RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 AP5Z1O43299 807 aa16.04■□□□□ 0.16
USP39-207ENST00000450066 SLC26A4O43511 780 aa16.04■□□□□ 0.16
USP39-207ENST00000450066 CASP1P29466 404 aa16.04■□□□□ 0.16
USP39-207ENST00000450066 CUL4BQ13620 913 aa16.04■□□□□ 0.16
USP39-207ENST00000450066 MOB2Q70IA6 237 aa16.04■□□□□ 0.16
USP39-207ENST00000450066 STK17AQ9UEE5 414 aa16.04■□□□□ 0.16
USP39-207ENST00000450066 ZNF214Q9UL59 606 aaPredicted RBP16.04■□□□□ 0.16
USP39-207ENST00000450066 RPTORQ8N122 1335 aa16.04■□□□□ 0.16
USP39-207ENST00000450066 A0A0G2JLL6 359 aaPredicted RBP16.03■□□□□ 0.16
USP39-207ENST00000450066 SPDYE16A6NNV3 312 aaPredicted RBP16.03■□□□□ 0.16
USP39-207ENST00000450066 SMTNL1A8MU46 457 aa16.03■□□□□ 0.16
USP39-207ENST00000450066 MSH4O15457 936 aa16.03■□□□□ 0.16
USP39-207ENST00000450066 PLCB2Q00722 1185 aa16.03■□□□□ 0.16
USP39-207ENST00000450066 GRB10Q13322 594 aa16.03■□□□□ 0.16
USP39-207ENST00000450066 PRRT2Q7Z6L0 340 aaPredicted RBP16.03■□□□□ 0.16
USP39-207ENST00000450066 PROCA1Q8NCQ7 364 aaPredicted RBP16.03■□□□□ 0.16
USP39-207ENST00000450066 CYP2W1Q8TAV3 490 aa16.03■□□□□ 0.16
USP39-207ENST00000450066 SNX29Q8TEQ0 813 aa16.03■□□□□ 0.16
USP39-207ENST00000450066 LRRC15Q8TF66 581 aa16.03■□□□□ 0.16
USP39-207ENST00000450066 OTUD5Q96G74 571 aa16.03■□□□□ 0.16
USP39-207ENST00000450066 CDK5RAP3Q96JB5 506 aa16.03■□□□□ 0.16
USP39-207ENST00000450066 PNMA5Q96PV4 448 aa16.03■□□□□ 0.16
USP39-207ENST00000450066 BLZF1Q9H2G9 400 aa16.03■□□□□ 0.16
USP39-207ENST00000450066 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.03■□□□□ 0.16
USP39-207ENST00000450066 CLEC11AQ9Y240 323 aa16.03■□□□□ 0.16
USP39-207ENST00000450066 PTPRFP10586 1907 aa16.03■□□□□ 0.16
USP39-207ENST00000450066 SPIRE1Q08AE8 756 aa16.03■□□□□ 0.16
USP39-207ENST00000450066 PPIL2Q13356 520 aa16.03■□□□□ 0.16
USP39-207ENST00000450066 TMEM132BQ14DG7 1078 aa16.03■□□□□ 0.16
USP39-207ENST00000450066 CEP55Q53EZ4 464 aa16.03■□□□□ 0.16
USP39-207ENST00000450066 CT47A1Q5JQC4 288 aaPredicted RBP16.03■□□□□ 0.16
USP39-207ENST00000450066 TREML2Q5T2D2 321 aa16.03■□□□□ 0.16
USP39-207ENST00000450066 SNRNP48Q6IEG0 339 aaKnown RBP16.03■□□□□ 0.16
USP39-207ENST00000450066 SYTL5Q8TDW5 730 aaPredicted RBP16.03■□□□□ 0.16
USP39-207ENST00000450066 TEX13BQ9BXU2 312 aa16.03■□□□□ 0.16
USP39-207ENST00000450066 RNF146Q9NTX7 359 aa16.03■□□□□ 0.16
USP39-207ENST00000450066 RMND1Q9NWS8 449 aa16.03■□□□□ 0.16
USP39-207ENST00000450066 COL20A1Q9P218 1284 aa16.03■□□□□ 0.16
USP39-207ENST00000450066 KCNH4Q9UQ05 1017 aa16.03■□□□□ 0.16
USP39-207ENST00000450066 RIPK3Q9Y572 518 aa16.03■□□□□ 0.16
USP39-207ENST00000450066 HOXA7P31268 230 aaPredicted RBP16.02■□□□□ 0.15
USP39-207ENST00000450066 RPS6P62753 249 aaKnown RBP16.02■□□□□ 0.15
USP39-207ENST00000450066 SEMA3FQ13275 785 aa16.02■□□□□ 0.15
USP39-207ENST00000450066 TKFCQ3LXA3 575 aa16.02■□□□□ 0.15
USP39-207ENST00000450066 TMEM119Q4V9L6 283 aa16.02■□□□□ 0.15
USP39-207ENST00000450066 HYIQ5T013 277 aa16.02■□□□□ 0.15
USP39-207ENST00000450066 LDLRAD1Q5T700 205 aa16.02■□□□□ 0.15
USP39-207ENST00000450066 RNF207Q6ZRF8 634 aa16.02■□□□□ 0.15
USP39-207ENST00000450066 MAF1Q9H063 256 aa16.02■□□□□ 0.15
USP39-207ENST00000450066 STK24Q9Y6E0 443 aa16.02■□□□□ 0.15
USP39-207ENST00000450066 FRMPD4Q14CM0 1322 aa16.02■□□□□ 0.15
USP39-207ENST00000450066 RBBP6Q7Z6E9 1792 aaKnown RBP16.02■□□□□ 0.15
USP39-207ENST00000450066 LOC285556D6RIA3 1793 aa16.01■□□□□ 0.15
USP39-207ENST00000450066 UNCXA6NJT0 531 aa16.01■□□□□ 0.15
USP39-207ENST00000450066 MEIS1O00470 390 aa16.01■□□□□ 0.15
USP39-207ENST00000450066 UBXN2AP68543 259 aa16.01■□□□□ 0.15
USP39-207ENST00000450066 SETQ01105 290 aaPredicted RBP16.01■□□□□ 0.15
USP39-207ENST00000450066 AMPD3Q01432 767 aa16.01■□□□□ 0.15
USP39-207ENST00000450066 NCAPHQ15003 741 aa16.01■□□□□ 0.15
USP39-207ENST00000450066 SARM1Q6SZW1 724 aa16.01■□□□□ 0.15
USP39-207ENST00000450066 NUDT12Q9BQG2 462 aa16.01■□□□□ 0.15
USP39-207ENST00000450066 NT5C3AQ9H0P0 336 aa16.01■□□□□ 0.15
USP39-207ENST00000450066 KDM3AQ9Y4C1 1321 aa16.01■□□□□ 0.15
USP39-207ENST00000450066 COL11A1P12107 1806 aaPredicted RBP16.01■□□□□ 0.15
USP39-207ENST00000450066 RPN1P04843 607 aaKnown RBP16.01■□□□□ 0.15
USP39-207ENST00000450066 POTEIP0CG38 1075 aa16.01■□□□□ 0.15
USP39-207ENST00000450066 POTEJP0CG39 1038 aa16.01■□□□□ 0.15
USP39-207ENST00000450066 TPM4P67936 248 aa16.01■□□□□ 0.15
USP39-207ENST00000450066 MYL5Q02045 173 aa16.01■□□□□ 0.15
USP39-207ENST00000450066 PLA2G4DQ86XP0 818 aa16.01■□□□□ 0.15
USP39-207ENST00000450066 UIMC1Q96RL1 719 aa16.01■□□□□ 0.15
USP39-207ENST00000450066 BLOC1S4Q9NUP1 217 aa16.01■□□□□ 0.15
USP39-207ENST00000450066 VAV3Q9UKW4 847 aa16.01■□□□□ 0.15
USP39-207ENST00000450066 ERCC5P28715 1186 aaPredicted RBP16■□□□□ 0.15
USP39-207ENST00000450066 STAT3P40763 770 aa16■□□□□ 0.15
USP39-207ENST00000450066 PCNX4Q63HM2 1172 aa16■□□□□ 0.15
USP39-207ENST00000450066 MAP1SQ66K74 1059 aaPredicted RBP16■□□□□ 0.15
USP39-207ENST00000450066 HAUS3Q68CZ6 603 aa16■□□□□ 0.15
USP39-207ENST00000450066 SLC30A10Q6XR72 485 aa16■□□□□ 0.15
USP39-207ENST00000450066 GADL1Q6ZQY3 521 aa16■□□□□ 0.15
USP39-207ENST00000450066 SV2BQ7L1I2 683 aa16■□□□□ 0.15
USP39-207ENST00000450066 SLC5A5Q92911 643 aa16■□□□□ 0.15
USP39-207ENST00000450066 TRIM44Q96DX7 344 aaPredicted RBP16■□□□□ 0.15
USP39-207ENST00000450066 C7orf25Q9BPX7 421 aa16■□□□□ 0.15
USP39-207ENST00000450066 BCRP11274 1271 aa15.99■□□□□ 0.15
USP39-207ENST00000450066 CCT6AP40227 531 aaKnown RBP15.99■□□□□ 0.15
USP39-207ENST00000450066 KCNB1Q14721 858 aa15.99■□□□□ 0.15
USP39-207ENST00000450066 NSMFQ6X4W1 530 aa15.99■□□□□ 0.15
USP39-207ENST00000450066 NIPA1Q7RTP0 329 aa15.99■□□□□ 0.15
USP39-207ENST00000450066 MB21D1Q8N884 522 aa15.99■□□□□ 0.15
USP39-207ENST00000450066 ERMNQ8TAM6 284 aa15.99■□□□□ 0.15
USP39-207ENST00000450066 LARP4BQ92615 738 aaKnown RBP15.99■□□□□ 0.15
USP39-207ENST00000450066 RAD54LQ92698 747 aa15.99■□□□□ 0.15
USP39-207ENST00000450066 OPTNQ96CV9 577 aa15.99■□□□□ 0.15
USP39-207ENST00000450066 MXRA8Q9BRK3 442 aa15.99■□□□□ 0.15
USP39-207ENST00000450066 TRIM9Q9C026 710 aa15.99■□□□□ 0.15
USP39-207ENST00000450066 ECM1Q16610 540 aa15.99■□□□□ 0.15
USP39-207ENST00000450066 LBX2Q6XYB7 198 aa15.99■□□□□ 0.15
USP39-207ENST00000450066 TAAR1Q96RJ0 339 aa15.99■□□□□ 0.15
USP39-207ENST00000450066 TRIM5Q9C035 493 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms