RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.56□□□□□ -0.4
SYVN1-204ENST00000449943 TRIM58Q8NG06 486 aa12.56□□□□□ -0.4
SYVN1-204ENST00000449943 LARP4BQ92615 738 aaKnown RBP12.56□□□□□ -0.4
SYVN1-204ENST00000449943 ERGIC2Q96RQ1 377 aa12.56□□□□□ -0.4
SYVN1-204ENST00000449943 GPCPD1Q9NPB8 672 aa12.56□□□□□ -0.4
SYVN1-204ENST00000449943 FAM182BQ5T319 152 aa12.56□□□□□ -0.4
SYVN1-204ENST00000449943 SRLQ86TD4 932 aa12.56□□□□□ -0.4
SYVN1-204ENST00000449943 CLEC10AQ8IUN9 316 aa12.56□□□□□ -0.4
SYVN1-204ENST00000449943 LRRC1Q9BTT6 524 aa12.56□□□□□ -0.4
SYVN1-204ENST00000449943 SPZ1Q9BXG8 430 aa12.56□□□□□ -0.4
SYVN1-204ENST00000449943 SNX12Q9UMY4 172 aa12.56□□□□□ -0.4
SYVN1-204ENST00000449943 ANO9A1A5B4 782 aa12.55□□□□□ -0.4
SYVN1-204ENST00000449943 PICALMQ13492 652 aa12.55□□□□□ -0.4
SYVN1-204ENST00000449943 TMEM266Q2M3C6 531 aa12.55□□□□□ -0.4
SYVN1-204ENST00000449943 LRRC31Q6UY01 552 aa12.55□□□□□ -0.4
SYVN1-204ENST00000449943 CCNI2Q6ZMN8 369 aaPredicted RBP12.55□□□□□ -0.4
SYVN1-204ENST00000449943 TMC4Q7Z404 712 aa12.55□□□□□ -0.4
SYVN1-204ENST00000449943 RAB34Q9BZG1 259 aa12.55□□□□□ -0.4
SYVN1-204ENST00000449943 RASSF4Q9H2L5 321 aa12.55□□□□□ -0.4
SYVN1-204ENST00000449943 MAGEA1P43355 309 aa12.55□□□□□ -0.4
SYVN1-204ENST00000449943 RASSF7Q02833 373 aa12.55□□□□□ -0.4
SYVN1-204ENST00000449943 GFPT1Q06210 699 aaPredicted RBP12.55□□□□□ -0.4
SYVN1-204ENST00000449943 MSL3Q8N5Y2 521 aaKnown RBP12.55□□□□□ -0.4
SYVN1-204ENST00000449943 NUDT12Q9BQG2 462 aa12.55□□□□□ -0.4
SYVN1-204ENST00000449943 SH2D4AQ9H788 454 aa12.55□□□□□ -0.4
SYVN1-204ENST00000449943 KIAA1551Q9HCM1 1747 aa12.55□□□□□ -0.4
SYVN1-204ENST00000449943 JRKLQ9Y4A0 524 aa12.55□□□□□ -0.4
SYVN1-204ENST00000449943 TARSL2A2RTX5 802 aaKnown RBP12.55□□□□□ -0.4
SYVN1-204ENST00000449943 GOLGA6BA6NDN3 693 aa12.55□□□□□ -0.4
SYVN1-204ENST00000449943 ARID5AQ03989 594 aa12.55□□□□□ -0.4
SYVN1-204ENST00000449943 AMIGO3Q86WK7 504 aa12.55□□□□□ -0.4
SYVN1-204ENST00000449943 ALS2CR12Q96Q35 445 aa12.55□□□□□ -0.4
SYVN1-204ENST00000449943 BLOC1S4Q9NUP1 217 aa12.55□□□□□ -0.4
SYVN1-204ENST00000449943 LAMB1P07942 1786 aa12.55□□□□□ -0.4
SYVN1-204ENST00000449943 ZNF76P36508 570 aa12.54□□□□□ -0.4
SYVN1-204ENST00000449943 DNAJC21Q5F1R6 531 aaKnown RBP12.54□□□□□ -0.4
SYVN1-204ENST00000449943 PNMA5Q96PV4 448 aa12.54□□□□□ -0.4
SYVN1-204ENST00000449943 VIPAS39Q9H9C1 493 aa12.54□□□□□ -0.4
SYVN1-204ENST00000449943 KANSL2Q9H9L4 492 aa12.54□□□□□ -0.4
SYVN1-204ENST00000449943 COL22A1Q8NFW1 1626 aaPredicted RBP12.54□□□□□ -0.4
SYVN1-204ENST00000449943 TM4SF1P30408 202 aa12.54□□□□□ -0.4
SYVN1-204ENST00000449943 MAN2A1Q16706 1144 aa12.54□□□□□ -0.4
SYVN1-204ENST00000449943 UBE2SQ16763 222 aa12.54□□□□□ -0.4
SYVN1-204ENST00000449943 CREG2Q8IUH2 290 aa12.54□□□□□ -0.4
SYVN1-204ENST00000449943 RTFDC1Q9BY42 306 aaPredicted RBP12.54□□□□□ -0.4
SYVN1-204ENST00000449943 DMGDHQ9UI17 866 aaKnown RBP12.54□□□□□ -0.4
SYVN1-204ENST00000449943 PLAGL2Q9UPG8 496 aa12.54□□□□□ -0.4
SYVN1-204ENST00000449943 SPATA31A5Q5VU36 1347 aa12.54□□□□□ -0.4
SYVN1-204ENST00000449943 SPATA31A7Q8IWB4 1347 aa12.54□□□□□ -0.4
SYVN1-204ENST00000449943 A0A1W2PQJ5 194 aa12.54□□□□□ -0.4
SYVN1-204ENST00000449943 CCDC40Q4G0X9 1142 aa12.54□□□□□ -0.4
SYVN1-204ENST00000449943 CENPPQ6IPU0 288 aa12.54□□□□□ -0.4
SYVN1-204ENST00000449943 UNC13DQ70J99 1090 aa12.54□□□□□ -0.4
SYVN1-204ENST00000449943 OSBPL9Q96SU4 736 aa12.54□□□□□ -0.4
SYVN1-204ENST00000449943 SIK3Q9Y2K2 1263 aa12.54□□□□□ -0.4
SYVN1-204ENST00000449943 COL16A1Q07092 1604 aaPredicted RBP12.54□□□□□ -0.4
SYVN1-204ENST00000449943 UFL1O94874 794 aa12.54□□□□□ -0.4
SYVN1-204ENST00000449943 PPP1R2P41236 205 aa12.54□□□□□ -0.4
SYVN1-204ENST00000449943 ADCY7P51828 1080 aa12.54□□□□□ -0.4
SYVN1-204ENST00000449943 CACNB1Q02641 598 aaPredicted RBP12.54□□□□□ -0.4
SYVN1-204ENST00000449943 KRT79Q5XKE5 535 aa12.54□□□□□ -0.4
SYVN1-204ENST00000449943 KCNK18Q7Z418 384 aa12.54□□□□□ -0.4
SYVN1-204ENST00000449943 DDX12PQ92771 950 aa12.54□□□□□ -0.4
SYVN1-204ENST00000449943 PURBQ96QR8 312 aaKnown RBP12.54□□□□□ -0.4
SYVN1-204ENST00000449943 NELFCDQ8IXH7 590 aa12.53□□□□□ -0.4
SYVN1-204ENST00000449943 FNBP4Q8N3X1 1017 aaPredicted RBP12.53□□□□□ -0.4
SYVN1-204ENST00000449943 SPATA4Q8NEY3 305 aa12.53□□□□□ -0.4
SYVN1-204ENST00000449943 TSG101Q99816 390 aa12.53□□□□□ -0.4
SYVN1-204ENST00000449943 TSPYL1Q9H0U9 437 aa12.53□□□□□ -0.4
SYVN1-204ENST00000449943 ROBO3Q96MS0 1386 aa12.53□□□□□ -0.4
SYVN1-204ENST00000449943 GOLGA6CA6NDK9 693 aa12.53□□□□□ -0.4
SYVN1-204ENST00000449943 GOLGA6DP0CG33 693 aa12.53□□□□□ -0.4
SYVN1-204ENST00000449943 AARSP49588 968 aaKnown RBP eCLIP12.53□□□□□ -0.4
SYVN1-204ENST00000449943 TTC19Q6DKK2 380 aaPredicted RBP12.53□□□□□ -0.4
SYVN1-204ENST00000449943 ZNF662Q6ZS27 426 aa12.53□□□□□ -0.4
SYVN1-204ENST00000449943 NEDD1Q8NHV4 660 aa12.53□□□□□ -0.4
SYVN1-204ENST00000449943 ZHX3Q9H4I2 956 aa12.53□□□□□ -0.4
SYVN1-204ENST00000449943 GOLGA6AQ9NYA3 693 aa12.53□□□□□ -0.4
SYVN1-204ENST00000449943 STRCQ7RTU9 1775 aa12.53□□□□□ -0.4
SYVN1-204ENST00000449943 TRAF5O00463 557 aa12.53□□□□□ -0.4
SYVN1-204ENST00000449943 PRPF6O94906 941 aaKnown RBP12.53□□□□□ -0.4
SYVN1-204ENST00000449943 SLC1A4P43007 532 aa12.53□□□□□ -0.4
SYVN1-204ENST00000449943 APBA1Q02410 837 aa12.53□□□□□ -0.4
SYVN1-204ENST00000449943 C16orf86Q6ZW13 317 aa12.53□□□□□ -0.4
SYVN1-204ENST00000449943 MS4A14Q96JA4 679 aa12.53□□□□□ -0.4
SYVN1-204ENST00000449943 HYOU1Q9Y4L1 999 aa12.53□□□□□ -0.4
SYVN1-204ENST00000449943 F8W031 263 aaPredicted RBP12.52□□□□□ -0.4
SYVN1-204ENST00000449943 RNASE9P60153 205 aaKnown RBP12.52□□□□□ -0.4
SYVN1-204ENST00000449943 FAM76AQ8TAV0 307 aa12.52□□□□□ -0.4
SYVN1-204ENST00000449943 ARHGEF1Q92888 912 aaKnown RBP12.52□□□□□ -0.4
SYVN1-204ENST00000449943 SALL4Q9UJQ4 1053 aa12.52□□□□□ -0.4
SYVN1-204ENST00000449943 TRPC5Q9UL62 973 aaPredicted RBP12.52□□□□□ -0.4
SYVN1-204ENST00000449943 RPS6KA4O75676 772 aa12.52□□□□□ -0.4
SYVN1-204ENST00000449943 FGFR1OPO95684 399 aaKnown RBP12.52□□□□□ -0.4
SYVN1-204ENST00000449943 PAFAH1B1P43034 410 aa12.52□□□□□ -0.4
SYVN1-204ENST00000449943 FIGNQ5HY92 759 aa12.52□□□□□ -0.4
SYVN1-204ENST00000449943 RAD54LQ92698 747 aa12.52□□□□□ -0.4
SYVN1-204ENST00000449943 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.52□□□□□ -0.4
SYVN1-204ENST00000449943 FAM184BQ9ULE4 1060 aa12.52□□□□□ -0.4
SYVN1-204ENST00000449943 SNED1Q8TER0 1413 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms