown RBP24.61■■□□□ 1.53
TTC3-210ENST00000450533 CLK2P49760 499 aaKnown RBP24.61■■□□□ 1.53
TTC3-210ENST00000450533 CDK17Q00537 523 aa24.61■■□□□ 1.53
TTC3-210ENST00000450533 PPP4R3AQ6IN85 833 aa24.61■■□□□ 1.53
TTC3-210ENST00000450533 RRAGAQ7L523 313 aa24.61■■□□□ 1.53
TTC3-210ENST00000450533 DRC1Q96MC2 740 aa24.61■■□□□ 1.53
TTC3-210ENST00000450533 IFIH1Q9BYX4 1025 aaKnown RBP24.61■■□□□ 1.53
TTC3-210ENST00000450533 TANGO6Q9C0B7 1094 aa24.61■■□□□ 1.53
TTC3-210ENST00000450533 GBP3Q9H0R5 595 aa24.61■■□□□ 1.53
TTC3-210ENST00000450533 VPS18Q9P253 973 aa24.61■■□□□ 1.53
TTC3-210ENST00000450533 LRRC53A6NM62 1247 aa24.61■■□□□ 1.53
TTC3-210ENST00000450533 PDE2AO00408 941 aaPredicted RBP24.61■■□□□ 1.53
TTC3-210ENST00000450533 ZMYND10O75800 440 aa24.61■■□□□ 1.53
TTC3-210ENST00000450533 EIF4A3P38919 411 aaKnown RBP24.61■■□□□ 1.53
TTC3-210ENST00000450533 WDR93Q6P2C0 686 aa24.61■■□□□ 1.53
TTC3-210ENST00000450533 PURBQ96QR8 312 aaKnown RBP24.61■■□□□ 1.53
TTC3-210ENST00000450533 DEF6Q9H4E7 631 aa24.61■■□□□ 1.53
TTC3-210ENST00000450533 PSTPIP2Q9H939 334 aa24.61■■□□□ 1.53
TTC3-210ENST00000450533 MLXIPQ9HAP2 919 aa24.61■■□□□ 1.53
TTC3-210ENST00000450533 UBR3Q6ZT12 1888 aa24.61■■□□□ 1.53
TTC3-210ENST00000450533 LRRIQ3A6PVS8 624 aaPredicted RBP24.6■■□□□ 1.53
TTC3-210ENST00000450533 KIF11P52732 1056 aa24.6■■□□□ 1.53
TTC3-210ENST00000450533 LRRC63Q05C16 580 aa24.6■■□□□ 1.53
TTC3-210ENST00000450533 NFIAQ12857 509 aa24.6■■□□□ 1.53
TTC3-210ENST00000450533 GPS2Q13227 327 aa24.6■■□□□ 1.53
TTC3-210ENST00000450533 COA1Q9GZY4 146 aa24.6■■□□□ 1.53
TTC3-210ENST00000450533 CAPN6Q9Y6Q1 641 aa24.6■■□□□ 1.53
TTC3-210ENST00000450533 USP17L15C9J2P7 530 aa24.6■■□□□ 1.53
TTC3-210ENST00000450533 USP17L13C9JLJ4 530 aa24.6■■□□□ 1.53
TTC3-210ENST00000450533 USP17L11C9JVI0 530 aa24.6■■□□□ 1.53
TTC3-210ENST00000450533 USP17L18D6R9N7 530 aa24.6■■□□□ 1.53
TTC3-210ENST00000450533 USP17L22D6RA61 530 aa24.6■■□□□ 1.53
TTC3-210ENST00000450533 USP17L17D6RBQ6 530 aa24.6■■□□□ 1.53
TTC3-210ENST00000450533 USP17L19D6RCP7 530 aa24.6■■□□□ 1.53
TTC3-210ENST00000450533 USP17L20D6RJB6 530 aa24.6■■□□□ 1.53
TTC3-210ENST00000450533 EHHADHQ08426 723 aa24.6■■□□□ 1.53
TTC3-210ENST00000450533 USP17L24Q0WX57 530 aa24.6■■□□□ 1.53
TTC3-210ENST00000450533 SHROOM1Q2M3G4 852 aaPredicted RBP24.6■■□□□ 1.53
TTC3-210ENST00000450533 USP17L6PQ6QN14 398 aa24.6■■□□□ 1.53
TTC3-210ENST00000450533 DNAJC19Q96DA6 116 aa24.6■■□□□ 1.53
TTC3-210ENST00000450533 FGFBP2Q9BYJ0 223 aa24.6■■□□□ 1.53
TTC3-210ENST00000450533 ZC3H12CQ9C0D7 883 aaKnown RBP24.6■■□□□ 1.53
TTC3-210ENST00000450533 PCDHA12Q9UN75 941 aa24.6■■□□□ 1.53
TTC3-210ENST00000450533 PCDHA13Q9Y5I0 950 aa24.6■■□□□ 1.53
TTC3-210ENST00000450533 FAM196BA6NMK8 535 aa24.59■■□□□ 1.53
TTC3-210ENST00000450533 ZBTB5O15062 677 aa24.59■■□□□ 1.53
TTC3-210ENST00000450533 EIF3JO75822 258 aaKnown RBP24.59■■□□□ 1.53
TTC3-210ENST00000450533 MRPL12P52815 198 aaKnown RBP24.59■■□□□ 1.53
TTC3-210ENST00000450533 CACNB1Q02641 598 aaPredicted RBP24.59■■□□□ 1.53
TTC3-210ENST00000450533 COASYQ13057 564 aa24.59■■□□□ 1.53
TTC3-210ENST00000450533 CDC42EP5Q6NZY7 148 aa24.59■■□□□ 1.53
TTC3-210ENST00000450533 SP8Q8IXZ3 490 aa24.59■■□□□ 1.53
TTC3-210ENST00000450533 FGFR1OPO95684 399 aaKnown RBP24.59■■□□□ 1.53
TTC3-210ENST00000450533 HNRNPH3P31942 346 aaKnown RBP24.59■■□□□ 1.53
TTC3-210ENST00000450533 PPP1R18Q6NYC8 613 aa24.59■■□□□ 1.53
TTC3-210ENST00000450533 ZFPM1Q8IX07 1006 aa24.59■■□□□ 1.53
TTC3-210ENST00000450533 SEPT12Q8IYM1 358 aa24.59■■□□□ 1.53
TTC3-210ENST00000450533 SWAP70Q9UH65 585 aa24.59■■□□□ 1.53
TTC3-210ENST00000450533 MYH7BA7E2Y1 1941 aa24.58■■□□□ 1.53
TTC3-210ENST00000450533 E9PMD0 336 aa24.58■■□□□ 1.53
TTC3-210ENST00000450533 AKR1B10O60218 316 aa24.58■■□□□ 1.53
TTC3-210ENST00000450533 HNRNPH2P55795 449 aaKnown RBP24.58■■□□□ 1.53
TTC3-210ENST00000450533 RAD51AP2Q09MP3 1159 aa24.58■■□□□ 1.53
TTC3-210ENST00000450533 CCDC84Q86UT8 332 aaPredicted RBP24.58■■□□□ 1.53
TTC3-210ENST00000450533 MYOCDQ8IZQ8 938 aa24.58■■□□□ 1.53
TTC3-210ENST00000450533 CCDC102AQ96A19 550 aa24.58■■□□□ 1.53
TTC3-210ENST00000450533 TSG101Q99816 390 aa24.58■■□□□ 1.53
TTC3-210ENST00000450533 HINFPQ9BQA5 517 aa24.58■■□□□ 1.53
TTC3-210ENST00000450533 PHACTR2O75167 634 aa24.58■■□□□ 1.53
TTC3-210ENST00000450533 MOCS3O95396 460 aa24.58■■□□□ 1.53
TTC3-210ENST00000450533 TUBBP07437 444 aa24.58■■□□□ 1.53
TTC3-210ENST00000450533 GDAP1L1Q96MZ0 367 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms