RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 SPA17Q15506 151 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 CFAP221Q4G0U5 840 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 RRP12Q5JTH9 1297 aaKnown RBP9.48□□□□□ -0.89
LSM5-208ENST00000450169 RIC3Q7Z5B4 369 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 MB21D2Q8IYB1 491 aaPredicted RBP9.48□□□□□ -0.89
LSM5-208ENST00000450169 MB21D1Q8N884 522 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 CNBD1Q8NA66 436 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 OR2W6PQ8NHA6 318 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 PRCCQ92733 491 aaPredicted RBP9.48□□□□□ -0.89
LSM5-208ENST00000450169 PHKBQ93100 1093 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 DTNBP1Q96EV8 351 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 BICD1Q96G01 975 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 PAGE5Q96GU1 130 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 EYA1Q99502 592 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 SH2D4AQ9H788 454 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 BLOC1S6Q9UL45 172 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 MAST3O60307 1309 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 AFF2P51816 1311 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 A0A1W2PQC6 194 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 NUTM2BA6NNL0 878 aaPredicted RBP9.48□□□□□ -0.89
LSM5-208ENST00000450169 NUTM2EB1AL46 878 aaPredicted RBP9.48□□□□□ -0.89
LSM5-208ENST00000450169 H0YGN5 161 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 MOCS3O95396 460 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 VIMP08670 466 aaKnown RBP9.48□□□□□ -0.89
LSM5-208ENST00000450169 ABCD1P33897 745 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 CTNNA1P35221 906 aaKnown RBP9.48□□□□□ -0.89
LSM5-208ENST00000450169 TOB1P50616 345 aaPredicted RBP9.48□□□□□ -0.89
LSM5-208ENST00000450169 ANTXR2P58335 489 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 HAND2P61296 217 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 PAK1Q13153 545 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 AGBL2Q5U5Z8 902 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 TRPM8Q7Z2W7 1104 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 CACNA2D4Q7Z3S7 1137 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 DBNDD2Q9BQY9 259 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 CSRNP2Q9H175 543 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 MLXIPQ9HAP2 919 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 ARHGEF10LQ9HCE6 1279 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 ANAPC4Q9UJX5 808 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 AGAP1Q9UPQ3 857 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 TBX22Q9Y458 520 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 SRPRBQ9Y5M8 271 aaKnown RBP9.48□□□□□ -0.89
LSM5-208ENST00000450169 NFS1Q9Y697 457 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 UTYO14607 1347 aa9.48□□□□□ -0.89
LSM5-208ENST00000450169 ZNF142P52746 1687 aaPredicted RBP9.47□□□□□ -0.89
LSM5-208ENST00000450169 FMN2Q9NZ56 1722 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 LGALS16A8MUM7 142 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 PDLIM1O00151 329 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 ECEL1O95672 775 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 METAP2P50579 478 aaKnown RBP eCLIP9.47□□□□□ -0.89
LSM5-208ENST00000450169 TUBP50607 506 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 EIF4A1P60842 406 aaKnown RBP9.47□□□□□ -0.89
LSM5-208ENST00000450169 TFCP2Q12800 502 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 LBRQ14739 615 aaKnown RBP9.47□□□□□ -0.89
LSM5-208ENST00000450169 ANO7Q6IWH7 933 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 KSR2Q6VAB6 950 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 SH3RF1Q7Z6J0 888 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 RALYLQ86SE5 291 aaKnown RBP9.47□□□□□ -0.89
LSM5-208ENST00000450169 LMNTD2Q8IXW0 634 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 CCDC155Q8N6L0 562 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.47□□□□□ -0.89
LSM5-208ENST00000450169 XPO6Q96QU8 1125 aaKnown RBP9.47□□□□□ -0.89
LSM5-208ENST00000450169 IFIH1Q9BYX4 1025 aaKnown RBP9.47□□□□□ -0.89
LSM5-208ENST00000450169 CNOT10Q9H9A5 744 aaKnown RBP9.47□□□□□ -0.89
LSM5-208ENST00000450169 CWC25Q9NXE8 425 aaPredicted RBP9.47□□□□□ -0.89
LSM5-208ENST00000450169 NOVA2Q9UNW9 492 aaKnown RBP9.47□□□□□ -0.89
LSM5-208ENST00000450169 ZNF232Q9UNY5 417 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 A0A087X0B3 334 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 ASAP2O43150 1006 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 NCK2O43639 380 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 CTNND1O60716 968 aaKnown RBP9.47□□□□□ -0.89
LSM5-208ENST00000450169 TPP2P29144 1249 aaPredicted RBP9.47□□□□□ -0.89
LSM5-208ENST00000450169 MAGOHP61326 146 aaKnown RBP9.47□□□□□ -0.89
LSM5-208ENST00000450169 DYNC1I2Q13409 638 aaKnown RBP9.47□□□□□ -0.89
LSM5-208ENST00000450169 ADAM9Q13443 819 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 SGSM1Q2NKQ1 1148 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 TMEM259Q4ZIN3 620 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 RILPL1Q5EBL4 403 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 ERMARDQ5T6L9 678 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 RRAGBQ5VZM2 374 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 PPP2R2DQ66LE6 453 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 MAEAQ7L5Y9 396 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 SLAIN1Q8ND83 568 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 LINS1Q8NG48 757 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 NCOA7Q8NI08 942 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 PTCD2Q8WV60 388 aaKnown RBP9.47□□□□□ -0.89
LSM5-208ENST00000450169 SPIRE2Q8WWL2 714 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 MAGOHBQ96A72 148 aaKnown RBP9.47□□□□□ -0.89
LSM5-208ENST00000450169 MS4A14Q96JA4 679 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 FAM129AQ9BZQ8 928 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 STRN4Q9NRL3 753 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 AGPAT5Q9NUQ2 364 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 RNF14Q9UBS8 474 aa9.47□□□□□ -0.89
LSM5-208ENST00000450169 IQSEC3Q9UPP2 1182 aaPredicted RBP9.47□□□□□ -0.89
LSM5-208ENST00000450169 CPDO75976 1380 aa9.46□□□□□ -0.89
LSM5-208ENST00000450169 ABCC12Q96J65 1359 aa9.46□□□□□ -0.89
LSM5-208ENST00000450169 DDX60Q8IY21 1712 aaKnown RBP9.46□□□□□ -0.89
LSM5-208ENST00000450169 NALCNQ8IZF0 1738 aa9.46□□□□□ -0.89
LSM5-208ENST00000450169 A8MUI8 341 aa9.46□□□□□ -0.9
LSM5-208ENST00000450169 IGF2BP3O00425 579 aaKnown RBP eCLIP9.46□□□□□ -0.9
LSM5-208ENST00000450169 ZNF263O14978 683 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms